Protein–RNA interactions for Protein: P38353

SSH1, Sec sixty-one protein homolog, yeastyeast

Known RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH1P38353 SUB1YMR039C 879 nt2.37□□□□□ -2.03
SSH1P38353 ATP3YBR039W 936 nt2.37□□□□□ -2.03
SSH1P38353 YBR292CYBR292C 372 nt2.37□□□□□ -2.03
SSH1P38353 RED1YLR263W 2484 nt2.37□□□□□ -2.03
SSH1P38353 MSB2YGR014W 3921 nt2.37□□□□□ -2.03
SSH1P38353 PEX6YNL329C 3093 nt2.37□□□□□ -2.03
SSH1P38353 YGL176CYGL176C 1665 nt2.37□□□□□ -2.03
SSH1P38353 KRE33YNL132W 3171 nt2.37□□□□□ -2.03
SSH1P38353 BNR1YIL159W 4128 nt2.36□□□□□ -2.03
SSH1P38353 SLP1YOR154W 1764 nt2.36□□□□□ -2.03
SSH1P38353 PSD2YGR170W 3417 nt2.36□□□□□ -2.03
SSH1P38353 tC(GCA)BtC(GCA)B 72 nt2.36□□□□□ -2.03
SSH1P38353 tC(GCA)GtC(GCA)G 72 nt2.36□□□□□ -2.03
SSH1P38353 tC(GCA)P1tC(GCA)P1 72 nt2.36□□□□□ -2.03
SSH1P38353 tC(GCA)P2tC(GCA)P2 72 nt2.36□□□□□ -2.03
SSH1P38353 YDR320W-BYDR320W-B 138 nt2.36□□□□□ -2.03
SSH1P38353 YIP5YGL161C 933 nt2.36□□□□□ -2.03
SSH1P38353 MRPL9YGR220C 810 nt2.36□□□□□ -2.03
SSH1P38353 MET14YKL001C 609 nt2.36□□□□□ -2.03
SSH1P38353 YKL033W-AYKL033W-A 711 nt2.36□□□□□ -2.03
SSH1P38353 PBP2YBR233W 1242 nt2.36□□□□□ -2.03
SSH1P38353 RLI1YDR091C 1827 nt2.35□□□□□ -2.03
SSH1P38353 IRC3YDR332W 2070 nt2.35□□□□□ -2.03
SSH1P38353 21S_rRNA21S_rRNA 3296 nt2.35□□□□□ -2.03
SSH1P38353 YDR193WYDR193W 399 nt2.35□□□□□ -2.03
SSH1P38353 MFA1YDR461W 111 nt2.35□□□□□ -2.03
SSH1P38353 SPT15YER148W 723 nt2.35□□□□□ -2.03
SSH1P38353 YAL034C-BYAL034C-B 354 nt2.35□□□□□ -2.03
SSH1P38353 PRM6YML047C 1059 nt2.35□□□□□ -2.03
SSH1P38353 YNL203CYNL203C 612 nt2.35□□□□□ -2.03
SSH1P38353 YOL114CYOL114C 609 nt2.35□□□□□ -2.03
SSH1P38353 TIM12YBR091C 330 nt2.35□□□□□ -2.03
SSH1P38353 BCK1YJL095W 4437 nt2.35□□□□□ -2.03
SSH1P38353 PSP1YDR505C 2526 nt2.35□□□□□ -2.03
SSH1P38353 YNL011CYNL011C 1335 nt2.35□□□□□ -2.03
SSH1P38353 NUM1YDR150W 8247 nt2.35□□□□□ -2.03
SSH1P38353 FAR11YNL127W 2862 nt2.34□□□□□ -2.03
SSH1P38353 BAT1YHR208W 1182 nt2.34□□□□□ -2.03
SSH1P38353 YKL070WYKL070W 510 nt2.34□□□□□ -2.03
SSH1P38353 RPL8BYLL045C 771 nt2.34□□□□□ -2.03
SSH1P38353 RPS29AYLR388W 171 nt2.34□□□□□ -2.03
SSH1P38353 BET5YML077W 480 nt2.34□□□□□ -2.03
SSH1P38353 YNL043CYNL043C 321 nt2.34□□□□□ -2.03
SSH1P38353 PDR17YNL264C 1053 nt2.34□□□□□ -2.03
SSH1P38353 ATG3YNR007C 933 nt2.34□□□□□ -2.03
SSH1P38353 CSH1YBR161W 1131 nt2.34□□□□□ -2.03
SSH1P38353 DPB3YBR278W 606 nt2.34□□□□□ -2.03
SSH1P38353 VAC14YLR386W 2643 nt2.34□□□□□ -2.04
SSH1P38353 POL4YCR014C 1749 nt2.34□□□□□ -2.04
SSH1P38353 YKL100CYKL100C 1764 nt2.33□□□□□ -2.04
SSH1P38353 SNU23YDL098C 585 nt2.33□□□□□ -2.04
SSH1P38353 YER079C-AYER079C-A 339 nt2.33□□□□□ -2.04
SSH1P38353 RPA12YJR063W 378 nt2.33□□□□□ -2.04
SSH1P38353 PEX15YOL044W 1152 nt2.33□□□□□ -2.04
SSH1P38353 RRG7YOR305W 729 nt2.33□□□□□ -2.04
SSH1P38353 YBR085C-AYBR085C-A 258 nt2.33□□□□□ -2.04
SSH1P38353 YDR034C-DYDR034C-D 5313 nt2.33□□□□□ -2.04
SSH1P38353 YDR210W-BYDR210W-B 5313 nt2.33□□□□□ -2.04
SSH1P38353 YLR410W-BYLR410W-B 5313 nt2.33□□□□□ -2.04
SSH1P38353 CWH41YGL027C 2502 nt2.33□□□□□ -2.04
SSH1P38353 YPL216WYPL216W 3309 nt2.33□□□□□ -2.04
SSH1P38353 TCB2YNL087W 3537 nt2.33□□□□□ -2.04
SSH1P38353 STN1YDR082W 1485 nt2.33□□□□□ -2.04
SSH1P38353 NAB3YPL190C 2409 nt2.32□□□□□ -2.04
SSH1P38353 YHR078WYHR078W 1659 nt2.32□□□□□ -2.04
SSH1P38353 YPL150WYPL150W 2706 nt2.32□□□□□ -2.04
SSH1P38353 RPL24BYGR148C 468 nt2.32□□□□□ -2.04
SSH1P38353 TDA10YGR205W 873 nt2.32□□□□□ -2.04
SSH1P38353 VMA6YLR447C 1038 nt2.32□□□□□ -2.04
SSH1P38353 YMR099CYMR099C 894 nt2.32□□□□□ -2.04
SSH1P38353 ATG34YOL083W 1239 nt2.32□□□□□ -2.04
SSH1P38353 SWD3YBR175W 948 nt2.32□□□□□ -2.04
SSH1P38353 VHR1YIL056W 1923 nt2.32□□□□□ -2.04
SSH1P38353 AVT5YBL089W 1380 nt2.32□□□□□ -2.04
SSH1P38353 AI2Q0055 2565 nt2.32□□□□□ -2.04
SSH1P38353 YKR078WYKR078W 1758 nt2.31□□□□□ -2.04
SSH1P38353 PEX5YDR244W 1839 nt2.31□□□□□ -2.04
SSH1P38353 SKO1YNL167C 1944 nt2.31□□□□□ -2.04
SSH1P38353 YDL032WYDL032W 312 nt2.31□□□□□ -2.04
SSH1P38353 DAD2YKR083C 402 nt2.31□□□□□ -2.04
SSH1P38353 RPL6BYLR448W 531 nt2.31□□□□□ -2.04
SSH1P38353 CTL1YMR180C 963 nt2.31□□□□□ -2.04
SSH1P38353 YNL276CYNL276C 396 nt2.31□□□□□ -2.04
SSH1P38353 GRX7YBR014C 612 nt2.31□□□□□ -2.04
SSH1P38353 CCL1YPR025C 1182 nt2.31□□□□□ -2.04
SSH1P38353 YBR201C-AYBR201C-A 204 nt2.31□□□□□ -2.04
SSH1P38353 MPS1YDL028C 2295 nt2.31□□□□□ -2.04
SSH1P38353 AVT2YEL064C 1443 nt2.31□□□□□ -2.04
SSH1P38353 YIL080WYIL080W 4722 nt2.31□□□□□ -2.04
SSH1P38353 RPO41YFL036W 4056 nt2.31□□□□□ -2.04
SSH1P38353 KEL2YGR238C 2649 nt2.3□□□□□ -2.04
SSH1P38353 DBP10YDL031W 2988 nt2.3□□□□□ -2.04
SSH1P38353 MRP10YDL045W-A 288 nt2.3□□□□□ -2.04
SSH1P38353 AI3Q0060 1248 nt2.3□□□□□ -2.04
SSH1P38353 YDR124WYDR124W 975 nt2.3□□□□□ -2.04
SSH1P38353 HLR1YDR528W 1272 nt2.3□□□□□ -2.04
SSH1P38353 YFR032C-BYFR032C-B 264 nt2.3□□□□□ -2.04
SSH1P38353 COX14YML129C 213 nt2.3□□□□□ -2.04
SSH1P38353 KTI11YBL071W-A 249 nt2.3□□□□□ -2.04
SSH1P38353 THI80YOR143C 960 nt2.3□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 28.8 ms