Protein–RNA interactions for Protein: P38798

NMD2, Nonsense-mediated mRNA decay protein 2, yeastyeast

Known RBP Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NMD2P38798 YCR081C-AYCR081C-A 237 nt3.67□□□□□ -1.82
NMD2P38798 YIL175WYIL175W 318 nt3.67□□□□□ -1.82
NMD2P38798 YJL222W-BYJL222W-B 138 nt3.67□□□□□ -1.82
NMD2P38798 PAU23YLR037C 375 nt3.67□□□□□ -1.82
NMD2P38798 APC2YLR127C 2562 nt3.67□□□□□ -1.82
NMD2P38798 CHS2YBR038W 2892 nt3.67□□□□□ -1.82
NMD2P38798 COG3YER157W 2406 nt3.66□□□□□ -1.82
NMD2P38798 NET1YJL076W 3570 nt3.66□□□□□ -1.82
NMD2P38798 AHC2YCR082W 387 nt3.66□□□□□ -1.82
NMD2P38798 RPF1YHR088W 888 nt3.66□□□□□ -1.82
NMD2P38798 YLR379WYLR379W 375 nt3.66□□□□□ -1.82
NMD2P38798 ATX2YOR079C 942 nt3.66□□□□□ -1.82
NMD2P38798 YBR209WYBR209W 318 nt3.66□□□□□ -1.82
NMD2P38798 SNF12YNR023W 1701 nt3.66□□□□□ -1.82
NMD2P38798 YOR296WYOR296W 3870 nt3.66□□□□□ -1.82
NMD2P38798 SRC1YML034W 2505 nt3.65□□□□□ -1.83
NMD2P38798 YHL006W-AYHL006W-A 354 nt3.65□□□□□ -1.83
NMD2P38798 ARV1YLR242C 966 nt3.65□□□□□ -1.83
NMD2P38798 YHC1YLR298C 696 nt3.65□□□□□ -1.83
NMD2P38798 YNL146C-AYNL146C-A 195 nt3.65□□□□□ -1.83
NMD2P38798 NPR1YNL183C 2373 nt3.65□□□□□ -1.83
NMD2P38798 YSP2YDR326C 4317 nt3.64□□□□□ -1.83
NMD2P38798 TRM2YKR056W 1920 nt3.64□□□□□ -1.83
NMD2P38798 SPB1YCL054W 2526 nt3.64□□□□□ -1.83
NMD2P38798 MRH1YDR033W 963 nt3.64□□□□□ -1.83
NMD2P38798 YEL030C-AYEL030C-A 315 nt3.64□□□□□ -1.83
NMD2P38798 YGR107WYGR107W 450 nt3.64□□□□□ -1.83
NMD2P38798 YJL007CYJL007C 315 nt3.64□□□□□ -1.83
NMD2P38798 YMR316C-AYMR316C-A 312 nt3.64□□□□□ -1.83
NMD2P38798 NMD2YHR077C 3270 nt3.64□□□□□ -1.83
NMD2P38798 SPO14YKR031C 5052 nt3.63□□□□□ -1.83
NMD2P38798 RTR2YDR066C 591 nt3.63□□□□□ -1.83
NMD2P38798 YHR130CYHR130C 336 nt3.63□□□□□ -1.83
NMD2P38798 SPC1YJR010C-A 285 nt3.63□□□□□ -1.83
NMD2P38798 RPL20AYMR242C 519 nt3.63□□□□□ -1.83
NMD2P38798 PBI2YNL015W 228 nt3.63□□□□□ -1.83
NMD2P38798 YNR021WYNR021W 1215 nt3.63□□□□□ -1.83
NMD2P38798 PEP12YOR036W 867 nt3.63□□□□□ -1.83
NMD2P38798 BUD21YOR078W 645 nt3.63□□□□□ -1.83
NMD2P38798 SPC29YPL124W 762 nt3.63□□□□□ -1.83
NMD2P38798 ISU1YPL135W 498 nt3.63□□□□□ -1.83
NMD2P38798 RRD2YPL152W 1077 nt3.63□□□□□ -1.83
NMD2P38798 PSY2YNL201C 2577 nt3.63□□□□□ -1.83
NMD2P38798 UBP16YPL072W 1500 nt3.63□□□□□ -1.83
NMD2P38798 PUF6YDR496C 1971 nt3.62□□□□□ -1.83
NMD2P38798 YER038W-AYER038W-A 381 nt3.62□□□□□ -1.83
NMD2P38798 RPL29YFR032C-A 180 nt3.62□□□□□ -1.83
NMD2P38798 YGR018CYGR018C 330 nt3.62□□□□□ -1.83
NMD2P38798 GPI15YNL038W 690 nt3.62□□□□□ -1.83
NMD2P38798 ARR2YPR200C 393 nt3.62□□□□□ -1.83
NMD2P38798 RLF2YPR018W 1821 nt3.62□□□□□ -1.83
NMD2P38798 DBP10YDL031W 2988 nt3.62□□□□□ -1.83
NMD2P38798 RGC1YPR115W 3252 nt3.62□□□□□ -1.83
NMD2P38798 PAM1YDR251W 2493 nt3.62□□□□□ -1.83
NMD2P38798 CCT7YJL111W 1653 nt3.62□□□□□ -1.83
NMD2P38798 FUN30YAL019W 3396 nt3.62□□□□□ -1.83
NMD2P38798 HEH2YDR458C 1992 nt3.62□□□□□ -1.83
NMD2P38798 YAP3YHL009C 993 nt3.61□□□□□ -1.83
NMD2P38798 LSM2YBL026W 288 nt3.61□□□□□ -1.83
NMD2P38798 YNL046WYNL046W 519 nt3.61□□□□□ -1.83
NMD2P38798 HSP10YOR020C 321 nt3.61□□□□□ -1.83
NMD2P38798 TSC11YER093C 4293 nt3.61□□□□□ -1.83
NMD2P38798 PPH3YDR075W 927 nt3.6□□□□□ -1.83
NMD2P38798 VAC8YEL013W 1737 nt3.6□□□□□ -1.83
NMD2P38798 NPR3YHL023C 3441 nt3.6□□□□□ -1.83
NMD2P38798 RPA190YOR341W 4995 nt3.6□□□□□ -1.83
NMD2P38798 ASM4YDL088C 1587 nt3.59□□□□□ -1.83
NMD2P38798 TIF35YDR429C 825 nt3.59□□□□□ -1.83
NMD2P38798 RPS17BYDR447C 411 nt3.59□□□□□ -1.83
NMD2P38798 RAD6YGL058W 519 nt3.59□□□□□ -1.83
NMD2P38798 ERV1YGR029W 570 nt3.59□□□□□ -1.83
NMD2P38798 FYV4YHR059W 393 nt3.59□□□□□ -1.83
NMD2P38798 YLR012CYLR012C 300 nt3.59□□□□□ -1.83
NMD2P38798 APC9YLR102C 798 nt3.59□□□□□ -1.83
NMD2P38798 RUF22RUF22 515 nt3.59□□□□□ -1.83
NMD2P38798 ESF2YNR054C 951 nt3.59□□□□□ -1.83
NMD2P38798 YPL080CYPL080C 327 nt3.59□□□□□ -1.83
NMD2P38798 YPL205CYPL205C 345 nt3.59□□□□□ -1.83
NMD2P38798 NSL1YPL233W 651 nt3.59□□□□□ -1.83
NMD2P38798 YOR192C-AYOR192C-A 1317 nt3.59□□□□□ -1.83
NMD2P38798 DRS2YAL026C 4068 nt3.59□□□□□ -1.83
NMD2P38798 MDM1YML104C 3384 nt3.59□□□□□ -1.84
NMD2P38798 ITC1YGL133W 3795 nt3.58□□□□□ -1.84
NMD2P38798 COX13YGL191W 390 nt3.58□□□□□ -1.84
NMD2P38798 SYM1YLR251W 594 nt3.58□□□□□ -1.84
NMD2P38798 CTK3YML112W 891 nt3.58□□□□□ -1.84
NMD2P38798 YPR050CYPR050C 414 nt3.58□□□□□ -1.84
NMD2P38798 tC(GCA)BtC(GCA)B 72 nt3.57□□□□□ -1.84
NMD2P38798 tC(GCA)GtC(GCA)G 72 nt3.57□□□□□ -1.84
NMD2P38798 tC(GCA)P1tC(GCA)P1 72 nt3.57□□□□□ -1.84
NMD2P38798 tC(GCA)P2tC(GCA)P2 72 nt3.57□□□□□ -1.84
NMD2P38798 BNA7YDR428C 786 nt3.57□□□□□ -1.84
NMD2P38798 TSA2YDR453C 591 nt3.57□□□□□ -1.84
NMD2P38798 AST2YER101C 1293 nt3.57□□□□□ -1.84
NMD2P38798 ROG1YGL144C 2058 nt3.57□□□□□ -1.84
NMD2P38798 FLO1YAR050W 4614 nt3.57□□□□□ -1.84
NMD2P38798 GCD6YDR211W 2139 nt3.56□□□□□ -1.84
NMD2P38798 SLH1YGR271W 5904 nt3.56□□□□□ -1.84
NMD2P38798 YLR001CYLR001C 2589 nt3.56□□□□□ -1.84
NMD2P38798 GPI19YDR437W 423 nt3.56□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 49.1 ms