Protein–RNA interactions for Protein: P23643

VPS3, Vacuolar protein sorting-associated protein 3, yeastyeast

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS3P23643 YHR214C-DYHR214C-D 294 nt2.86□□□□□ -1.95
VPS3P23643 YAR069CYAR069C 294 nt2.86□□□□□ -1.95
VPS3P23643 DUN1YDL101C 1542 nt2.86□□□□□ -1.95
VPS3P23643 GEA1YJR031C 4227 nt2.86□□□□□ -1.95
VPS3P23643 BNI4YNL233W 2679 nt2.86□□□□□ -1.95
VPS3P23643 YCR015CYCR015C 954 nt2.85□□□□□ -1.95
VPS3P23643 PNC1YGL037C 651 nt2.85□□□□□ -1.95
VPS3P23643 SAY1YGR263C 1275 nt2.85□□□□□ -1.95
VPS3P23643 EPT1YHR123W 1176 nt2.85□□□□□ -1.95
VPS3P23643 YLR297WYLR297W 390 nt2.85□□□□□ -1.95
VPS3P23643 AFT2YPL202C 1251 nt2.85□□□□□ -1.95
VPS3P23643 PIN3YPR154W 648 nt2.85□□□□□ -1.95
VPS3P23643 FKS3YMR306W 5358 nt2.85□□□□□ -1.95
VPS3P23643 MET6YER091C 2304 nt2.85□□□□□ -1.95
VPS3P23643 YML096WYML096W 1578 nt2.84□□□□□ -1.95
VPS3P23643 YCK2YNL154C 1641 nt2.84□□□□□ -1.95
VPS3P23643 IZH1YDR492W 951 nt2.84□□□□□ -1.95
VPS3P23643 YIL156W-AYIL156W-A 402 nt2.84□□□□□ -1.95
VPS3P23643 CWC22YGR278W 1734 nt2.84□□□□□ -1.96
VPS3P23643 YKL100CYKL100C 1764 nt2.84□□□□□ -1.96
VPS3P23643 CDC20YGL116W 1833 nt2.84□□□□□ -1.96
VPS3P23643 YPL150WYPL150W 2706 nt2.84□□□□□ -1.96
VPS3P23643 MON1YGL124C 1935 nt2.83□□□□□ -1.96
VPS3P23643 KIN82YCR091W 2163 nt2.83□□□□□ -1.96
VPS3P23643 RAD55YDR076W 1221 nt2.83□□□□□ -1.96
VPS3P23643 DDI2YFL061W 678 nt2.83□□□□□ -1.96
VPS3P23643 ADH4YGL256W 1149 nt2.83□□□□□ -1.96
VPS3P23643 SAW1YAL027W 786 nt2.83□□□□□ -1.96
VPS3P23643 YNL203CYNL203C 612 nt2.83□□□□□ -1.96
VPS3P23643 YNR062CYNR062C 984 nt2.83□□□□□ -1.96
VPS3P23643 INO4YOL108C 456 nt2.83□□□□□ -1.96
VPS3P23643 YOR385WYOR385W 873 nt2.83□□□□□ -1.96
VPS3P23643 PPT2YPL148C 522 nt2.83□□□□□ -1.96
VPS3P23643 VHR2YER064C 1518 nt2.83□□□□□ -1.96
VPS3P23643 PFF1YBR074W 2931 nt2.82□□□□□ -1.96
VPS3P23643 RIM1YCR028C-A 408 nt2.82□□□□□ -1.96
VPS3P23643 YHL045WYHL045W 348 nt2.82□□□□□ -1.96
VPS3P23643 DID4YKL002W 699 nt2.82□□□□□ -1.96
VPS3P23643 YOL024WYOL024W 519 nt2.82□□□□□ -1.96
VPS3P23643 YPL035CYPL035C 348 nt2.82□□□□□ -1.96
VPS3P23643 SGS1YMR190C 4344 nt2.82□□□□□ -1.96
VPS3P23643 CDC55YGL190C 1581 nt2.82□□□□□ -1.96
VPS3P23643 DSS1YMR287C 2910 nt2.82□□□□□ -1.96
VPS3P23643 SLP1YOR154W 1764 nt2.82□□□□□ -1.96
VPS3P23643 SAP1YER047C 2694 nt2.81□□□□□ -1.96
VPS3P23643 21S_rRNA21S_rRNA 3296 nt2.81□□□□□ -1.96
VPS3P23643 YDL241WYDL241W 372 nt2.81□□□□□ -1.96
VPS3P23643 YGR073CYGR073C 372 nt2.81□□□□□ -1.96
VPS3P23643 MPC3YGR243W 441 nt2.81□□□□□ -1.96
VPS3P23643 YIL054WYIL054W 318 nt2.81□□□□□ -1.96
VPS3P23643 MRPL38YKL170W 417 nt2.81□□□□□ -1.96
VPS3P23643 DAD2YKR083C 402 nt2.81□□□□□ -1.96
VPS3P23643 YBL028CYBL028C 321 nt2.81□□□□□ -1.96
VPS3P23643 GPI2YPL076W 843 nt2.81□□□□□ -1.96
VPS3P23643 POS5YPL188W 1245 nt2.81□□□□□ -1.96
VPS3P23643 EAP1YKL204W 1899 nt2.81□□□□□ -1.96
VPS3P23643 MSB2YGR014W 3921 nt2.81□□□□□ -1.96
VPS3P23643 RED1YLR263W 2484 nt2.8□□□□□ -1.96
VPS3P23643 YDL050CYDL050C 372 nt2.8□□□□□ -1.96
VPS3P23643 YDR209CYDR209C 414 nt2.8□□□□□ -1.96
VPS3P23643 YDR290WYDR290W 330 nt2.8□□□□□ -1.96
VPS3P23643 RRT13YER066W 558 nt2.8□□□□□ -1.96
VPS3P23643 RPB9YGL070C 369 nt2.8□□□□□ -1.96
VPS3P23643 POP6YGR030C 477 nt2.8□□□□□ -1.96
VPS3P23643 MRPL6YHR147C 645 nt2.8□□□□□ -1.96
VPS3P23643 RPL17BYJL177W 555 nt2.8□□□□□ -1.96
VPS3P23643 JIP3YLR331C 378 nt2.8□□□□□ -1.96
VPS3P23643 YNL162W-AYNL162W-A 219 nt2.8□□□□□ -1.96
VPS3P23643 RPL36BYPL249C-A 303 nt2.8□□□□□ -1.96
VPS3P23643 APD1YBR151W 951 nt2.8□□□□□ -1.96
VPS3P23643 snR43snR43 209 nt2.8□□□□□ -1.96
VPS3P23643 PDR3YBL005W 2931 nt2.8□□□□□ -1.96
VPS3P23643 CET1YPL228W 1650 nt2.79□□□□□ -1.96
VPS3P23643 CLN2YPL256C 1638 nt2.79□□□□□ -1.96
VPS3P23643 NFT1YKR103W 3657 nt2.79□□□□□ -1.96
VPS3P23643 CAF120YNL278W 3183 nt2.79□□□□□ -1.96
VPS3P23643 RDS2YPL133C 1341 nt2.79□□□□□ -1.96
VPS3P23643 RMD5YDR255C 1266 nt2.79□□□□□ -1.96
VPS3P23643 YGL118CYGL118C 438 nt2.79□□□□□ -1.96
VPS3P23643 TAN1YGL232W 870 nt2.79□□□□□ -1.96
VPS3P23643 YLR290CYLR290C 834 nt2.79□□□□□ -1.96
VPS3P23643 YLR311CYLR311C 348 nt2.79□□□□□ -1.96
VPS3P23643 YLR363W-AYLR363W-A 258 nt2.79□□□□□ -1.96
VPS3P23643 YNL043CYNL043C 321 nt2.79□□□□□ -1.96
VPS3P23643 RPL23AYBL087C 414 nt2.79□□□□□ -1.96
VPS3P23643 MUM2YBR057C 1101 nt2.79□□□□□ -1.96
VPS3P23643 GRX1YCL035C 333 nt2.79□□□□□ -1.96
VPS3P23643 YDR034C-DYDR034C-D 5313 nt2.79□□□□□ -1.96
VPS3P23643 NEW1YPL226W 3591 nt2.78□□□□□ -1.96
VPS3P23643 RRP42YDL111C 798 nt2.78□□□□□ -1.96
VPS3P23643 YDR222WYDR222W 1248 nt2.78□□□□□ -1.96
VPS3P23643 PRP18YGR006W 756 nt2.78□□□□□ -1.96
VPS3P23643 RPL27AYHR010W 411 nt2.78□□□□□ -1.96
VPS3P23643 RNR2YJL026W 1200 nt2.78□□□□□ -1.96
VPS3P23643 VMA6YLR447C 1038 nt2.78□□□□□ -1.96
VPS3P23643 MRPL33YMR286W 261 nt2.78□□□□□ -1.96
VPS3P23643 TRM112YNR046W 408 nt2.78□□□□□ -1.96
VPS3P23643 YOR020W-AYOR020W-A 273 nt2.78□□□□□ -1.96
VPS3P23643 SWD3YBR175W 948 nt2.78□□□□□ -1.96
VPS3P23643 MRPL27YBR282W 441 nt2.78□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 11.8 ms