Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 SIN3YOL004W 4611 nt2.45□□□□□ -2.02
RRP40Q08285 SEC26YDR238C 2922 nt2.45□□□□□ -2.02
RRP40Q08285 RRI1YDL216C 1323 nt2.44□□□□□ -2.02
RRP40Q08285 VAC14YLR386W 2643 nt2.44□□□□□ -2.02
RRP40Q08285 YCR024C-BYCR024C-B 267 nt2.44□□□□□ -2.02
RRP40Q08285 HPA3YEL066W 540 nt2.44□□□□□ -2.02
RRP40Q08285 PRE1YER012W 597 nt2.44□□□□□ -2.02
RRP40Q08285 MRPL9YGR220C 810 nt2.44□□□□□ -2.02
RRP40Q08285 YHR032W-AYHR032W-A 180 nt2.44□□□□□ -2.02
RRP40Q08285 YJR020WYJR020W 333 nt2.44□□□□□ -2.02
RRP40Q08285 SUB1YMR039C 879 nt2.44□□□□□ -2.02
RRP40Q08285 ECM13YBL043W 774 nt2.44□□□□□ -2.02
RRP40Q08285 ACM1YPL267W 630 nt2.44□□□□□ -2.02
RRP40Q08285 SWD3YBR175W 948 nt2.44□□□□□ -2.02
RRP40Q08285 DPB3YBR278W 606 nt2.44□□□□□ -2.02
RRP40Q08285 NET1YJL076W 3570 nt2.44□□□□□ -2.02
RRP40Q08285 HAA1YPR008W 2085 nt2.44□□□□□ -2.02
RRP40Q08285 PSP1YDR505C 2526 nt2.44□□□□□ -2.02
RRP40Q08285 SRP68YPL243W 1800 nt2.44□□□□□ -2.02
RRP40Q08285 RPO41YFL036W 4056 nt2.44□□□□□ -2.02
RRP40Q08285 ESL2YKR096W 3588 nt2.44□□□□□ -2.02
RRP40Q08285 YKL100CYKL100C 1764 nt2.44□□□□□ -2.02
RRP40Q08285 EAP1YKL204W 1899 nt2.43□□□□□ -2.02
RRP40Q08285 IRC3YDR332W 2070 nt2.43□□□□□ -2.02
RRP40Q08285 CWC22YGR278W 1734 nt2.43□□□□□ -2.02
RRP40Q08285 IRA2YOL081W 9240 nt2.43□□□□□ -2.02
RRP40Q08285 PET100YDR079W 336 nt2.43□□□□□ -2.02
RRP40Q08285 PEX14YGL153W 1026 nt2.43□□□□□ -2.02
RRP40Q08285 YHR213WYHR213W 597 nt2.43□□□□□ -2.02
RRP40Q08285 HOT13YKL084W 351 nt2.43□□□□□ -2.02
RRP40Q08285 YAR062WYAR062W 597 nt2.43□□□□□ -2.02
RRP40Q08285 BET5YML077W 480 nt2.43□□□□□ -2.02
RRP40Q08285 MRPL33YMR286W 261 nt2.43□□□□□ -2.02
RRP40Q08285 YOR387CYOR387C 621 nt2.43□□□□□ -2.02
RRP40Q08285 LTP1YPR073C 486 nt2.43□□□□□ -2.02
RRP40Q08285 SRO77YBL106C 3033 nt2.43□□□□□ -2.02
RRP40Q08285 KEL2YGR238C 2649 nt2.42□□□□□ -2.02
RRP40Q08285 DNF1YER166W 4716 nt2.42□□□□□ -2.02
RRP40Q08285 NUM1YDR150W 8247 nt2.42□□□□□ -2.02
RRP40Q08285 TCA17YEL048C 459 nt2.42□□□□□ -2.02
RRP40Q08285 RPL24BYGR148C 468 nt2.42□□□□□ -2.02
RRP40Q08285 VMA6YLR447C 1038 nt2.42□□□□□ -2.02
RRP40Q08285 INP1YMR204C 1263 nt2.42□□□□□ -2.02
RRP40Q08285 IZH4YOL101C 939 nt2.42□□□□□ -2.02
RRP40Q08285 RPB8YOR224C 441 nt2.42□□□□□ -2.02
RRP40Q08285 SRL1YOR247W 633 nt2.42□□□□□ -2.02
RRP40Q08285 YBR085C-AYBR085C-A 258 nt2.42□□□□□ -2.02
RRP40Q08285 CWH41YGL027C 2502 nt2.42□□□□□ -2.02
RRP40Q08285 ISW1YBR245C 3390 nt2.42□□□□□ -2.02
RRP40Q08285 RRP14YKL082C 1305 nt2.42□□□□□ -2.02
RRP40Q08285 DSE4YNR067C 3354 nt2.41□□□□□ -2.02
RRP40Q08285 MET6YER091C 2304 nt2.41□□□□□ -2.02
RRP40Q08285 PTP3YER075C 2787 nt2.41□□□□□ -2.02
RRP40Q08285 UPF3YGR072W 1164 nt2.41□□□□□ -2.02
RRP40Q08285 YIL102C-AYIL102C-A 228 nt2.41□□□□□ -2.02
RRP40Q08285 LSM8YJR022W 330 nt2.41□□□□□ -2.02
RRP40Q08285 YLL047WYLL047W 384 nt2.41□□□□□ -2.02
RRP40Q08285 RIF2YLR453C 1188 nt2.41□□□□□ -2.02
RRP40Q08285 YOL114CYOL114C 609 nt2.41□□□□□ -2.02
RRP40Q08285 YBR201C-AYBR201C-A 204 nt2.41□□□□□ -2.02
RRP40Q08285 CTP1YBR291C 900 nt2.41□□□□□ -2.02
RRP40Q08285 TOR1YJR066W 7413 nt2.41□□□□□ -2.02
RRP40Q08285 PSY2YNL201C 2577 nt2.41□□□□□ -2.02
RRP40Q08285 SIR3YLR442C 2937 nt2.41□□□□□ -2.02
RRP40Q08285 GIN4YDR507C 3429 nt2.4□□□□□ -2.02
RRP40Q08285 YDR034C-DYDR034C-D 5313 nt2.4□□□□□ -2.02
RRP40Q08285 PDR1YGL013C 3207 nt2.4□□□□□ -2.02
RRP40Q08285 YDR336WYDR336W 945 nt2.4□□□□□ -2.03
RRP40Q08285 YGR293CYGR293C 462 nt2.4□□□□□ -2.03
RRP40Q08285 GAB1YLR459W 1185 nt2.4□□□□□ -2.03
RRP40Q08285 YMR194C-AYMR194C-A 225 nt2.4□□□□□ -2.03
RRP40Q08285 MPD2YOL088C 834 nt2.4□□□□□ -2.03
RRP40Q08285 VHR2YER064C 1518 nt2.4□□□□□ -2.03
RRP40Q08285 SKO1YNL167C 1944 nt2.4□□□□□ -2.03
RRP40Q08285 NEW1YPL226W 3591 nt2.4□□□□□ -2.03
RRP40Q08285 POL4YCR014C 1749 nt2.39□□□□□ -2.03
RRP40Q08285 STN1YDR082W 1485 nt2.39□□□□□ -2.03
RRP40Q08285 RTT10YPL183C 3042 nt2.39□□□□□ -2.03
RRP40Q08285 YCK2YNL154C 1641 nt2.39□□□□□ -2.03
RRP40Q08285 SLY41YOR307C 1362 nt2.39□□□□□ -2.03
RRP40Q08285 RGR1YLR071C 3249 nt2.39□□□□□ -2.03
RRP40Q08285 YPP1YGR198W 2454 nt2.39□□□□□ -2.03
RRP40Q08285 SPT15YER148W 723 nt2.39□□□□□ -2.03
RRP40Q08285 TDA10YGR205W 873 nt2.39□□□□□ -2.03
RRP40Q08285 RPA12YJR063W 378 nt2.39□□□□□ -2.03
RRP40Q08285 YAL034C-BYAL034C-B 354 nt2.39□□□□□ -2.03
RRP40Q08285 DAD2YKR083C 402 nt2.39□□□□□ -2.03
RRP40Q08285 YNL234WYNL234W 1281 nt2.39□□□□□ -2.03
RRP40Q08285 RRD2YPL152W 1077 nt2.39□□□□□ -2.03
RRP40Q08285 ICS2YBR157C 768 nt2.39□□□□□ -2.03
RRP40Q08285 YNR066CYNR066C 1311 nt2.39□□□□□ -2.03
RRP40Q08285 BNR1YIL159W 4128 nt2.39□□□□□ -2.03
RRP40Q08285 BUB1YGR188C 3066 nt2.38□□□□□ -2.03
RRP40Q08285 AVT5YBL089W 1380 nt2.38□□□□□ -2.03
RRP40Q08285 BAT1YHR208W 1182 nt2.38□□□□□ -2.03
RRP40Q08285 PDR3YBL005W 2931 nt2.38□□□□□ -2.03
RRP40Q08285 YOR050CYOR050C 348 nt2.38□□□□□ -2.03
RRP40Q08285 snR43snR43 209 nt2.38□□□□□ -2.03
RRP40Q08285 YKR078WYKR078W 1758 nt2.38□□□□□ -2.03
RRP40Q08285 PEX5YDR244W 1839 nt2.38□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 38.2 ms