Protein–RNA interactions for Protein: P35732

DEF1, RNA polymerase II degradation factor 1, yeastyeast

Known RBP Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DEF1P35732 YOR325WYOR325W 474 nt9.67□□□□□ -0.86
DEF1P35732 RPL4BYDR012W 1089 nt9.66□□□□□ -0.86
DEF1P35732 RPL4AYBR031W 1089 nt9.66□□□□□ -0.86
DEF1P35732 NDE1YMR145C 1683 nt9.65□□□□□ -0.86
DEF1P35732 YML089CYML089C 369 nt9.65□□□□□ -0.86
DEF1P35732 RTN2YDL204W 1182 nt9.64□□□□□ -0.87
DEF1P35732 TOM6YOR045W 186 nt9.64□□□□□ -0.87
DEF1P35732 PRO1YDR300C 1287 nt9.62□□□□□ -0.87
DEF1P35732 HIP1YGR191W 1812 nt9.61□□□□□ -0.87
DEF1P35732 LAS17YOR181W 1902 nt9.61□□□□□ -0.87
DEF1P35732 CLB6YGR109C 1143 nt9.61□□□□□ -0.87
DEF1P35732 RPS14BYJL191W 417 nt9.61□□□□□ -0.87
DEF1P35732 RSC8YFR037C 1674 nt9.61□□□□□ -0.87
DEF1P35732 YEL023CYEL023C 2049 nt9.6□□□□□ -0.87
DEF1P35732 PMA2YPL036W 2844 nt9.6□□□□□ -0.87
DEF1P35732 FRT1YOR324C 1809 nt9.59□□□□□ -0.87
DEF1P35732 RBG2YGR173W 1107 nt9.59□□□□□ -0.87
DEF1P35732 UTH1YKR042W 1098 nt9.59□□□□□ -0.87
DEF1P35732 PEX2YJL210W 816 nt9.58□□□□□ -0.88
DEF1P35732 CCR4YAL021C 2514 nt9.57□□□□□ -0.88
DEF1P35732 YMR226CYMR226C 804 nt9.57□□□□□ -0.88
DEF1P35732 TIF6YPR016C 738 nt9.57□□□□□ -0.88
DEF1P35732 ATG15YCR068W 1563 nt9.56□□□□□ -0.88
DEF1P35732 PLB1YMR008C 1995 nt9.55□□□□□ -0.88
DEF1P35732 BEM1YBR200W 1656 nt9.53□□□□□ -0.88
DEF1P35732 MET28YIR017C 564 nt9.53□□□□□ -0.88
DEF1P35732 HIF1YLL022C 1158 nt9.53□□□□□ -0.88
DEF1P35732 YRF1-2YER190W 5046 nt9.52□□□□□ -0.89
DEF1P35732 SSL2YIL143C 2532 nt9.51□□□□□ -0.89
DEF1P35732 YDR510C-AYDR510C-A 117 nt9.5□□□□□ -0.89
DEF1P35732 HXT1YHR094C 1713 nt9.5□□□□□ -0.89
DEF1P35732 MTG2YHR168W 1557 nt9.5□□□□□ -0.89
DEF1P35732 GUT1YHL032C 2130 nt9.49□□□□□ -0.89
DEF1P35732 TSC10YBR265W 963 nt9.49□□□□□ -0.89
DEF1P35732 QDR2YIL121W 1629 nt9.49□□□□□ -0.89
DEF1P35732 STF1YDL130W-A 261 nt9.48□□□□□ -0.89
DEF1P35732 SGA1YIL099W 1650 nt9.48□□□□□ -0.89
DEF1P35732 RAD23YEL037C 1197 nt9.47□□□□□ -0.89
DEF1P35732 YLR111WYLR111W 333 nt9.47□□□□□ -0.89
DEF1P35732 SDH5YOL071W 489 nt9.47□□□□□ -0.89
DEF1P35732 ALD4YOR374W 1560 nt9.46□□□□□ -0.89
DEF1P35732 FIT3YOR383C 615 nt9.45□□□□□ -0.9
DEF1P35732 GGC1YDL198C 903 nt9.44□□□□□ -0.9
DEF1P35732 YGR012WYGR012W 1182 nt9.44□□□□□ -0.9
DEF1P35732 DIF1YLR437C 402 nt9.44□□□□□ -0.9
DEF1P35732 GND1YHR183W 1470 nt9.44□□□□□ -0.9
DEF1P35732 NBA1YOL070C 1506 nt9.44□□□□□ -0.9
DEF1P35732 ARO8YGL202W 1503 nt9.43□□□□□ -0.9
DEF1P35732 CTF3YLR381W 2202 nt9.43□□□□□ -0.9
DEF1P35732 UTR1YJR049C 1593 nt9.42□□□□□ -0.9
DEF1P35732 KES1YPL145C 1305 nt9.41□□□□□ -0.9
DEF1P35732 YLR279WYLR279W 390 nt9.41□□□□□ -0.9
DEF1P35732 ZRT3YKL175W 1512 nt9.41□□□□□ -0.9
DEF1P35732 YLR437C-AYLR437C-A 228 nt9.4□□□□□ -0.9
DEF1P35732 CAB5YDR196C 726 nt9.38□□□□□ -0.91
DEF1P35732 YAR028WYAR028W 705 nt9.38□□□□□ -0.91
DEF1P35732 MIM1YOL026C 342 nt9.38□□□□□ -0.91
DEF1P35732 ZAP1YJL056C 2643 nt9.37□□□□□ -0.91
DEF1P35732 RIB3YDR487C 627 nt9.37□□□□□ -0.91
DEF1P35732 AFG2YLR397C 2343 nt9.36□□□□□ -0.91
DEF1P35732 MSB4YOL112W 1479 nt9.35□□□□□ -0.91
DEF1P35732 YIL108WYIL108W 2091 nt9.34□□□□□ -0.91
DEF1P35732 YJL045WYJL045W 1905 nt9.34□□□□□ -0.91
DEF1P35732 ALP1YNL270C 1722 nt9.34□□□□□ -0.92
DEF1P35732 PRM5YIL117C 957 nt9.33□□□□□ -0.92
DEF1P35732 ODC1YPL134C 933 nt9.33□□□□□ -0.92
DEF1P35732 HXT10YFL011W 1641 nt9.33□□□□□ -0.92
DEF1P35732 SAM1YLR180W 1149 nt9.32□□□□□ -0.92
DEF1P35732 DUS3YLR401C 2007 nt9.32□□□□□ -0.92
DEF1P35732 MET1YKR069W 1782 nt9.32□□□□□ -0.92
DEF1P35732 YDR306CYDR306C 1437 nt9.31□□□□□ -0.92
DEF1P35732 SAM35YHR083W 990 nt9.31□□□□□ -0.92
DEF1P35732 OPI10YOL032W 741 nt9.31□□□□□ -0.92
DEF1P35732 ZTA1YBR046C 1005 nt9.3□□□□□ -0.92
DEF1P35732 HBS1YKR084C 1836 nt9.29□□□□□ -0.92
DEF1P35732 YJL067WYJL067W 351 nt9.29□□□□□ -0.92
DEF1P35732 YPL222C-AYPL222C-A 246 nt9.29□□□□□ -0.92
DEF1P35732 DBP1YPL119C 1854 nt9.28□□□□□ -0.92
DEF1P35732 AKR2YOR034C 2250 nt9.28□□□□□ -0.92
DEF1P35732 tD(GUC)BtD(GUC)B 72 nt9.28□□□□□ -0.92
DEF1P35732 tD(GUC)DtD(GUC)D 72 nt9.28□□□□□ -0.92
DEF1P35732 tD(GUC)G1tD(GUC)G1 72 nt9.28□□□□□ -0.92
DEF1P35732 tD(GUC)G2tD(GUC)G2 72 nt9.28□□□□□ -0.92
DEF1P35732 tD(GUC)I1tD(GUC)I1 72 nt9.28□□□□□ -0.92
DEF1P35732 tD(GUC)I2tD(GUC)I2 72 nt9.28□□□□□ -0.92
DEF1P35732 tD(GUC)J1tD(GUC)J1 72 nt9.28□□□□□ -0.92
DEF1P35732 tD(GUC)J2tD(GUC)J2 72 nt9.28□□□□□ -0.92
DEF1P35732 tD(GUC)J3tD(GUC)J3 72 nt9.28□□□□□ -0.92
DEF1P35732 tD(GUC)J4tD(GUC)J4 72 nt9.28□□□□□ -0.92
DEF1P35732 tD(GUC)KtD(GUC)K 72 nt9.28□□□□□ -0.92
DEF1P35732 tD(GUC)L1tD(GUC)L1 72 nt9.28□□□□□ -0.92
DEF1P35732 tD(GUC)L2tD(GUC)L2 72 nt9.28□□□□□ -0.92
DEF1P35732 tD(GUC)MtD(GUC)M 72 nt9.28□□□□□ -0.92
DEF1P35732 tD(GUC)OtD(GUC)O 72 nt9.28□□□□□ -0.92
DEF1P35732 YIL100C-AYIL100C-A 339 nt9.28□□□□□ -0.92
DEF1P35732 POP2YNR052C 1302 nt9.27□□□□□ -0.93
DEF1P35732 MSB3YNL293W 1902 nt9.25□□□□□ -0.93
DEF1P35732 TOP3YLR234W 1971 nt9.24□□□□□ -0.93
DEF1P35732 CMK2YOL016C 1344 nt9.24□□□□□ -0.93
DEF1P35732 SED1YDR077W 1017 nt9.23□□□□□ -0.93
Retrieved 100 of 7,029 protein–RNA pairs in 16.9 ms