Protein–RNA interactions for Protein: P54787

VPS9, Vacuolar protein sorting-associated protein 9, yeastyeast

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS9P54787 HYM1YKL189W 1200 nt3.21□□□□□ -1.9
VPS9P54787 YBL055CYBL055C 1257 nt3.21□□□□□ -1.9
VPS9P54787 YIP3YNL044W 531 nt3.21□□□□□ -1.9
VPS9P54787 AVT5YBL089W 1380 nt3.21□□□□□ -1.9
VPS9P54787 DYN1YKR054C 12279 nt3.2□□□□□ -1.9
VPS9P54787 YER165C-AYER165C-A 357 nt3.2□□□□□ -1.9
VPS9P54787 YJL175WYJL175W 513 nt3.2□□□□□ -1.9
VPS9P54787 YKL131WYKL131W 522 nt3.2□□□□□ -1.9
VPS9P54787 MMS1YPR164W 4224 nt3.2□□□□□ -1.9
VPS9P54787 SAD1YFR005C 1347 nt3.19□□□□□ -1.9
VPS9P54787 POL4YCR014C 1749 nt3.19□□□□□ -1.9
VPS9P54787 TIF4631YGR162W 2859 nt3.19□□□□□ -1.9
VPS9P54787 HFM1YGL251C 3564 nt3.19□□□□□ -1.9
VPS9P54787 NET1YJL076W 3570 nt3.19□□□□□ -1.9
VPS9P54787 YAK1YJL141C 2424 nt3.19□□□□□ -1.9
VPS9P54787 CWH41YGL027C 2502 nt3.19□□□□□ -1.9
VPS9P54787 YDR491CYDR491C 492 nt3.19□□□□□ -1.9
VPS9P54787 YHR180WYHR180W 492 nt3.19□□□□□ -1.9
VPS9P54787 MRPS8YMR158W 468 nt3.19□□□□□ -1.9
VPS9P54787 YNL276CYNL276C 396 nt3.19□□□□□ -1.9
VPS9P54787 TAF3YPL011C 1062 nt3.19□□□□□ -1.9
VPS9P54787 POL3YDL102W 3294 nt3.19□□□□□ -1.9
VPS9P54787 ART10YLR392C 1557 nt3.18□□□□□ -1.9
VPS9P54787 SNQ2YDR011W 4506 nt3.18□□□□□ -1.9
VPS9P54787 snR68snR68 136 nt3.18□□□□□ -1.9
VPS9P54787 YEL010WYEL010W 351 nt3.18□□□□□ -1.9
VPS9P54787 YFH7YFR007W 1062 nt3.18□□□□□ -1.9
VPS9P54787 USE1YGL098W 738 nt3.18□□□□□ -1.9
VPS9P54787 YGL117WYGL117W 798 nt3.18□□□□□ -1.9
VPS9P54787 YGR160WYGR160W 612 nt3.18□□□□□ -1.9
VPS9P54787 YGR270C-AYGR270C-A 219 nt3.18□□□□□ -1.9
VPS9P54787 YHR214C-EYHR214C-E 300 nt3.18□□□□□ -1.9
VPS9P54787 YJR056CYJR056C 711 nt3.18□□□□□ -1.9
VPS9P54787 MRPL38YKL170W 417 nt3.18□□□□□ -1.9
VPS9P54787 RPL17AYKL180W 555 nt3.18□□□□□ -1.9
VPS9P54787 YAR070CYAR070C 300 nt3.18□□□□□ -1.9
VPS9P54787 PRM6YML047C 1059 nt3.18□□□□□ -1.9
VPS9P54787 MRPL17YNL252C 846 nt3.18□□□□□ -1.9
VPS9P54787 YOL038C-AYOL038C-A 96 nt3.18□□□□□ -1.9
VPS9P54787 TPT1YOL102C 693 nt3.18□□□□□ -1.9
VPS9P54787 GCY1YOR120W 939 nt3.18□□□□□ -1.9
VPS9P54787 YPL135C-AYPL135C-A 174 nt3.18□□□□□ -1.9
VPS9P54787 TOM1YDR457W 9807 nt3.18□□□□□ -1.9
VPS9P54787 21S_rRNA21S_rRNA 3296 nt3.18□□□□□ -1.9
VPS9P54787 RPA190YOR341W 4995 nt3.18□□□□□ -1.9
VPS9P54787 PFK26YIL107C 2484 nt3.17□□□□□ -1.9
VPS9P54787 TGL3YMR313C 1929 nt3.17□□□□□ -1.9
VPS9P54787 PEX6YNL329C 3093 nt3.17□□□□□ -1.9
VPS9P54787 YOR296WYOR296W 3870 nt3.17□□□□□ -1.9
VPS9P54787 PEX5YDR244W 1839 nt3.17□□□□□ -1.9
VPS9P54787 MED1YPR070W 1701 nt3.17□□□□□ -1.9
VPS9P54787 PDC2YDR081C 2778 nt3.17□□□□□ -1.9
VPS9P54787 MRPL32YCR003W 552 nt3.17□□□□□ -1.9
VPS9P54787 DPP1YDR284C 870 nt3.17□□□□□ -1.9
VPS9P54787 SEC4YFL005W 648 nt3.17□□□□□ -1.9
VPS9P54787 YGR111WYGR111W 1203 nt3.17□□□□□ -1.9
VPS9P54787 tQ(UUG)BtQ(UUG)B 72 nt3.17□□□□□ -1.9
VPS9P54787 RPL6BYLR448W 531 nt3.17□□□□□ -1.9
VPS9P54787 TRI1YMR233W 681 nt3.17□□□□□ -1.9
VPS9P54787 DIA1YMR316W 1011 nt3.17□□□□□ -1.9
VPS9P54787 snR35snR35 204 nt3.17□□□□□ -1.9
VPS9P54787 YDR034C-DYDR034C-D 5313 nt3.17□□□□□ -1.9
VPS9P54787 VAC14YLR386W 2643 nt3.17□□□□□ -1.9
VPS9P54787 RIX1YHR197W 2292 nt3.17□□□□□ -1.9
VPS9P54787 SKO1YNL167C 1944 nt3.17□□□□□ -1.9
VPS9P54787 BMS1YPL217C 3552 nt3.16□□□□□ -1.9
VPS9P54787 DRS2YAL026C 4068 nt3.16□□□□□ -1.9
VPS9P54787 MDM1YML104C 3384 nt3.16□□□□□ -1.9
VPS9P54787 YMR018WYMR018W 1545 nt3.16□□□□□ -1.9
VPS9P54787 RPL13AYDL082W 600 nt3.16□□□□□ -1.9
VPS9P54787 YDR193WYDR193W 399 nt3.16□□□□□ -1.9
VPS9P54787 HLR1YDR528W 1272 nt3.16□□□□□ -1.9
VPS9P54787 PEX14YGL153W 1026 nt3.16□□□□□ -1.9
VPS9P54787 MRPL9YGR220C 810 nt3.16□□□□□ -1.9
VPS9P54787 YKL065W-AYKL065W-A 222 nt3.16□□□□□ -1.9
VPS9P54787 PDR17YNL264C 1053 nt3.16□□□□□ -1.9
VPS9P54787 TYE7YOR344C 876 nt3.16□□□□□ -1.9
VPS9P54787 AIM4YBR194W 372 nt3.16□□□□□ -1.9
VPS9P54787 PAM1YDR251W 2493 nt3.16□□□□□ -1.9
VPS9P54787 TRM82YDR165W 1335 nt3.16□□□□□ -1.9
VPS9P54787 FRE8YLR047C 2061 nt3.15□□□□□ -1.9
VPS9P54787 BUD4YJR092W 4344 nt3.15□□□□□ -1.9
VPS9P54787 SEC7YDR170C 6030 nt3.15□□□□□ -1.91
VPS9P54787 YER039C-AYER039C-A 219 nt3.15□□□□□ -1.91
VPS9P54787 ECO1YFR027W 846 nt3.15□□□□□ -1.91
VPS9P54787 DOG2YHR043C 741 nt3.15□□□□□ -1.91
VPS9P54787 YLR347W-AYLR347W-A 141 nt3.15□□□□□ -1.91
VPS9P54787 YMR294W-AYMR294W-A 360 nt3.15□□□□□ -1.91
VPS9P54787 YNL043CYNL043C 321 nt3.15□□□□□ -1.91
VPS9P54787 YDR170W-AYDR170W-A 1323 nt3.15□□□□□ -1.91
VPS9P54787 YBL005W-AYBL005W-A 1323 nt3.15□□□□□ -1.91
VPS9P54787 YMR046CYMR046C 1323 nt3.15□□□□□ -1.91
VPS9P54787 YNL284C-AYNL284C-A 1323 nt3.15□□□□□ -1.91
VPS9P54787 CHS2YBR038W 2892 nt3.14□□□□□ -1.91
VPS9P54787 FMN1YDR236C 657 nt3.14□□□□□ -1.91
VPS9P54787 RPL22BYFL034C-A 369 nt3.14□□□□□ -1.91
VPS9P54787 CUP1-1YHR053C 186 nt3.14□□□□□ -1.91
VPS9P54787 CUP1-2YHR055C 186 nt3.14□□□□□ -1.91
VPS9P54787 ERG20YJL167W 1059 nt3.14□□□□□ -1.91
VPS9P54787 LSM8YJR022W 330 nt3.14□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 41.6 ms