Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LDB2O43679 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
LDB2O43679 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LDB2O43679 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
LDB2O43679 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LDB2O43679 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
LDB2O43679 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.75■□□□□ 0.91
LDB2O43679 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.75■□□□□ 0.91
LDB2O43679 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
LDB2O43679 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.75■□□□□ 0.91
LDB2O43679 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LDB2O43679 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.75■□□□□ 0.91
LDB2O43679 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.75■□□□□ 0.91
LDB2O43679 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LDB2O43679 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
LDB2O43679 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LDB2O43679 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LDB2O43679 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LDB2O43679 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LDB2O43679 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LDB2O43679 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
LDB2O43679 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
LDB2O43679 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LDB2O43679 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LDB2O43679 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.74■□□□□ 0.91
LDB2O43679 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.74■□□□□ 0.91
LDB2O43679 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LDB2O43679 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.74■□□□□ 0.91
LDB2O43679 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.74■□□□□ 0.91
LDB2O43679 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.74■□□□□ 0.91
LDB2O43679 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
LDB2O43679 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LDB2O43679 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LDB2O43679 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
LDB2O43679 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
LDB2O43679 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
LDB2O43679 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LDB2O43679 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
LDB2O43679 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.73■□□□□ 0.91
LDB2O43679 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.73■□□□□ 0.91
LDB2O43679 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LDB2O43679 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.73■□□□□ 0.91
LDB2O43679 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.73■□□□□ 0.91
LDB2O43679 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.73■□□□□ 0.91
LDB2O43679 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
LDB2O43679 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.73■□□□□ 0.91
LDB2O43679 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.73■□□□□ 0.91
LDB2O43679 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.73■□□□□ 0.91
LDB2O43679 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LDB2O43679 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LDB2O43679 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LDB2O43679 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LDB2O43679 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LDB2O43679 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
LDB2O43679 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LDB2O43679 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LDB2O43679 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
LDB2O43679 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.72■□□□□ 0.91
LDB2O43679 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LDB2O43679 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LDB2O43679 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LDB2O43679 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LDB2O43679 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LDB2O43679 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LDB2O43679 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.72■□□□□ 0.91
LDB2O43679 AC091799.1-201ENST00000422823 811 ntBASIC20.72■□□□□ 0.91
LDB2O43679 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
LDB2O43679 AC137761.2-201ENST00000561729 223 ntBASIC20.72■□□□□ 0.91
LDB2O43679 AC145350.3-201ENST00000569033 163 ntBASIC20.72■□□□□ 0.91
LDB2O43679 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
LDB2O43679 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LDB2O43679 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LDB2O43679 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.72■□□□□ 0.91
LDB2O43679 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
LDB2O43679 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.72■□□□□ 0.91
LDB2O43679 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LDB2O43679 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
LDB2O43679 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LDB2O43679 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
LDB2O43679 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LDB2O43679 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.71■□□□□ 0.91
LDB2O43679 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.71■□□□□ 0.91
LDB2O43679 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LDB2O43679 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LDB2O43679 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LDB2O43679 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LDB2O43679 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LDB2O43679 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
LDB2O43679 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.91
LDB2O43679 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LDB2O43679 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LDB2O43679 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.7■□□□□ 0.9
LDB2O43679 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
LDB2O43679 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.7■□□□□ 0.9
LDB2O43679 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.7■□□□□ 0.9
LDB2O43679 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.7■□□□□ 0.9
LDB2O43679 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.7■□□□□ 0.9
LDB2O43679 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.7■□□□□ 0.9
LDB2O43679 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.7■□□□□ 0.9
LDB2O43679 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms