Protein–RNA interactions for Protein: Q99337

TY1B-NL2, Transposon Ty1-NL2 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-NL2Q99337 YOR029WYOR029W 336 nt1.91□□□□□ -2.1
TY1B-NL2Q99337 YLR035C-AYLR035C-A 3468 nt1.9□□□□□ -2.1
TY1B-NL2Q99337 SPC98YNL126W 2541 nt1.9□□□□□ -2.1
TY1B-NL2Q99337 RPS25AYGR027C 327 nt1.9□□□□□ -2.11
TY1B-NL2Q99337 YBP1YBR216C 2025 nt1.9□□□□□ -2.11
TY1B-NL2Q99337 MET18YIL128W 3099 nt1.9□□□□□ -2.11
TY1B-NL2Q99337 GEA2YEL022W 4380 nt1.9□□□□□ -2.11
TY1B-NL2Q99337 USO1YDL058W 5373 nt1.89□□□□□ -2.11
TY1B-NL2Q99337 DIA2YOR080W 2199 nt1.89□□□□□ -2.11
TY1B-NL2Q99337 RIX1YHR197W 2292 nt1.89□□□□□ -2.11
TY1B-NL2Q99337 DOP1YDR141C 5097 nt1.89□□□□□ -2.11
TY1B-NL2Q99337 VHR1YIL056W 1923 nt1.89□□□□□ -2.11
TY1B-NL2Q99337 TAM41YGR046W 1158 nt1.88□□□□□ -2.11
TY1B-NL2Q99337 EAF7YNL136W 1278 nt1.88□□□□□ -2.11
TY1B-NL2Q99337 YGR160WYGR160W 612 nt1.88□□□□□ -2.11
TY1B-NL2Q99337 YHR180W-AYHR180W-A 183 nt1.88□□□□□ -2.11
TY1B-NL2Q99337 TPM2YIL138C 486 nt1.88□□□□□ -2.11
TY1B-NL2Q99337 YJR061WYJR061W 2808 nt1.87□□□□□ -2.11
TY1B-NL2Q99337 HRI1YLR301W 735 nt1.87□□□□□ -2.11
TY1B-NL2Q99337 YLR416CYLR416C 399 nt1.87□□□□□ -2.11
TY1B-NL2Q99337 TSR4YOL022C 1227 nt1.87□□□□□ -2.11
TY1B-NL2Q99337 OST1YJL002C 1431 nt1.86□□□□□ -2.11
TY1B-NL2Q99337 ELG1YOR144C 2376 nt1.86□□□□□ -2.11
TY1B-NL2Q99337 SOK1YDR006C 2706 nt1.86□□□□□ -2.11
TY1B-NL2Q99337 NEM1YHR004C 1341 nt1.86□□□□□ -2.11
TY1B-NL2Q99337 RRP14YKL082C 1305 nt1.86□□□□□ -2.11
TY1B-NL2Q99337 UTP25YIL091C 2166 nt1.86□□□□□ -2.11
TY1B-NL2Q99337 YCR099CYCR099C 468 nt1.86□□□□□ -2.11
TY1B-NL2Q99337 tF(GAA)BtF(GAA)B 73 nt1.86□□□□□ -2.11
TY1B-NL2Q99337 tF(GAA)FtF(GAA)F 73 nt1.86□□□□□ -2.11
TY1B-NL2Q99337 tF(GAA)GtF(GAA)G 73 nt1.86□□□□□ -2.11
TY1B-NL2Q99337 tF(GAA)H1tF(GAA)H1 73 nt1.86□□□□□ -2.11
TY1B-NL2Q99337 tF(GAA)H2tF(GAA)H2 73 nt1.86□□□□□ -2.11
TY1B-NL2Q99337 tF(GAA)MtF(GAA)M 73 nt1.86□□□□□ -2.11
TY1B-NL2Q99337 tF(GAA)P1tF(GAA)P1 73 nt1.86□□□□□ -2.11
TY1B-NL2Q99337 tF(GAA)P2tF(GAA)P2 73 nt1.86□□□□□ -2.11
TY1B-NL2Q99337 RPL1BYGL135W 654 nt1.86□□□□□ -2.11
TY1B-NL2Q99337 YIR014WYIR014W 729 nt1.86□□□□□ -2.11
TY1B-NL2Q99337 INA22YIR024C 651 nt1.86□□□□□ -2.11
TY1B-NL2Q99337 RPL1AYPL220W 654 nt1.86□□□□□ -2.11
TY1B-NL2Q99337 NRG2YBR066C 663 nt1.86□□□□□ -2.11
TY1B-NL2Q99337 YDL199CYDL199C 2064 nt1.86□□□□□ -2.11
TY1B-NL2Q99337 MED1YPR070W 1701 nt1.86□□□□□ -2.11
TY1B-NL2Q99337 CTR86YCR054C 1692 nt1.86□□□□□ -2.11
TY1B-NL2Q99337 YER085CYER085C 522 nt1.86□□□□□ -2.11
TY1B-NL2Q99337 MBA1YBR185C 837 nt1.86□□□□□ -2.11
TY1B-NL2Q99337 LHS1YKL073W 2646 nt1.85□□□□□ -2.11
TY1B-NL2Q99337 ALG11YNL048W 1647 nt1.85□□□□□ -2.11
TY1B-NL2Q99337 MDM32YOR147W 1869 nt1.85□□□□□ -2.11
TY1B-NL2Q99337 CTH1YDR151C 978 nt1.85□□□□□ -2.11
TY1B-NL2Q99337 INP1YMR204C 1263 nt1.85□□□□□ -2.11
TY1B-NL2Q99337 YOL166CYOL166C 339 nt1.85□□□□□ -2.11
TY1B-NL2Q99337 YDR210W-BYDR210W-B 5313 nt1.85□□□□□ -2.11
TY1B-NL2Q99337 PLC1YPL268W 2610 nt1.85□□□□□ -2.11
TY1B-NL2Q99337 YDR179W-AYDR179W-A 1392 nt1.84□□□□□ -2.11
TY1B-NL2Q99337 AEP2YMR282C 1743 nt1.84□□□□□ -2.11
TY1B-NL2Q99337 GRX3YDR098C 858 nt1.84□□□□□ -2.11
TY1B-NL2Q99337 YDR169C-AYDR169C-A 150 nt1.84□□□□□ -2.11
TY1B-NL2Q99337 SNO3YFL060C 669 nt1.84□□□□□ -2.11
TY1B-NL2Q99337 CSE4YKL049C 690 nt1.84□□□□□ -2.11
TY1B-NL2Q99337 SNO2YNL334C 669 nt1.84□□□□□ -2.11
TY1B-NL2Q99337 AFI1YOR129C 2682 nt1.84□□□□□ -2.12
TY1B-NL2Q99337 YFL002W-AYFL002W-A 5313 nt1.84□□□□□ -2.12
TY1B-NL2Q99337 YGR161W-BYGR161W-B 5313 nt1.84□□□□□ -2.12
TY1B-NL2Q99337 YLR410W-BYLR410W-B 5313 nt1.84□□□□□ -2.12
TY1B-NL2Q99337 YCL019WYCL019W 5313 nt1.84□□□□□ -2.12
TY1B-NL2Q99337 PUF2YPR042C 3228 nt1.84□□□□□ -2.12
TY1B-NL2Q99337 WBP1YEL002C 1293 nt1.83□□□□□ -2.12
TY1B-NL2Q99337 TRM112YNR046W 408 nt1.83□□□□□ -2.12
TY1B-NL2Q99337 HHF1YBR009C 312 nt1.83□□□□□ -2.12
TY1B-NL2Q99337 MSL1YIR009W 336 nt1.83□□□□□ -2.12
TY1B-NL2Q99337 YKL071WYKL071W 771 nt1.83□□□□□ -2.12
TY1B-NL2Q99337 YKR011CYKR011C 1062 nt1.83□□□□□ -2.12
TY1B-NL2Q99337 YLR154W-AYLR154W-A 186 nt1.83□□□□□ -2.12
TY1B-NL2Q99337 YBL073WYBL073W 312 nt1.83□□□□□ -2.12
TY1B-NL2Q99337 NPL4YBR170C 1743 nt1.82□□□□□ -2.12
TY1B-NL2Q99337 URC2YDR520C 2319 nt1.82□□□□□ -2.12
TY1B-NL2Q99337 ALG8YOR067C 1734 nt1.82□□□□□ -2.12
TY1B-NL2Q99337 MON2YNL297C 4911 nt1.82□□□□□ -2.12
TY1B-NL2Q99337 PMD1YER132C 5262 nt1.82□□□□□ -2.12
TY1B-NL2Q99337 YOR192C-BYOR192C-B 5313 nt1.81□□□□□ -2.12
TY1B-NL2Q99337 RRF1YHR038W 693 nt1.81□□□□□ -2.12
TY1B-NL2Q99337 YMR247W-AYMR247W-A 144 nt1.81□□□□□ -2.12
TY1B-NL2Q99337 YDR034C-DYDR034C-D 5313 nt1.81□□□□□ -2.12
TY1B-NL2Q99337 UTP5YDR398W 1932 nt1.8□□□□□ -2.12
TY1B-NL2Q99337 SPO22YIL073C 2928 nt1.8□□□□□ -2.12
TY1B-NL2Q99337 SUB1YMR039C 879 nt1.8□□□□□ -2.12
TY1B-NL2Q99337 RGP1YDR137W 1992 nt1.79□□□□□ -2.12
TY1B-NL2Q99337 HFM1YGL251C 3564 nt1.79□□□□□ -2.12
TY1B-NL2Q99337 SHE9YDR393W 1371 nt1.79□□□□□ -2.12
TY1B-NL2Q99337 SHE2YKL130C 741 nt1.79□□□□□ -2.12
TY1B-NL2Q99337 RPB11YOL005C 363 nt1.79□□□□□ -2.12
TY1B-NL2Q99337 NDJ1YOL104C 1059 nt1.79□□□□□ -2.12
TY1B-NL2Q99337 CRS5YOR031W 210 nt1.79□□□□□ -2.12
TY1B-NL2Q99337 CYC2YOR037W 1101 nt1.79□□□□□ -2.12
TY1B-NL2Q99337 YBR134WYBR134W 402 nt1.79□□□□□ -2.12
TY1B-NL2Q99337 BIR1YJR089W 2865 nt1.79□□□□□ -2.12
TY1B-NL2Q99337 MMS22YLR320W 4365 nt1.78□□□□□ -2.12
TY1B-NL2Q99337 QCR9YGR183C 201 nt1.78□□□□□ -2.12
TY1B-NL2Q99337 VMA10YHR039C-A 345 nt1.78□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 29.4 ms