Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 OSW5YMR148W 447 nt2.56□□□□□ -2
TY1B-HO13535 VPS16YPL045W 2397 nt2.56□□□□□ -2
TY1B-HO13535 VPS8YAL002W 3825 nt2.55□□□□□ -2
TY1B-HO13535 POL2YNL262W 6669 nt2.55□□□□□ -2
TY1B-HO13535 YML096WYML096W 1578 nt2.55□□□□□ -2
TY1B-HO13535 YOL079WYOL079W 399 nt2.55□□□□□ -2
TY1B-HO13535 YPR027CYPR027C 834 nt2.55□□□□□ -2
TY1B-HO13535 YGR130CYGR130C 2451 nt2.55□□□□□ -2
TY1B-HO13535 IKI1YHR187W 930 nt2.54□□□□□ -2
TY1B-HO13535 SEC65YML105C 822 nt2.54□□□□□ -2
TY1B-HO13535 PDR17YNL264C 1053 nt2.54□□□□□ -2
TY1B-HO13535 RGP1YDR137W 1992 nt2.54□□□□□ -2
TY1B-HO13535 RTP1YMR185W 2946 nt2.54□□□□□ -2
TY1B-HO13535 REV7YIL139C 738 nt2.54□□□□□ -2
TY1B-HO13535 MRPS17YMR188C 714 nt2.54□□□□□ -2
TY1B-HO13535 PZF1YPR186C 1290 nt2.54□□□□□ -2
TY1B-HO13535 YPR203WYPR203W 309 nt2.54□□□□□ -2
TY1B-HO13535 YDR239CYDR239C 2364 nt2.53□□□□□ -2
TY1B-HO13535 YML090WYML090W 387 nt2.53□□□□□ -2
TY1B-HO13535 LRE1YCL051W 1752 nt2.53□□□□□ -2
TY1B-HO13535 PRP3YDR473C 1410 nt2.53□□□□□ -2.01
TY1B-HO13535 PHO5YBR093C 1404 nt2.53□□□□□ -2.01
TY1B-HO13535 URC2YDR520C 2319 nt2.52□□□□□ -2.01
TY1B-HO13535 CWC22YGR278W 1734 nt2.52□□□□□ -2.01
TY1B-HO13535 CSI1YMR025W 888 nt2.52□□□□□ -2.01
TY1B-HO13535 UBP8YMR223W 1416 nt2.52□□□□□ -2.01
TY1B-HO13535 SMC1YFL008W 3678 nt2.52□□□□□ -2.01
TY1B-HO13535 FRQ1YDR373W 573 nt2.51□□□□□ -2.01
TY1B-HO13535 ARO7YPR060C 771 nt2.51□□□□□ -2.01
TY1B-HO13535 SEC16YPL085W 6588 nt2.51□□□□□ -2.01
TY1B-HO13535 SKT5YBL061C 2091 nt2.51□□□□□ -2.01
TY1B-HO13535 NET1YJL076W 3570 nt2.51□□□□□ -2.01
TY1B-HO13535 MOT1YPL082C 5604 nt2.51□□□□□ -2.01
TY1B-HO13535 FMP48YGR052W 1110 nt2.51□□□□□ -2.01
TY1B-HO13535 MRPL17YNL252C 846 nt2.51□□□□□ -2.01
TY1B-HO13535 CDC31YOR257W 486 nt2.51□□□□□ -2.01
TY1B-HO13535 APL2YKL135C 2181 nt2.51□□□□□ -2.01
TY1B-HO13535 IRC10YOL015W 1761 nt2.5□□□□□ -2.01
TY1B-HO13535 YER068C-AYER068C-A 432 nt2.5□□□□□ -2.01
TY1B-HO13535 CAP1YKL007W 807 nt2.5□□□□□ -2.01
TY1B-HO13535 TPS2YDR074W 2691 nt2.5□□□□□ -2.01
TY1B-HO13535 YOR365CYOR365C 2112 nt2.5□□□□□ -2.01
TY1B-HO13535 YFH1YDL120W 525 nt2.49□□□□□ -2.01
TY1B-HO13535 YGL193CYGL193C 312 nt2.49□□□□□ -2.01
TY1B-HO13535 RTT102YGR275W 474 nt2.49□□□□□ -2.01
TY1B-HO13535 PAI3YMR174C 207 nt2.49□□□□□ -2.01
TY1B-HO13535 MGA2YIR033W 3342 nt2.49□□□□□ -2.01
TY1B-HO13535 YDR203WYDR203W 318 nt2.49□□□□□ -2.01
TY1B-HO13535 CAB2YIL083C 1098 nt2.49□□□□□ -2.01
TY1B-HO13535 CYR1YJL005W 6081 nt2.48□□□□□ -2.01
TY1B-HO13535 CTR86YCR054C 1692 nt2.48□□□□□ -2.01
TY1B-HO13535 YJL028WYJL028W 336 nt2.48□□□□□ -2.01
TY1B-HO13535 NDL1YLR254C 570 nt2.48□□□□□ -2.01
TY1B-HO13535 CWC24YLR323C 780 nt2.48□□□□□ -2.01
TY1B-HO13535 REC114YMR133W 1287 nt2.48□□□□□ -2.01
TY1B-HO13535 YOR097CYOR097C 528 nt2.48□□□□□ -2.01
TY1B-HO13535 STP1YDR463W 1560 nt2.48□□□□□ -2.01
TY1B-HO13535 EPO1YMR124W 2832 nt2.47□□□□□ -2.01
TY1B-HO13535 TUS1YLR425W 3924 nt2.47□□□□□ -2.01
TY1B-HO13535 YDL118WYDL118W 381 nt2.47□□□□□ -2.01
TY1B-HO13535 REC102YLR329W 795 nt2.47□□□□□ -2.01
TY1B-HO13535 YTH1YPR107C 627 nt2.47□□□□□ -2.01
TY1B-HO13535 YBR089WYBR089W 600 nt2.47□□□□□ -2.01
TY1B-HO13535 MET6YER091C 2304 nt2.47□□□□□ -2.01
TY1B-HO13535 GEA1YJR031C 4227 nt2.47□□□□□ -2.01
TY1B-HO13535 PHO12YHR215W 1404 nt2.47□□□□□ -2.01
TY1B-HO13535 PHO11YAR071W 1404 nt2.47□□□□□ -2.01
TY1B-HO13535 YGR237CYGR237C 2358 nt2.46□□□□□ -2.01
TY1B-HO13535 YGR011WYGR011W 327 nt2.46□□□□□ -2.02
TY1B-HO13535 ACM1YPL267W 630 nt2.46□□□□□ -2.02
TY1B-HO13535 ARL1YBR164C 552 nt2.46□□□□□ -2.02
TY1B-HO13535 KDX1YKL161C 1302 nt2.46□□□□□ -2.02
TY1B-HO13535 IRA1YBR140C 9279 nt2.46□□□□□ -2.02
TY1B-HO13535 GLG2YJL137C 1143 nt2.46□□□□□ -2.02
TY1B-HO13535 MPP6YNR024W 561 nt2.46□□□□□ -2.02
TY1B-HO13535 SIL1YOL031C 1266 nt2.46□□□□□ -2.02
TY1B-HO13535 FES1YBR101C 873 nt2.46□□□□□ -2.02
TY1B-HO13535 YPR117WYPR117W 7470 nt2.46□□□□□ -2.02
TY1B-HO13535 SAD1YFR005C 1347 nt2.45□□□□□ -2.02
TY1B-HO13535 OKP1YGR179C 1221 nt2.45□□□□□ -2.02
TY1B-HO13535 PDP3YLR455W 915 nt2.45□□□□□ -2.02
TY1B-HO13535 AFT2YPL202C 1251 nt2.45□□□□□ -2.02
TY1B-HO13535 ARG2YJL071W 1725 nt2.45□□□□□ -2.02
TY1B-HO13535 ISW1YBR245C 3390 nt2.44□□□□□ -2.02
TY1B-HO13535 GGA1YDR358W 1674 nt2.44□□□□□ -2.02
TY1B-HO13535 REG1YDR028C 3045 nt2.44□□□□□ -2.02
TY1B-HO13535 ATP11YNL315C 957 nt2.44□□□□□ -2.02
TY1B-HO13535 TAF14YPL129W 735 nt2.44□□□□□ -2.02
TY1B-HO13535 NRG2YBR066C 663 nt2.44□□□□□ -2.02
TY1B-HO13535 STD1YOR047C 1335 nt2.44□□□□□ -2.02
TY1B-HO13535 ATP25YMR098C 1839 nt2.44□□□□□ -2.02
TY1B-HO13535 CBS2YDR197W 1170 nt2.44□□□□□ -2.02
TY1B-HO13535 YOR114WYOR114W 885 nt2.44□□□□□ -2.02
TY1B-HO13535 YBR134WYBR134W 402 nt2.44□□□□□ -2.02
TY1B-HO13535 YBR255C-AYBR255C-A 363 nt2.44□□□□□ -2.02
TY1B-HO13535 YPK1YKL126W 2043 nt2.43□□□□□ -2.02
TY1B-HO13535 MSM1YGR171C 1728 nt2.43□□□□□ -2.02
TY1B-HO13535 RPS0BYLR048W 759 nt2.43□□□□□ -2.02
TY1B-HO13535 PEX12YMR026C 1200 nt2.43□□□□□ -2.02
TY1B-HO13535 DUF1YOL087C 3351 nt2.43□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 49.9 ms