Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC24.9■■□□□ 1.58
PCDHAC2Q9Y5I4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHAC2Q9Y5I4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC24.9■■□□□ 1.58
PCDHAC2Q9Y5I4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC24.9■■□□□ 1.58
PCDHAC2Q9Y5I4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC24.9■■□□□ 1.58
PCDHAC2Q9Y5I4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC24.9■■□□□ 1.58
PCDHAC2Q9Y5I4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHAC2Q9Y5I4 AL589743.5-201ENST00000616611 1050 ntBASIC24.9■■□□□ 1.58
PCDHAC2Q9Y5I4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
PCDHAC2Q9Y5I4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
PCDHAC2Q9Y5I4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHAC2Q9Y5I4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
PCDHAC2Q9Y5I4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC24.89■■□□□ 1.58
PCDHAC2Q9Y5I4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC24.89■■□□□ 1.58
PCDHAC2Q9Y5I4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC24.89■■□□□ 1.58
PCDHAC2Q9Y5I4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHAC2Q9Y5I4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHAC2Q9Y5I4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC24.89■■□□□ 1.58
PCDHAC2Q9Y5I4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC24.89■■□□□ 1.58
PCDHAC2Q9Y5I4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHAC2Q9Y5I4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHAC2Q9Y5I4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHAC2Q9Y5I4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC24.89■■□□□ 1.58
PCDHAC2Q9Y5I4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC24.89■■□□□ 1.58
PCDHAC2Q9Y5I4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHAC2Q9Y5I4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC24.89■■□□□ 1.58
PCDHAC2Q9Y5I4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC24.89■■□□□ 1.58
PCDHAC2Q9Y5I4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC24.89■■□□□ 1.58
PCDHAC2Q9Y5I4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC24.89■■□□□ 1.58
PCDHAC2Q9Y5I4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
PCDHAC2Q9Y5I4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC24.89■■□□□ 1.57
PCDHAC2Q9Y5I4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC24.89■■□□□ 1.57
PCDHAC2Q9Y5I4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHAC2Q9Y5I4 AC092368.3-202ENST00000574180 1591 ntBASIC24.88■■□□□ 1.57
PCDHAC2Q9Y5I4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC24.88■■□□□ 1.57
PCDHAC2Q9Y5I4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC24.88■■□□□ 1.57
PCDHAC2Q9Y5I4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC24.88■■□□□ 1.57
PCDHAC2Q9Y5I4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC24.88■■□□□ 1.57
PCDHAC2Q9Y5I4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHAC2Q9Y5I4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHAC2Q9Y5I4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHAC2Q9Y5I4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHAC2Q9Y5I4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC24.88■■□□□ 1.57
PCDHAC2Q9Y5I4 RPPH1-201ENST00000516869 333 ntBASIC24.88■■□□□ 1.57
PCDHAC2Q9Y5I4 C1QBPP2-201ENST00000528754 825 ntBASIC24.88■■□□□ 1.57
PCDHAC2Q9Y5I4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHAC2Q9Y5I4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHAC2Q9Y5I4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHAC2Q9Y5I4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC24.88■■□□□ 1.57
PCDHAC2Q9Y5I4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC24.88■■□□□ 1.57
PCDHAC2Q9Y5I4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHAC2Q9Y5I4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC24.87■■□□□ 1.57
PCDHAC2Q9Y5I4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHAC2Q9Y5I4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHAC2Q9Y5I4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHAC2Q9Y5I4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHAC2Q9Y5I4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHAC2Q9Y5I4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHAC2Q9Y5I4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC24.87■■□□□ 1.57
PCDHAC2Q9Y5I4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC24.87■■□□□ 1.57
PCDHAC2Q9Y5I4 AC007322.3-201ENST00000426526 701 ntBASIC24.87■■□□□ 1.57
PCDHAC2Q9Y5I4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC24.87■■□□□ 1.57
PCDHAC2Q9Y5I4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC24.87■■□□□ 1.57
PCDHAC2Q9Y5I4 CYP21A1P-202ENST00000354927 1481 ntBASIC24.87■■□□□ 1.57
PCDHAC2Q9Y5I4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHAC2Q9Y5I4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHAC2Q9Y5I4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHAC2Q9Y5I4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC24.86■■□□□ 1.57
PCDHAC2Q9Y5I4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHAC2Q9Y5I4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHAC2Q9Y5I4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC24.86■■□□□ 1.57
PCDHAC2Q9Y5I4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC24.86■■□□□ 1.57
PCDHAC2Q9Y5I4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC24.86■■□□□ 1.57
PCDHAC2Q9Y5I4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHAC2Q9Y5I4 SOX15-203ENST00000570788 1093 ntBASIC24.86■■□□□ 1.57
PCDHAC2Q9Y5I4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC24.86■■□□□ 1.57
PCDHAC2Q9Y5I4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC24.86■■□□□ 1.57
PCDHAC2Q9Y5I4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHAC2Q9Y5I4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHAC2Q9Y5I4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHAC2Q9Y5I4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
PCDHAC2Q9Y5I4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.86■■□□□ 1.57
PCDHAC2Q9Y5I4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC24.86■■□□□ 1.57
PCDHAC2Q9Y5I4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
PCDHAC2Q9Y5I4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHAC2Q9Y5I4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC24.85■■□□□ 1.57
PCDHAC2Q9Y5I4 SAPCD2P1-201ENST00000395413 1184 ntBASIC24.85■■□□□ 1.57
PCDHAC2Q9Y5I4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC24.85■■□□□ 1.57
PCDHAC2Q9Y5I4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHAC2Q9Y5I4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHAC2Q9Y5I4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC24.85■■□□□ 1.57
PCDHAC2Q9Y5I4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHAC2Q9Y5I4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC24.85■■□□□ 1.57
PCDHAC2Q9Y5I4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHAC2Q9Y5I4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC24.85■■□□□ 1.57
PCDHAC2Q9Y5I4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHAC2Q9Y5I4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHAC2Q9Y5I4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHAC2Q9Y5I4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
PCDHAC2Q9Y5I4 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 147.3 ms