Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 VRG4YGL225W 1014 nt10.72□□□□□ -0.69
UFD2P54860 YJL055WYJL055W 738 nt10.72□□□□□ -0.69
UFD2P54860 GND2YGR256W 1479 nt10.72□□□□□ -0.69
UFD2P54860 TRT2tT(CGU)K 72 nt10.71□□□□□ -0.69
UFD2P54860 PBP1YGR178C 2169 nt10.7□□□□□ -0.7
UFD2P54860 YJR154WYJR154W 1041 nt10.7□□□□□ -0.7
UFD2P54860 ADH7YCR105W 1086 nt10.69□□□□□ -0.7
UFD2P54860 SSN3YPL042C 1668 nt10.69□□□□□ -0.7
UFD2P54860 ZRT3YKL175W 1512 nt10.68□□□□□ -0.7
UFD2P54860 URA6YKL024C 615 nt10.66□□□□□ -0.7
UFD2P54860 GPN2YOR262W 1044 nt10.65□□□□□ -0.7
UFD2P54860 BNI5YNL166C 1347 nt10.64□□□□□ -0.71
UFD2P54860 CYT2YKL087C 675 nt10.64□□□□□ -0.71
UFD2P54860 OYE3YPL171C 1203 nt10.64□□□□□ -0.71
UFD2P54860 PAU15YIR041W 375 nt10.63□□□□□ -0.71
UFD2P54860 PHO23YNL097C 993 nt10.63□□□□□ -0.71
UFD2P54860 LSB5YCL034W 1065 nt10.63□□□□□ -0.71
UFD2P54860 YJL118WYJL118W 660 nt10.61□□□□□ -0.71
UFD2P54860 MSC1YML128C 1542 nt10.61□□□□□ -0.71
UFD2P54860 SAM3YPL274W 1764 nt10.6□□□□□ -0.71
UFD2P54860 SAM2YDR502C 1155 nt10.6□□□□□ -0.71
UFD2P54860 CPD1YGR247W 720 nt10.6□□□□□ -0.71
UFD2P54860 NUC1YJL208C 990 nt10.6□□□□□ -0.71
UFD2P54860 Q0010Q0010 387 nt10.59□□□□□ -0.71
UFD2P54860 SEC61YLR378C 1443 nt10.58□□□□□ -0.72
UFD2P54860 OXA1YER154W 1209 nt10.58□□□□□ -0.72
UFD2P54860 YJL067WYJL067W 351 nt10.58□□□□□ -0.72
UFD2P54860 RPT5YOR117W 1305 nt10.58□□□□□ -0.72
UFD2P54860 GAL3YDR009W 1563 nt10.57□□□□□ -0.72
UFD2P54860 PET8YNL003C 855 nt10.57□□□□□ -0.72
UFD2P54860 YEL009C-AYEL009C-A 408 nt10.56□□□□□ -0.72
UFD2P54860 FRE6YLL051C 2139 nt10.54□□□□□ -0.72
UFD2P54860 CCT5YJR064W 1689 nt10.53□□□□□ -0.72
UFD2P54860 YER188WYER188W 720 nt10.52□□□□□ -0.73
UFD2P54860 FUB1YCR076C 753 nt10.51□□□□□ -0.73
UFD2P54860 CMP2YML057W 1815 nt10.51□□□□□ -0.73
UFD2P54860 FLR1YBR008C 1647 nt10.51□□□□□ -0.73
UFD2P54860 RPM1RPM1 483 nt10.5□□□□□ -0.73
UFD2P54860 RIB7YBR153W 735 nt10.5□□□□□ -0.73
UFD2P54860 DLD2YDL178W 1593 nt10.49□□□□□ -0.73
UFD2P54860 ESS1YJR017C 513 nt10.47□□□□□ -0.73
UFD2P54860 RAS2YNL098C 969 nt10.47□□□□□ -0.73
UFD2P54860 RSC8YFR037C 1674 nt10.47□□□□□ -0.73
UFD2P54860 TPS1YBR126C 1488 nt10.46□□□□□ -0.74
UFD2P54860 YPS3YLR121C 1527 nt10.45□□□□□ -0.74
UFD2P54860 FMS1YMR020W 1527 nt10.45□□□□□ -0.74
UFD2P54860 OYE2YHR179W 1203 nt10.45□□□□□ -0.74
UFD2P54860 REG2YBR050C 1017 nt10.45□□□□□ -0.74
UFD2P54860 HSL7YBR133C 2484 nt10.44□□□□□ -0.74
UFD2P54860 tS(GCU)LtS(GCU)L 80 nt10.44□□□□□ -0.74
UFD2P54860 SNZ1YMR096W 894 nt10.44□□□□□ -0.74
UFD2P54860 RDN25-1RDN25-1 3396 nt10.44□□□□□ -0.74
UFD2P54860 RDN25-2RDN25-2 3396 nt10.44□□□□□ -0.74
UFD2P54860 YAT1YAR035W 2064 nt10.43□□□□□ -0.74
UFD2P54860 EAF3YPR023C 1206 nt10.43□□□□□ -0.74
UFD2P54860 THI72YOR192C 1800 nt10.42□□□□□ -0.74
UFD2P54860 CWC15YDR163W 528 nt10.41□□□□□ -0.74
UFD2P54860 SPP2YOR148C 558 nt10.41□□□□□ -0.74
UFD2P54860 OSH7YHR001W 1314 nt10.38□□□□□ -0.75
UFD2P54860 HEM13YDR044W 987 nt10.38□□□□□ -0.75
UFD2P54860 YPR126CYPR126C 309 nt10.38□□□□□ -0.75
UFD2P54860 ACH1YBL015W 1581 nt10.37□□□□□ -0.75
UFD2P54860 PGC1YPL206C 966 nt10.37□□□□□ -0.75
UFD2P54860 PAB1YER165W 1734 nt10.36□□□□□ -0.75
UFD2P54860 PAU5YFL020C 369 nt10.36□□□□□ -0.75
UFD2P54860 TAF13YML098W 504 nt10.36□□□□□ -0.75
UFD2P54860 DAK2YFL053W 1776 nt10.35□□□□□ -0.75
UFD2P54860 TMA23YMR269W 636 nt10.34□□□□□ -0.75
UFD2P54860 SOL2YCR073W-A 948 nt10.33□□□□□ -0.76
UFD2P54860 DDI1YER143W 1287 nt10.33□□□□□ -0.76
UFD2P54860 INA1YLR413W 2028 nt10.33□□□□□ -0.76
UFD2P54860 RPC82YPR190C 1965 nt10.31□□□□□ -0.76
UFD2P54860 TAT2YOL020W 1779 nt10.31□□□□□ -0.76
UFD2P54860 CTI6YPL181W 1521 nt10.3□□□□□ -0.76
UFD2P54860 YBR232CYBR232C 360 nt10.3□□□□□ -0.76
UFD2P54860 LSM5YER146W 282 nt10.29□□□□□ -0.76
UFD2P54860 STP3YLR375W 1032 nt10.29□□□□□ -0.76
UFD2P54860 ARA2YMR041C 1008 nt10.29□□□□□ -0.76
UFD2P54860 YMR262WYMR262W 942 nt10.29□□□□□ -0.76
UFD2P54860 MHF1YOL086W-A 273 nt10.29□□□□□ -0.76
UFD2P54860 VPS62YGR141W 1404 nt10.27□□□□□ -0.77
UFD2P54860 YDR455CYDR455C 309 nt10.26□□□□□ -0.77
UFD2P54860 IMO32YGR031W 1029 nt10.26□□□□□ -0.77
UFD2P54860 POT1YIL160C 1254 nt10.26□□□□□ -0.77
UFD2P54860 SEN2YLR105C 1134 nt10.26□□□□□ -0.77
UFD2P54860 YLR122CYLR122C 378 nt10.26□□□□□ -0.77
UFD2P54860 IML3YBR107C 738 nt10.26□□□□□ -0.77
UFD2P54860 YIL100C-AYIL100C-A 339 nt10.25□□□□□ -0.77
UFD2P54860 YNL024CYNL024C 741 nt10.25□□□□□ -0.77
UFD2P54860 LCP5YER127W 1074 nt10.23□□□□□ -0.77
UFD2P54860 PAM17YKR065C 594 nt10.23□□□□□ -0.77
UFD2P54860 YDL086WYDL086W 822 nt10.21□□□□□ -0.77
UFD2P54860 URH1YDR400W 1023 nt10.21□□□□□ -0.77
UFD2P54860 APS2YJR058C 444 nt10.2□□□□□ -0.78
UFD2P54860 ASP3-1YLR155C 1089 nt10.2□□□□□ -0.78
UFD2P54860 ASP3-2YLR157C 1089 nt10.2□□□□□ -0.78
UFD2P54860 ASP3-3YLR158C 1089 nt10.2□□□□□ -0.78
UFD2P54860 ASP3-4YLR160C 1089 nt10.2□□□□□ -0.78
UFD2P54860 GSF2YML048W 1212 nt10.2□□□□□ -0.78
UFD2P54860 TUB4YLR212C 1422 nt10.19□□□□□ -0.78
Retrieved 100 of 7,029 protein–RNA pairs in 41.2 ms