Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 RPL1BYGL135W 654 nt1.62□□□□□ -2.15
TY1B-JR1P47098 RLP24YLR009W 600 nt1.62□□□□□ -2.15
TY1B-JR1P47098 RPL1AYPL220W 654 nt1.62□□□□□ -2.15
TY1B-JR1P47098 TAZ1YPR140W 1146 nt1.62□□□□□ -2.15
TY1B-JR1P47098 BIR1YJR089W 2865 nt1.61□□□□□ -2.15
TY1B-JR1P47098 BUR2YLR226W 1188 nt1.61□□□□□ -2.15
TY1B-JR1P47098 YMR175W-AYMR175W-A 195 nt1.61□□□□□ -2.15
TY1B-JR1P47098 YHR182C-AYHR182C-A 474 nt1.6□□□□□ -2.15
TY1B-JR1P47098 YJL119CYJL119C 324 nt1.6□□□□□ -2.15
TY1B-JR1P47098 PKH2YOL100W 3246 nt1.6□□□□□ -2.15
TY1B-JR1P47098 NEM1YHR004C 1341 nt1.6□□□□□ -2.15
TY1B-JR1P47098 SCC2YDR180W 4482 nt1.6□□□□□ -2.15
TY1B-JR1P47098 GPI17YDR434W 1605 nt1.59□□□□□ -2.15
TY1B-JR1P47098 YLR366WYLR366W 306 nt1.59□□□□□ -2.15
TY1B-JR1P47098 YMR321CYMR321C 318 nt1.59□□□□□ -2.15
TY1B-JR1P47098 YOR072W-AYOR072W-A 249 nt1.59□□□□□ -2.15
TY1B-JR1P47098 ATX2YOR079C 942 nt1.59□□□□□ -2.15
TY1B-JR1P47098 BDP1YNL039W 1785 nt1.59□□□□□ -2.15
TY1B-JR1P47098 YAL042C-AYAL042C-A 378 nt1.59□□□□□ -2.16
TY1B-JR1P47098 PTC5YOR090C 1719 nt1.59□□□□□ -2.16
TY1B-JR1P47098 PRP3YDR473C 1410 nt1.58□□□□□ -2.16
TY1B-JR1P47098 SPT7YBR081C 3999 nt1.58□□□□□ -2.16
TY1B-JR1P47098 ATG9YDL149W 2994 nt1.58□□□□□ -2.16
TY1B-JR1P47098 RLP7YNL002C 969 nt1.57□□□□□ -2.16
TY1B-JR1P47098 IRC6YFR043C 714 nt1.57□□□□□ -2.16
TY1B-JR1P47098 YPS5YGL259W 498 nt1.57□□□□□ -2.16
TY1B-JR1P47098 YET1YKL065C 621 nt1.57□□□□□ -2.16
TY1B-JR1P47098 YOL134CYOL134C 390 nt1.57□□□□□ -2.16
TY1B-JR1P47098 HHF1YBR009C 312 nt1.57□□□□□ -2.16
TY1B-JR1P47098 RGL1YPL066W 1440 nt1.56□□□□□ -2.16
TY1B-JR1P47098 HMLALPHA1YCL066W 528 nt1.56□□□□□ -2.16
TY1B-JR1P47098 MATALPHA1YCR040W 528 nt1.56□□□□□ -2.16
TY1B-JR1P47098 IMG2YCR071C 441 nt1.56□□□□□ -2.16
TY1B-JR1P47098 YCR081C-AYCR081C-A 237 nt1.56□□□□□ -2.16
TY1B-JR1P47098 PMI40YER003C 1290 nt1.56□□□□□ -2.16
TY1B-JR1P47098 YBR174CYBR174C 315 nt1.56□□□□□ -2.16
TY1B-JR1P47098 ALG8YOR067C 1734 nt1.56□□□□□ -2.16
TY1B-JR1P47098 SWI4YER111C 3282 nt1.55□□□□□ -2.16
TY1B-JR1P47098 SPT14YPL175W 1359 nt1.55□□□□□ -2.16
TY1B-JR1P47098 PCL5YHR071W 690 nt1.55□□□□□ -2.16
TY1B-JR1P47098 YDR336WYDR336W 945 nt1.54□□□□□ -2.16
TY1B-JR1P47098 CDA2YLR308W 939 nt1.54□□□□□ -2.16
TY1B-JR1P47098 YBR255C-AYBR255C-A 363 nt1.54□□□□□ -2.16
TY1B-JR1P47098 CTR86YCR054C 1692 nt1.54□□□□□ -2.16
TY1B-JR1P47098 YNL011CYNL011C 1335 nt1.54□□□□□ -2.16
TY1B-JR1P47098 YPT52YKR014C 705 nt1.54□□□□□ -2.16
TY1B-JR1P47098 CDC39YCR093W 6327 nt1.53□□□□□ -2.16
TY1B-JR1P47098 MTL1YGR023W 1656 nt1.53□□□□□ -2.16
TY1B-JR1P47098 RPA34YJL148W 702 nt1.53□□□□□ -2.16
TY1B-JR1P47098 GRE2YOL151W 1029 nt1.53□□□□□ -2.16
TY1B-JR1P47098 YMR160WYMR160W 2451 nt1.53□□□□□ -2.16
TY1B-JR1P47098 RAD18YCR066W 1464 nt1.53□□□□□ -2.16
TY1B-JR1P47098 PGD1YGL025C 1194 nt1.52□□□□□ -2.17
TY1B-JR1P47098 SKI8YGL213C 1194 nt1.52□□□□□ -2.17
TY1B-JR1P47098 GCN2YDR283C 4980 nt1.52□□□□□ -2.17
TY1B-JR1P47098 IQG1YPL242C 4488 nt1.52□□□□□ -2.17
TY1B-JR1P47098 MRPL44YMR225C 297 nt1.52□□□□□ -2.17
TY1B-JR1P47098 YMR242W-AYMR242W-A 90 nt1.52□□□□□ -2.17
TY1B-JR1P47098 NDJ1YOL104C 1059 nt1.52□□□□□ -2.17
TY1B-JR1P47098 OTU2YHL013C 924 nt1.51□□□□□ -2.17
TY1B-JR1P47098 ARG3YJL088W 1017 nt1.51□□□□□ -2.17
TY1B-JR1P47098 YBL005W-BYBL005W-B 5268 nt1.51□□□□□ -2.17
TY1B-JR1P47098 PET127YOR017W 2403 nt1.51□□□□□ -2.17
TY1B-JR1P47098 MNT3YIL014W 1893 nt1.5□□□□□ -2.17
TY1B-JR1P47098 WBP1YEL002C 1293 nt1.5□□□□□ -2.17
TY1B-JR1P47098 APA1YCL050C 966 nt1.5□□□□□ -2.17
TY1B-JR1P47098 URC2YDR520C 2319 nt1.5□□□□□ -2.17
TY1B-JR1P47098 PSP1YDR505C 2526 nt1.49□□□□□ -2.17
TY1B-JR1P47098 NAM7YMR080C 2916 nt1.49□□□□□ -2.17
TY1B-JR1P47098 TMA7YLR262C-A 195 nt1.49□□□□□ -2.17
TY1B-JR1P47098 HSP10YOR020C 321 nt1.48□□□□□ -2.17
TY1B-JR1P47098 EGD1YPL037C 474 nt1.48□□□□□ -2.17
TY1B-JR1P47098 PBY1YBR094W 2262 nt1.48□□□□□ -2.17
TY1B-JR1P47098 YIL080WYIL080W 4722 nt1.47□□□□□ -2.17
TY1B-JR1P47098 RPH1YER169W 2391 nt1.47□□□□□ -2.17
TY1B-JR1P47098 YGL193CYGL193C 312 nt1.47□□□□□ -2.17
TY1B-JR1P47098 MRPL6YHR147C 645 nt1.47□□□□□ -2.17
TY1B-JR1P47098 YMR086C-AYMR086C-A 339 nt1.47□□□□□ -2.17
TY1B-JR1P47098 AVT2YEL064C 1443 nt1.46□□□□□ -2.18
TY1B-JR1P47098 GPM2YDL021W 936 nt1.46□□□□□ -2.18
TY1B-JR1P47098 COQ10YOL008W 624 nt1.46□□□□□ -2.18
TY1B-JR1P47098 AHC1YOR023C 1701 nt1.45□□□□□ -2.18
TY1B-JR1P47098 YCT1YLL055W 1596 nt1.45□□□□□ -2.18
TY1B-JR1P47098 FMP27YLR454W 7887 nt1.45□□□□□ -2.18
TY1B-JR1P47098 FRK1YPL141C 2598 nt1.45□□□□□ -2.18
TY1B-JR1P47098 YDL211CYDL211C 1119 nt1.45□□□□□ -2.18
TY1B-JR1P47098 YIL086CYIL086C 309 nt1.45□□□□□ -2.18
TY1B-JR1P47098 YNL018CYNL018C 1839 nt1.45□□□□□ -2.18
TY1B-JR1P47098 YKL100CYKL100C 1764 nt1.45□□□□□ -2.18
TY1B-JR1P47098 YFH7YFR007W 1062 nt1.44□□□□□ -2.18
TY1B-JR1P47098 COX13YGL191W 390 nt1.44□□□□□ -2.18
TY1B-JR1P47098 TDA10YGR205W 873 nt1.44□□□□□ -2.18
TY1B-JR1P47098 REV7YIL139C 738 nt1.44□□□□□ -2.18
TY1B-JR1P47098 YKL070WYKL070W 510 nt1.44□□□□□ -2.18
TY1B-JR1P47098 PEX12YMR026C 1200 nt1.44□□□□□ -2.18
TY1B-JR1P47098 RPN8YOR261C 1017 nt1.44□□□□□ -2.18
TY1B-JR1P47098 SPC110YDR356W 2835 nt1.44□□□□□ -2.18
TY1B-JR1P47098 SET4YJL105W 1683 nt1.44□□□□□ -2.18
TY1B-JR1P47098 COS5YJR161C 1152 nt1.44□□□□□ -2.18
TY1B-JR1P47098 IGO1YNL157W 507 nt1.44□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 48.7 ms