Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.16■□□□□ 0.82
KRT78Q8N1N4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.16■□□□□ 0.82
KRT78Q8N1N4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
KRT78Q8N1N4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT78Q8N1N4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT78Q8N1N4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.16■□□□□ 0.82
KRT78Q8N1N4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
KRT78Q8N1N4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
KRT78Q8N1N4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT78Q8N1N4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
KRT78Q8N1N4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.15■□□□□ 0.82
KRT78Q8N1N4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT78Q8N1N4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT78Q8N1N4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
KRT78Q8N1N4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.15■□□□□ 0.82
KRT78Q8N1N4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.15■□□□□ 0.82
KRT78Q8N1N4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.15■□□□□ 0.82
KRT78Q8N1N4 DUX4L2-201ENST00000561772 1275 ntBASIC20.15■□□□□ 0.82
KRT78Q8N1N4 AC104187.1-201ENST00000607510 612 ntBASIC20.15■□□□□ 0.82
KRT78Q8N1N4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
KRT78Q8N1N4 AC120498.10-201ENST00000621827 505 ntBASIC20.15■□□□□ 0.82
KRT78Q8N1N4 DUX4L6-201ENST00000626483 1275 ntBASIC20.15■□□□□ 0.82
KRT78Q8N1N4 DUX4L1-201ENST00000627662 1275 ntBASIC20.15■□□□□ 0.82
KRT78Q8N1N4 DUX4L8-201ENST00000629013 1275 ntBASIC20.15■□□□□ 0.82
KRT78Q8N1N4 DUX4L3-201ENST00000630187 1275 ntBASIC20.15■□□□□ 0.82
KRT78Q8N1N4 DUX4L7-201ENST00000630678 1275 ntBASIC20.15■□□□□ 0.82
KRT78Q8N1N4 DUX4L5-201ENST00000630834 1275 ntBASIC20.15■□□□□ 0.82
KRT78Q8N1N4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
KRT78Q8N1N4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT78Q8N1N4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.15■□□□□ 0.82
KRT78Q8N1N4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
KRT78Q8N1N4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT78Q8N1N4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
KRT78Q8N1N4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
KRT78Q8N1N4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
KRT78Q8N1N4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KRT78Q8N1N4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT78Q8N1N4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.14■□□□□ 0.81
KRT78Q8N1N4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT78Q8N1N4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT78Q8N1N4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.14■□□□□ 0.81
KRT78Q8N1N4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT78Q8N1N4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT78Q8N1N4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.14■□□□□ 0.81
KRT78Q8N1N4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT78Q8N1N4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.14■□□□□ 0.81
KRT78Q8N1N4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.14■□□□□ 0.81
KRT78Q8N1N4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.14■□□□□ 0.81
KRT78Q8N1N4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.14■□□□□ 0.81
KRT78Q8N1N4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.14■□□□□ 0.81
KRT78Q8N1N4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.14■□□□□ 0.81
KRT78Q8N1N4 MIR6821-201ENST00000617625 74 ntBASIC20.14■□□□□ 0.81
KRT78Q8N1N4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
KRT78Q8N1N4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.14■□□□□ 0.81
KRT78Q8N1N4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KRT78Q8N1N4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KRT78Q8N1N4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
KRT78Q8N1N4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.13■□□□□ 0.81
KRT78Q8N1N4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
KRT78Q8N1N4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
KRT78Q8N1N4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.13■□□□□ 0.81
KRT78Q8N1N4 AC034268.1-201ENST00000441047 882 ntBASIC20.13■□□□□ 0.81
KRT78Q8N1N4 AC010141.2-201ENST00000452426 721 ntBASIC20.13■□□□□ 0.81
KRT78Q8N1N4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.13■□□□□ 0.81
KRT78Q8N1N4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
KRT78Q8N1N4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KRT78Q8N1N4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.13■□□□□ 0.81
KRT78Q8N1N4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
KRT78Q8N1N4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.13■□□□□ 0.81
KRT78Q8N1N4 AC061975.6-201ENST00000579045 1553 ntBASIC20.12■□□□□ 0.81
KRT78Q8N1N4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.12■□□□□ 0.81
KRT78Q8N1N4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRT78Q8N1N4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRT78Q8N1N4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.12■□□□□ 0.81
KRT78Q8N1N4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRT78Q8N1N4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
KRT78Q8N1N4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
KRT78Q8N1N4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.12■□□□□ 0.81
KRT78Q8N1N4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.12■□□□□ 0.81
KRT78Q8N1N4 AL049796.1-201ENST00000565336 1766 ntBASIC20.12■□□□□ 0.81
KRT78Q8N1N4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRT78Q8N1N4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
KRT78Q8N1N4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.11■□□□□ 0.81
KRT78Q8N1N4 AC004854.2-201ENST00000608450 1441 ntBASIC20.11■□□□□ 0.81
KRT78Q8N1N4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
KRT78Q8N1N4 AL137060.1-201ENST00000618151 2648 ntBASIC20.11■□□□□ 0.81
KRT78Q8N1N4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
KRT78Q8N1N4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KRT78Q8N1N4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KRT78Q8N1N4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
KRT78Q8N1N4 AP001160.3-201ENST00000601484 763 ntBASIC20.11■□□□□ 0.81
KRT78Q8N1N4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
KRT78Q8N1N4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.11■□□□□ 0.81
KRT78Q8N1N4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
KRT78Q8N1N4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KRT78Q8N1N4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
KRT78Q8N1N4 AC005229.4-201ENST00000610085 2198 ntBASIC20.11■□□□□ 0.81
KRT78Q8N1N4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.11■□□□□ 0.81
KRT78Q8N1N4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
KRT78Q8N1N4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms