Protein–RNA interactions for Protein: Q6Q5H1

TY1A-PR3, Transposon Ty1-PR3 Gag polyprotein, yeastyeast

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR3Q6Q5H1 YMR316C-AYMR316C-A 312 nt4.26□□□□□ -1.73
TY1A-PR3Q6Q5H1 PAN1YIR006C 4443 nt4.26□□□□□ -1.73
TY1A-PR3Q6Q5H1 POL4YCR014C 1749 nt4.26□□□□□ -1.73
TY1A-PR3Q6Q5H1 LAS21YJL062W 2493 nt4.26□□□□□ -1.73
TY1A-PR3Q6Q5H1 EBS1YDR206W 2655 nt4.25□□□□□ -1.73
TY1A-PR3Q6Q5H1 YEL075CYEL075C 369 nt4.25□□□□□ -1.73
TY1A-PR3Q6Q5H1 YHR218W-AYHR218W-A 318 nt4.25□□□□□ -1.73
TY1A-PR3Q6Q5H1 GRC3YLL035W 1899 nt4.25□□□□□ -1.73
TY1A-PR3Q6Q5H1 YMR252CYMR252C 405 nt4.25□□□□□ -1.73
TY1A-PR3Q6Q5H1 ZEO1YOL109W 342 nt4.25□□□□□ -1.73
TY1A-PR3Q6Q5H1 YBL112CYBL112C 318 nt4.25□□□□□ -1.73
TY1A-PR3Q6Q5H1 VBA2YBR293W 1425 nt4.25□□□□□ -1.73
TY1A-PR3Q6Q5H1 TGL4YKR089C 2733 nt4.25□□□□□ -1.73
TY1A-PR3Q6Q5H1 HFA1YMR207C 6372 nt4.24□□□□□ -1.73
TY1A-PR3Q6Q5H1 YDL228CYDL228C 642 nt4.24□□□□□ -1.73
TY1A-PR3Q6Q5H1 BUD13YGL174W 801 nt4.24□□□□□ -1.73
TY1A-PR3Q6Q5H1 YPS5YGL259W 498 nt4.24□□□□□ -1.73
TY1A-PR3Q6Q5H1 YHR063W-AYHR063W-A 336 nt4.24□□□□□ -1.73
TY1A-PR3Q6Q5H1 RPS4BYHR203C 786 nt4.24□□□□□ -1.73
TY1A-PR3Q6Q5H1 YLR463CYLR463C 552 nt4.24□□□□□ -1.73
TY1A-PR3Q6Q5H1 YBL028CYBL028C 321 nt4.24□□□□□ -1.73
TY1A-PR3Q6Q5H1 YMR320WYMR320W 306 nt4.24□□□□□ -1.73
TY1A-PR3Q6Q5H1 HHF2YNL030W 312 nt4.24□□□□□ -1.73
TY1A-PR3Q6Q5H1 ROY1YMR258C 1662 nt4.24□□□□□ -1.73
TY1A-PR3Q6Q5H1 SKN7YHR206W 1869 nt4.24□□□□□ -1.73
TY1A-PR3Q6Q5H1 TIF4631YGR162W 2859 nt4.24□□□□□ -1.73
TY1A-PR3Q6Q5H1 YNL193WYNL193W 1677 nt4.23□□□□□ -1.73
TY1A-PR3Q6Q5H1 MNN1YER001W 2289 nt4.23□□□□□ -1.73
TY1A-PR3Q6Q5H1 RDH54YBR073W 2877 nt4.23□□□□□ -1.73
TY1A-PR3Q6Q5H1 YDL022C-AYDL022C-A 249 nt4.23□□□□□ -1.73
TY1A-PR3Q6Q5H1 YEL053W-AYEL053W-A 348 nt4.23□□□□□ -1.73
TY1A-PR3Q6Q5H1 YEL057CYEL057C 702 nt4.23□□□□□ -1.73
TY1A-PR3Q6Q5H1 tM(CAU)Q1tM(CAU)Q1 76 nt4.23□□□□□ -1.73
TY1A-PR3Q6Q5H1 tN(GUU)CtN(GUU)C 74 nt4.23□□□□□ -1.73
TY1A-PR3Q6Q5H1 tN(GUU)FtN(GUU)F 74 nt4.23□□□□□ -1.73
TY1A-PR3Q6Q5H1 tN(GUU)GtN(GUU)G 74 nt4.23□□□□□ -1.73
TY1A-PR3Q6Q5H1 tN(GUU)KtN(GUU)K 74 nt4.23□□□□□ -1.73
TY1A-PR3Q6Q5H1 tN(GUU)LtN(GUU)L 74 nt4.23□□□□□ -1.73
TY1A-PR3Q6Q5H1 tN(GUU)N1tN(GUU)N1 74 nt4.23□□□□□ -1.73
TY1A-PR3Q6Q5H1 tN(GUU)N2tN(GUU)N2 74 nt4.23□□□□□ -1.73
TY1A-PR3Q6Q5H1 tN(GUU)O1tN(GUU)O1 74 nt4.23□□□□□ -1.73
TY1A-PR3Q6Q5H1 tN(GUU)O2tN(GUU)O2 74 nt4.23□□□□□ -1.73
TY1A-PR3Q6Q5H1 tN(GUU)PtN(GUU)P 74 nt4.23□□□□□ -1.73
TY1A-PR3Q6Q5H1 YGR073CYGR073C 372 nt4.23□□□□□ -1.73
TY1A-PR3Q6Q5H1 BIO2YGR286C 1128 nt4.23□□□□□ -1.73
TY1A-PR3Q6Q5H1 DOA1YKL213C 2148 nt4.23□□□□□ -1.73
TY1A-PR3Q6Q5H1 TEN1YLR010C 483 nt4.23□□□□□ -1.73
TY1A-PR3Q6Q5H1 OST2YOR103C 393 nt4.23□□□□□ -1.73
TY1A-PR3Q6Q5H1 IMH1YLR309C 2736 nt4.23□□□□□ -1.73
TY1A-PR3Q6Q5H1 AVT7YIL088C 1473 nt4.23□□□□□ -1.73
TY1A-PR3Q6Q5H1 YCR023CYCR023C 1836 nt4.23□□□□□ -1.73
TY1A-PR3Q6Q5H1 PEX30YLR324W 1572 nt4.23□□□□□ -1.73
TY1A-PR3Q6Q5H1 PCK1YKR097W 1650 nt4.22□□□□□ -1.73
TY1A-PR3Q6Q5H1 APC4YDR118W 1959 nt4.22□□□□□ -1.73
TY1A-PR3Q6Q5H1 YER077CYER077C 2067 nt4.22□□□□□ -1.73
TY1A-PR3Q6Q5H1 ICR1ICR1 3199 nt4.22□□□□□ -1.73
TY1A-PR3Q6Q5H1 GIP4YAL031C 2283 nt4.22□□□□□ -1.73
TY1A-PR3Q6Q5H1 PER1YCR044C 1074 nt4.22□□□□□ -1.73
TY1A-PR3Q6Q5H1 YDL068WYDL068W 330 nt4.22□□□□□ -1.73
TY1A-PR3Q6Q5H1 RPS8BYER102W 603 nt4.22□□□□□ -1.73
TY1A-PR3Q6Q5H1 YGR025WYGR025W 303 nt4.22□□□□□ -1.73
TY1A-PR3Q6Q5H1 NAG1YGR031C-A 492 nt4.22□□□□□ -1.73
TY1A-PR3Q6Q5H1 YIL021C-AYIL021C-A 270 nt4.22□□□□□ -1.73
TY1A-PR3Q6Q5H1 IST1YNL265C 897 nt4.22□□□□□ -1.73
TY1A-PR3Q6Q5H1 CHL1YPL008W 2586 nt4.22□□□□□ -1.73
TY1A-PR3Q6Q5H1 KIC1YHR102W 3243 nt4.22□□□□□ -1.73
TY1A-PR3Q6Q5H1 BEM4YPL161C 1902 nt4.21□□□□□ -1.74
TY1A-PR3Q6Q5H1 LHP1YDL051W 828 nt4.21□□□□□ -1.74
TY1A-PR3Q6Q5H1 SNA4YDL123W 423 nt4.21□□□□□ -1.74
TY1A-PR3Q6Q5H1 YGL165CYGL165C 579 nt4.21□□□□□ -1.74
TY1A-PR3Q6Q5H1 YGR053CYGR053C 852 nt4.21□□□□□ -1.74
TY1A-PR3Q6Q5H1 LAG1YHL003C 1236 nt4.21□□□□□ -1.74
TY1A-PR3Q6Q5H1 YAL031W-AYAL031W-A 309 nt4.21□□□□□ -1.74
TY1A-PR3Q6Q5H1 ATP3YBR039W 936 nt4.21□□□□□ -1.74
TY1A-PR3Q6Q5H1 YJR003CYJR003C 1560 nt4.21□□□□□ -1.74
TY1A-PR3Q6Q5H1 YPL260WYPL260W 1656 nt4.21□□□□□ -1.74
TY1A-PR3Q6Q5H1 VAC14YLR386W 2643 nt4.21□□□□□ -1.74
TY1A-PR3Q6Q5H1 UTP13YLR222C 2454 nt4.2□□□□□ -1.74
TY1A-PR3Q6Q5H1 GCN20YFR009W 2259 nt4.2□□□□□ -1.74
TY1A-PR3Q6Q5H1 ALO1YML086C 1581 nt4.2□□□□□ -1.74
TY1A-PR3Q6Q5H1 HRR25YPL204W 1485 nt4.2□□□□□ -1.74
TY1A-PR3Q6Q5H1 CWC24YLR323C 780 nt4.2□□□□□ -1.74
TY1A-PR3Q6Q5H1 YMR294W-AYMR294W-A 360 nt4.2□□□□□ -1.74
TY1A-PR3Q6Q5H1 YNL296WYNL296W 315 nt4.2□□□□□ -1.74
TY1A-PR3Q6Q5H1 MRPL50YNR022C 420 nt4.2□□□□□ -1.74
TY1A-PR3Q6Q5H1 PIS1YPR113W 663 nt4.2□□□□□ -1.74
TY1A-PR3Q6Q5H1 CEP3YMR168C 1827 nt4.2□□□□□ -1.74
TY1A-PR3Q6Q5H1 PMT6YGR199W 2280 nt4.2□□□□□ -1.74
TY1A-PR3Q6Q5H1 OPT2YPR194C 2634 nt4.2□□□□□ -1.74
TY1A-PR3Q6Q5H1 MAK5YBR142W 2322 nt4.2□□□□□ -1.74
TY1A-PR3Q6Q5H1 TDA1YMR291W 1761 nt4.19□□□□□ -1.74
TY1A-PR3Q6Q5H1 CDC14YFR028C 1656 nt4.19□□□□□ -1.74
TY1A-PR3Q6Q5H1 CYM1YDR430C 2970 nt4.19□□□□□ -1.74
TY1A-PR3Q6Q5H1 AAD3YCR107W 1092 nt4.19□□□□□ -1.74
TY1A-PR3Q6Q5H1 JLP2YMR132C 627 nt4.19□□□□□ -1.74
TY1A-PR3Q6Q5H1 NAT1YDL040C 2565 nt4.19□□□□□ -1.74
TY1A-PR3Q6Q5H1 GDE1YPL110C 3672 nt4.19□□□□□ -1.74
TY1A-PR3Q6Q5H1 RNH70YGR276C 1662 nt4.19□□□□□ -1.74
TY1A-PR3Q6Q5H1 FUI1YBL042C 1920 nt4.19□□□□□ -1.74
TY1A-PR3Q6Q5H1 REB1YBR049C 2433 nt4.19□□□□□ -1.74
Retrieved 100 of 7,029 protein–RNA pairs in 28.2 ms