Protein–RNA interactions for Protein: A2RU48

SMCO3, Single-pass membrane and coiled-coil domain-containing protein 3, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3A2RU48 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.88■□□□□ 0.29
SMCO3A2RU48 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMCO3A2RU48 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SMCO3A2RU48 AC133637.1-201ENST00000624115 1537 ntBASIC16.88■□□□□ 0.29
SMCO3A2RU48 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMCO3A2RU48 AL117332.1-201ENST00000622628 974 ntBASIC16.88■□□□□ 0.29
SMCO3A2RU48 AL031602.1-201ENST00000633169 911 ntBASIC16.88■□□□□ 0.29
SMCO3A2RU48 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMCO3A2RU48 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMCO3A2RU48 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMCO3A2RU48 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMCO3A2RU48 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMCO3A2RU48 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMCO3A2RU48 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.88■□□□□ 0.29
SMCO3A2RU48 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.88■□□□□ 0.29
SMCO3A2RU48 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMCO3A2RU48 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMCO3A2RU48 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMCO3A2RU48 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.87■□□□□ 0.29
SMCO3A2RU48 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMCO3A2RU48 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMCO3A2RU48 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SMCO3A2RU48 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC16.87■□□□□ 0.29
SMCO3A2RU48 AL451085.2-201ENST00000605085 799 ntBASIC16.87■□□□□ 0.29
SMCO3A2RU48 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMCO3A2RU48 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMCO3A2RU48 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMCO3A2RU48 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMCO3A2RU48 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMCO3A2RU48 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMCO3A2RU48 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.87■□□□□ 0.29
SMCO3A2RU48 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMCO3A2RU48 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.87■□□□□ 0.29
SMCO3A2RU48 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMCO3A2RU48 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.86■□□□□ 0.29
SMCO3A2RU48 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMCO3A2RU48 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMCO3A2RU48 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMCO3A2RU48 AL020996.1-203ENST00000536896 2307 ntBASIC16.86■□□□□ 0.29
SMCO3A2RU48 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMCO3A2RU48 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
SMCO3A2RU48 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMCO3A2RU48 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC16.86■□□□□ 0.29
SMCO3A2RU48 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.86■□□□□ 0.29
SMCO3A2RU48 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC16.86■□□□□ 0.29
SMCO3A2RU48 AC087239.1-201ENST00000622671 572 ntBASIC16.86■□□□□ 0.29
SMCO3A2RU48 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SMCO3A2RU48 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMCO3A2RU48 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
SMCO3A2RU48 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SMCO3A2RU48 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMCO3A2RU48 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMCO3A2RU48 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMCO3A2RU48 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMCO3A2RU48 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.86■□□□□ 0.29
SMCO3A2RU48 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.86■□□□□ 0.29
SMCO3A2RU48 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMCO3A2RU48 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMCO3A2RU48 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMCO3A2RU48 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMCO3A2RU48 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMCO3A2RU48 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.85■□□□□ 0.29
SMCO3A2RU48 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMCO3A2RU48 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMCO3A2RU48 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMCO3A2RU48 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.85■□□□□ 0.29
SMCO3A2RU48 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMCO3A2RU48 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMCO3A2RU48 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMCO3A2RU48 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMCO3A2RU48 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMCO3A2RU48 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC16.85■□□□□ 0.29
SMCO3A2RU48 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16.85■□□□□ 0.29
SMCO3A2RU48 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC16.85■□□□□ 0.29
SMCO3A2RU48 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC16.85■□□□□ 0.29
SMCO3A2RU48 Z92544.1-202ENST00000571933 1220 ntBASIC16.85■□□□□ 0.29
SMCO3A2RU48 pRNA.6-201ENST00000610482 90 ntBASIC16.85■□□□□ 0.29
SMCO3A2RU48 pRNA.5-201ENST00000612139 90 ntBASIC16.85■□□□□ 0.29
SMCO3A2RU48 pRNA.11-201ENST00000618423 90 ntBASIC16.85■□□□□ 0.29
SMCO3A2RU48 pRNA.13-201ENST00000619112 90 ntBASIC16.85■□□□□ 0.29
SMCO3A2RU48 AC241377.3-202ENST00000626088 1088 ntBASIC16.85■□□□□ 0.29
SMCO3A2RU48 AC241585.3-202ENST00000628937 1088 ntBASIC16.85■□□□□ 0.29
SMCO3A2RU48 AC245100.8-202ENST00000629247 1058 ntBASIC16.85■□□□□ 0.29
SMCO3A2RU48 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMCO3A2RU48 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMCO3A2RU48 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMCO3A2RU48 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMCO3A2RU48 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMCO3A2RU48 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMCO3A2RU48 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SMCO3A2RU48 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMCO3A2RU48 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMCO3A2RU48 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMCO3A2RU48 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMCO3A2RU48 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.84■□□□□ 0.29
SMCO3A2RU48 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMCO3A2RU48 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.84■□□□□ 0.29
SMCO3A2RU48 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.84■□□□□ 0.29
SMCO3A2RU48 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.84■□□□□ 0.29
SMCO3A2RU48 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 780.6 ms