Protein–RNA interactions for Protein: P11586

MTHFD1, C-1-tetrahydrofolate synthase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1P11586 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MTHFD1P11586 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MTHFD1P11586 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MTHFD1P11586 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
MTHFD1P11586 SLC7A5P2-201ENST00000553010 536 ntBASIC20.53■□□□□ 0.88
MTHFD1P11586 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.53■□□□□ 0.88
MTHFD1P11586 AC120498.10-201ENST00000621827 505 ntBASIC20.53■□□□□ 0.88
MTHFD1P11586 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.53■□□□□ 0.88
MTHFD1P11586 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
MTHFD1P11586 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MTHFD1P11586 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MTHFD1P11586 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.53■□□□□ 0.88
MTHFD1P11586 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
MTHFD1P11586 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MTHFD1P11586 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.52■□□□□ 0.88
MTHFD1P11586 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MTHFD1P11586 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.52■□□□□ 0.88
MTHFD1P11586 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MTHFD1P11586 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MTHFD1P11586 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.52■□□□□ 0.88
MTHFD1P11586 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.52■□□□□ 0.88
MTHFD1P11586 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.52■□□□□ 0.88
MTHFD1P11586 AC090192.1-201ENST00000517740 490 ntBASIC20.52■□□□□ 0.88
MTHFD1P11586 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.52■□□□□ 0.88
MTHFD1P11586 AC073111.5-205ENST00000641717 521 ntBASIC20.52■□□□□ 0.88
MTHFD1P11586 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
MTHFD1P11586 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MTHFD1P11586 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
MTHFD1P11586 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
MTHFD1P11586 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.51■□□□□ 0.87
MTHFD1P11586 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
MTHFD1P11586 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.51■□□□□ 0.87
MTHFD1P11586 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
MTHFD1P11586 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MTHFD1P11586 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MTHFD1P11586 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MTHFD1P11586 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
MTHFD1P11586 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
MTHFD1P11586 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
MTHFD1P11586 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
MTHFD1P11586 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MTHFD1P11586 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
MTHFD1P11586 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.51■□□□□ 0.87
MTHFD1P11586 SLC7A5P1-201ENST00000568957 537 ntBASIC20.51■□□□□ 0.87
MTHFD1P11586 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.51■□□□□ 0.87
MTHFD1P11586 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.51■□□□□ 0.87
MTHFD1P11586 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
MTHFD1P11586 AF106564.1-201ENST00000607058 2553 ntBASIC20.51■□□□□ 0.87
MTHFD1P11586 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MTHFD1P11586 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MTHFD1P11586 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
MTHFD1P11586 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MTHFD1P11586 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
MTHFD1P11586 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
MTHFD1P11586 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.5■□□□□ 0.87
MTHFD1P11586 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
MTHFD1P11586 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MTHFD1P11586 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MTHFD1P11586 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MTHFD1P11586 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MTHFD1P11586 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
MTHFD1P11586 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.5■□□□□ 0.87
MTHFD1P11586 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MTHFD1P11586 AC061975.6-201ENST00000579045 1553 ntBASIC20.5■□□□□ 0.87
MTHFD1P11586 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MTHFD1P11586 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.5■□□□□ 0.87
MTHFD1P11586 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.5■□□□□ 0.87
MTHFD1P11586 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MTHFD1P11586 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MTHFD1P11586 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MTHFD1P11586 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MTHFD1P11586 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
MTHFD1P11586 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
MTHFD1P11586 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MTHFD1P11586 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MTHFD1P11586 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MTHFD1P11586 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MTHFD1P11586 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MTHFD1P11586 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
MTHFD1P11586 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MTHFD1P11586 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MTHFD1P11586 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
MTHFD1P11586 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.49■□□□□ 0.87
MTHFD1P11586 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.49■□□□□ 0.87
MTHFD1P11586 CDCA4P2-201ENST00000441182 718 ntBASIC20.49■□□□□ 0.87
MTHFD1P11586 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.49■□□□□ 0.87
MTHFD1P11586 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.49■□□□□ 0.87
MTHFD1P11586 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MTHFD1P11586 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MTHFD1P11586 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.49■□□□□ 0.87
MTHFD1P11586 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.49■□□□□ 0.87
MTHFD1P11586 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.49■□□□□ 0.87
MTHFD1P11586 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
MTHFD1P11586 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MTHFD1P11586 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.48■□□□□ 0.87
MTHFD1P11586 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
MTHFD1P11586 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
MTHFD1P11586 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.48■□□□□ 0.87
MTHFD1P11586 KRT16P2-201ENST00000414673 1423 ntBASIC20.48■□□□□ 0.87
MTHFD1P11586 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms