Protein–RNA interactions for Protein: P11940

PABPC1, Polyadenylate-binding protein 1, humanhuman

Known RBP Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11940 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PABPC1P11940 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.16■□□□□ 0.98
PABPC1P11940 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PABPC1P11940 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.16■□□□□ 0.98
PABPC1P11940 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.16■□□□□ 0.98
PABPC1P11940 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.16■□□□□ 0.98
PABPC1P11940 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.16■□□□□ 0.98
PABPC1P11940 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
PABPC1P11940 EP400NL-214ENST00000641289 2402 ntBASIC21.16■□□□□ 0.98
PABPC1P11940 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PABPC1P11940 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PABPC1P11940 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PABPC1P11940 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PABPC1P11940 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
PABPC1P11940 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PABPC1P11940 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PABPC1P11940 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.15■□□□□ 0.98
PABPC1P11940 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PABPC1P11940 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PABPC1P11940 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.15■□□□□ 0.98
PABPC1P11940 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.15■□□□□ 0.98
PABPC1P11940 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PABPC1P11940 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PABPC1P11940 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PABPC1P11940 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.15■□□□□ 0.98
PABPC1P11940 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PABPC1P11940 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PABPC1P11940 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
PABPC1P11940 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
PABPC1P11940 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
PABPC1P11940 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.14■□□□□ 0.98
PABPC1P11940 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
PABPC1P11940 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PABPC1P11940 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
PABPC1P11940 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PABPC1P11940 ABHD17AP1-201ENST00000358206 933 ntBASIC21.14■□□□□ 0.97
PABPC1P11940 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PABPC1P11940 AL355472.2-201ENST00000422958 438 ntBASIC21.14■□□□□ 0.97
PABPC1P11940 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
PABPC1P11940 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.14■□□□□ 0.97
PABPC1P11940 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.14■□□□□ 0.97
PABPC1P11940 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.14■□□□□ 0.97
PABPC1P11940 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.14■□□□□ 0.97
PABPC1P11940 CYP2T3P-201ENST00000601990 817 ntBASIC21.14■□□□□ 0.97
PABPC1P11940 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
PABPC1P11940 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PABPC1P11940 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
PABPC1P11940 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
PABPC1P11940 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PABPC1P11940 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
PABPC1P11940 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PABPC1P11940 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PABPC1P11940 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
PABPC1P11940 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PABPC1P11940 AC244015.2-201ENST00000616358 1861 ntBASIC21.13■□□□□ 0.97
PABPC1P11940 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PABPC1P11940 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PABPC1P11940 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PABPC1P11940 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PABPC1P11940 LSM12P1-201ENST00000411836 588 ntBASIC21.13■□□□□ 0.97
PABPC1P11940 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.13■□□□□ 0.97
PABPC1P11940 AC091874.3-201ENST00000512672 1195 ntBASIC21.13■□□□□ 0.97
PABPC1P11940 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
PABPC1P11940 MYC-209ENST00000641252 345 ntBASIC21.13■□□□□ 0.97
PABPC1P11940 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PABPC1P11940 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PABPC1P11940 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.13■□□□□ 0.97
PABPC1P11940 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.13■□□□□ 0.97
PABPC1P11940 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PABPC1P11940 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PABPC1P11940 AC116050.2-201ENST00000612102 1779 ntBASIC21.13■□□□□ 0.97
PABPC1P11940 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PABPC1P11940 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PABPC1P11940 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PABPC1P11940 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
PABPC1P11940 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PABPC1P11940 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.12■□□□□ 0.97
PABPC1P11940 MCRIP2P1-201ENST00000394346 511 ntBASIC21.12■□□□□ 0.97
PABPC1P11940 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PABPC1P11940 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.12■□□□□ 0.97
PABPC1P11940 DUSP5P2-201ENST00000426873 1033 ntBASIC21.12■□□□□ 0.97
PABPC1P11940 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PABPC1P11940 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.12■□□□□ 0.97
PABPC1P11940 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.12■□□□□ 0.97
PABPC1P11940 AC097658.1-201ENST00000475555 843 ntBASIC21.12■□□□□ 0.97
PABPC1P11940 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.12■□□□□ 0.97
PABPC1P11940 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.12■□□□□ 0.97
PABPC1P11940 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.12■□□□□ 0.97
PABPC1P11940 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.12■□□□□ 0.97
PABPC1P11940 AC083880.1-201ENST00000608266 535 ntBASIC21.12■□□□□ 0.97
PABPC1P11940 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.12■□□□□ 0.97
PABPC1P11940 SLC25A24-204ENST00000569674 2357 ntBASIC21.12■□□□□ 0.97
PABPC1P11940 KRT17P1-201ENST00000399211 1546 ntBASIC21.12■□□□□ 0.97
PABPC1P11940 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PABPC1P11940 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.12■□□□□ 0.97
PABPC1P11940 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.12■□□□□ 0.97
PABPC1P11940 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.12■□□□□ 0.97
PABPC1P11940 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
PABPC1P11940 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PABPC1P11940 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms