Protein–RNA interactions for Protein: P39111

VMA7, V-type proton ATPase subunit F, yeastyeast

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA7P39111 tD(GUC)BtD(GUC)B 72 nt8.16□□□□□ -1.1
VMA7P39111 tD(GUC)DtD(GUC)D 72 nt8.16□□□□□ -1.1
VMA7P39111 tD(GUC)G1tD(GUC)G1 72 nt8.16□□□□□ -1.1
VMA7P39111 tD(GUC)G2tD(GUC)G2 72 nt8.16□□□□□ -1.1
VMA7P39111 tD(GUC)I1tD(GUC)I1 72 nt8.16□□□□□ -1.1
VMA7P39111 tD(GUC)I2tD(GUC)I2 72 nt8.16□□□□□ -1.1
VMA7P39111 tD(GUC)J1tD(GUC)J1 72 nt8.16□□□□□ -1.1
VMA7P39111 tD(GUC)J2tD(GUC)J2 72 nt8.16□□□□□ -1.1
VMA7P39111 tD(GUC)J3tD(GUC)J3 72 nt8.16□□□□□ -1.1
VMA7P39111 tD(GUC)J4tD(GUC)J4 72 nt8.16□□□□□ -1.1
VMA7P39111 tD(GUC)KtD(GUC)K 72 nt8.16□□□□□ -1.1
VMA7P39111 tD(GUC)L1tD(GUC)L1 72 nt8.16□□□□□ -1.1
VMA7P39111 tD(GUC)L2tD(GUC)L2 72 nt8.16□□□□□ -1.1
VMA7P39111 tD(GUC)MtD(GUC)M 72 nt8.16□□□□□ -1.1
VMA7P39111 tD(GUC)OtD(GUC)O 72 nt8.16□□□□□ -1.1
VMA7P39111 YML089CYML089C 369 nt8.16□□□□□ -1.1
VMA7P39111 LPD1YFL018C 1500 nt8.15□□□□□ -1.1
VMA7P39111 LSB5YCL034W 1065 nt8.14□□□□□ -1.11
VMA7P39111 TOA2YKL058W 369 nt8.13□□□□□ -1.11
VMA7P39111 HBS1YKR084C 1836 nt8.13□□□□□ -1.11
VMA7P39111 TIM44YIL022W 1296 nt8.12□□□□□ -1.11
VMA7P39111 UBX6YJL048C 1191 nt8.12□□□□□ -1.11
VMA7P39111 YPS3YLR121C 1527 nt8.12□□□□□ -1.11
VMA7P39111 YMR262WYMR262W 942 nt8.11□□□□□ -1.11
VMA7P39111 BRR1YPR057W 1026 nt8.11□□□□□ -1.11
VMA7P39111 YSP3YOR003W 1437 nt8.11□□□□□ -1.11
VMA7P39111 TRT2tT(CGU)K 72 nt8.1□□□□□ -1.11
VMA7P39111 YAR028WYAR028W 705 nt8.1□□□□□ -1.11
VMA7P39111 GND2YGR256W 1479 nt8.1□□□□□ -1.11
VMA7P39111 FLR1YBR008C 1647 nt8.1□□□□□ -1.11
VMA7P39111 YPL251WYPL251W 303 nt8.09□□□□□ -1.11
VMA7P39111 TPN1YGL186C 1740 nt8.09□□□□□ -1.11
VMA7P39111 FET5YFL041W 1869 nt8.08□□□□□ -1.12
VMA7P39111 RPD3YNL330C 1302 nt8.07□□□□□ -1.12
VMA7P39111 SPP1YPL138C 1062 nt8.07□□□□□ -1.12
VMA7P39111 DUR3YHL016C 2208 nt8.05□□□□□ -1.12
VMA7P39111 ALR1YOL130W 2580 nt8.04□□□□□ -1.12
VMA7P39111 DUS3YLR401C 2007 nt8.04□□□□□ -1.12
VMA7P39111 DLD3YEL071W 1491 nt8.04□□□□□ -1.12
VMA7P39111 LSM5YER146W 282 nt8.03□□□□□ -1.12
VMA7P39111 TOM6YOR045W 186 nt8.02□□□□□ -1.13
VMA7P39111 RIM2YBR192W 1134 nt8.02□□□□□ -1.13
VMA7P39111 MTG2YHR168W 1557 nt8.01□□□□□ -1.13
VMA7P39111 INH1YDL181W 258 nt8.01□□□□□ -1.13
VMA7P39111 TIF6YPR016C 738 nt8.01□□□□□ -1.13
VMA7P39111 DLD2YDL178W 1593 nt8□□□□□ -1.13
VMA7P39111 TOM71YHR117W 1920 nt7.99□□□□□ -1.13
VMA7P39111 HIP1YGR191W 1812 nt7.99□□□□□ -1.13
VMA7P39111 SAM2YDR502C 1155 nt7.99□□□□□ -1.13
VMA7P39111 POP2YNR052C 1302 nt7.99□□□□□ -1.13
VMA7P39111 HEM13YDR044W 987 nt7.98□□□□□ -1.13
VMA7P39111 UTH1YKR042W 1098 nt7.98□□□□□ -1.13
VMA7P39111 RPC31YNL151C 756 nt7.98□□□□□ -1.13
VMA7P39111 YHL019W-AYHL019W-A 594 nt7.96□□□□□ -1.14
VMA7P39111 ORT1YOR130C 879 nt7.96□□□□□ -1.14
VMA7P39111 DPL1YDR294C 1770 nt7.96□□□□□ -1.14
VMA7P39111 MET30YIL046W 1923 nt7.95□□□□□ -1.14
VMA7P39111 AIM1YAL046C 357 nt7.95□□□□□ -1.14
VMA7P39111 YLR046CYLR046C 813 nt7.95□□□□□ -1.14
VMA7P39111 PRE6YOL038W 765 nt7.95□□□□□ -1.14
VMA7P39111 LEU4YNL104C 1860 nt7.95□□□□□ -1.14
VMA7P39111 SFA1YDL168W 1161 nt7.94□□□□□ -1.14
VMA7P39111 tL(GAG)GtL(GAG)G 82 nt7.94□□□□□ -1.14
VMA7P39111 YMR103CYMR103C 363 nt7.94□□□□□ -1.14
VMA7P39111 YNL190WYNL190W 615 nt7.94□□□□□ -1.14
VMA7P39111 snR4snR4 186 nt7.94□□□□□ -1.14
VMA7P39111 MSF1YPR047W 1410 nt7.94□□□□□ -1.14
VMA7P39111 ADE16YLR028C 1776 nt7.93□□□□□ -1.14
VMA7P39111 AKR2YOR034C 2250 nt7.92□□□□□ -1.14
VMA7P39111 SFL1YOR140W 2301 nt7.92□□□□□ -1.14
VMA7P39111 YNL115CYNL115C 1935 nt7.92□□□□□ -1.14
VMA7P39111 VMA11YPL234C 495 nt7.92□□□□□ -1.14
VMA7P39111 SEC61YLR378C 1443 nt7.92□□□□□ -1.14
VMA7P39111 NPP2YEL016C 1482 nt7.92□□□□□ -1.14
VMA7P39111 KRR1YCL059C 951 nt7.91□□□□□ -1.14
VMA7P39111 OXA1YER154W 1209 nt7.91□□□□□ -1.14
VMA7P39111 ITR2YOL103W 1830 nt7.9□□□□□ -1.14
VMA7P39111 PEX2YJL210W 816 nt7.9□□□□□ -1.14
VMA7P39111 ENT4YLL038C 744 nt7.89□□□□□ -1.15
VMA7P39111 VPS75YNL246W 795 nt7.89□□□□□ -1.15
VMA7P39111 LAS17YOR181W 1902 nt7.89□□□□□ -1.15
VMA7P39111 HXT11YOL156W 1704 nt7.88□□□□□ -1.15
VMA7P39111 TRP2YER090W 1524 nt7.88□□□□□ -1.15
VMA7P39111 HXT12YIL170W 1374 nt7.87□□□□□ -1.15
VMA7P39111 MOT3YMR070W 1473 nt7.87□□□□□ -1.15
VMA7P39111 ALP1YNL270C 1722 nt7.86□□□□□ -1.15
VMA7P39111 tE(CUC)DtE(CUC)D 72 nt7.85□□□□□ -1.15
VMA7P39111 tE(CUC)ItE(CUC)I 72 nt7.85□□□□□ -1.15
VMA7P39111 PFS2YNL317W 1398 nt7.84□□□□□ -1.15
VMA7P39111 MET28YIR017C 564 nt7.84□□□□□ -1.15
VMA7P39111 SNX3YOR357C 489 nt7.84□□□□□ -1.15
VMA7P39111 TIP1YBR067C 633 nt7.84□□□□□ -1.15
VMA7P39111 THI6YPL214C 1623 nt7.84□□□□□ -1.15
VMA7P39111 SRM1YGL097W 1449 nt7.82□□□□□ -1.16
VMA7P39111 YER188WYER188W 720 nt7.81□□□□□ -1.16
VMA7P39111 HSV2YGR223C 1347 nt7.8□□□□□ -1.16
VMA7P39111 YDR010CYDR010C 333 nt7.8□□□□□ -1.16
VMA7P39111 YDR467CYDR467C 327 nt7.8□□□□□ -1.16
VMA7P39111 AIM34YMR003W 597 nt7.8□□□□□ -1.16
VMA7P39111 PEX25YPL112C 1185 nt7.8□□□□□ -1.16
Retrieved 100 of 7,029 protein–RNA pairs in 10.3 ms