Protein–RNA interactions for Protein: P23246

SFPQ, Splicing factor, proline- and glutamine-rich, humanhuman

Known RBP eCLIP

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQP23246 FAM169A-204ENST00000510609 5908 ntTSL 1 (best)15.56■□□□□ 0.089e-16■□□□□ 9
SFPQP23246 FAM169A-202ENST00000506954 571 ntTSL 410.35□□□□□ -0.759e-16■□□□□ 9
SFPQP23246 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.059e-9■□□□□ 9
SFPQP23246 ACAP3-208ENST00000472541 1946 ntTSL 521.1■□□□□ 0.979e-9■□□□□ 9
SFPQP23246 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.479e-9■□□□□ 9
SFPQP23246 ACAP3-211ENST00000479108 485 ntTSL 317.17■□□□□ 0.349e-9■□□□□ 9
SFPQP23246 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.199e-9■□□□□ 9
SFPQP23246 ACAP3-203ENST00000354980 582 ntTSL 515.39■□□□□ 0.059e-9■□□□□ 9
SFPQP23246 LCOR-209ENST00000540664 2213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.689e-9■□□□□ 9
SFPQP23246 ACAP3-205ENST00000438966 265 ntTSL 38.26□□□□□ -1.099e-9■□□□□ 9
SFPQP23246 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.639e-9■□□□□ 9
SFPQP23246 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.23□□□□□ -1.899e-9■□□□□ 9
SFPQP23246 ZNF638-226ENST00000494621 871 ntTSL 320.3■□□□□ 0.843e-7■□□□□ 9
SFPQP23246 ZNF638-206ENST00000437658 931 ntTSL 218.7■□□□□ 0.583e-7■□□□□ 9
SFPQP23246 ZNF638-213ENST00000466330 746 ntTSL 316.75■□□□□ 0.273e-7■□□□□ 9
SFPQP23246 ZNF638-212ENST00000464375 626 ntTSL 316.12■□□□□ 0.173e-7■□□□□ 9
SFPQP23246 ZNF638-216ENST00000475743 590 ntTSL 416■□□□□ 0.153e-7■□□□□ 9
SFPQP23246 ZNF638-214ENST00000466975 560 ntTSL 414.96□□□□□ -0.013e-7■□□□□ 9
SFPQP23246 ZNF638-205ENST00000417778 760 ntTSL 314.55□□□□□ -0.083e-7■□□□□ 9
SFPQP23246 ZNF638-209ENST00000455226 585 ntTSL 413.15□□□□□ -0.33e-7■□□□□ 9
SFPQP23246 ZNF638-207ENST00000454122 731 ntTSL 312.72□□□□□ -0.373e-7■□□□□ 9
SFPQP23246 ZNF638-208ENST00000454278 595 ntTSL 412.51□□□□□ -0.413e-7■□□□□ 9
SFPQP23246 ZNF638-220ENST00000487707 592 ntTSL 311.71□□□□□ -0.533e-7■□□□□ 9
SFPQP23246 TRIO-223ENST00000515710 1913 ntTSL 322.25■■□□□ 1.152e-6■□□□□ 9
SFPQP23246 AK4-206ENST00000497030 834 ntTSL 1 (best)29.15■■■□□ 2.268e-6■□□□□ 9
SFPQP23246 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC29.15■■■□□ 2.268e-6■□□□□ 9
SFPQP23246 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.168e-6■□□□□ 9
SFPQP23246 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC28.19■■■□□ 2.18e-6■□□□□ 9
SFPQP23246 RHEB-205ENST00000478470 1153 ntTSL 528.02■■■□□ 2.088e-6■□□□□ 9
SFPQP23246 AK4-203ENST00000470888 1043 ntTSL 226.62■■□□□ 1.858e-6■□□□□ 9
SFPQP23246 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC26.11■■□□□ 1.778e-6■□□□□ 9
SFPQP23246 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.94■■□□□ 1.748e-6■□□□□ 9
SFPQP23246 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC25.7■■□□□ 1.718e-6■□□□□ 9
SFPQP23246 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.588e-6■□□□□ 9
SFPQP23246 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.518e-6■□□□□ 9
SFPQP23246 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC24.27■■□□□ 1.488e-6■□□□□ 9
SFPQP23246 FNIP1-206ENST00000623690 1373 nt23.97■■□□□ 1.432e-7■□□□□ 9
SFPQP23246 WDR4-207ENST00000492742 2205 ntTSL 222.93■■□□□ 1.262e-12■□□□□ 9
SFPQP23246 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.262e-12■□□□□ 9
SFPQP23246 RHEB-204ENST00000472642 900 ntTSL 3 BASIC22.75■■□□□ 1.238e-6■□□□□ 9
SFPQP23246 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC22.62■■□□□ 1.218e-6■□□□□ 9
SFPQP23246 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.218e-6■□□□□ 9
SFPQP23246 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC22.11■■□□□ 1.132e-7■□□□□ 9
SFPQP23246 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.88e-6■□□□□ 9
SFPQP23246 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.758e-6■□□□□ 9
SFPQP23246 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.678e-6■□□□□ 9
SFPQP23246 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.38■□□□□ 0.538e-6■□□□□ 9
SFPQP23246 CTDSPL-204ENST00000435525 371 ntTSL 318.26■□□□□ 0.518e-6■□□□□ 9
SFPQP23246 SND1-203ENST00000463020 793 ntTSL 217.62■□□□□ 0.418e-6■□□□□ 9
SFPQP23246 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.388e-6■□□□□ 9
SFPQP23246 WDR4-205ENST00000476326 1977 ntTSL 1 (best)17.09■□□□□ 0.332e-12■□□□□ 9
SFPQP23246 AK4-204ENST00000474968 928 ntTSL 216.31■□□□□ 0.28e-6■□□□□ 9
SFPQP23246 RHEB-207ENST00000496004 744 ntTSL 2 BASIC15.87■□□□□ 0.138e-6■□□□□ 9
SFPQP23246 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.028e-6■□□□□ 9
SFPQP23246 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC15□□□□□ -0.012e-7■□□□□ 9
SFPQP23246 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.028e-6■□□□□ 9
SFPQP23246 ABL2-202ENST00000367623 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.118e-6■□□□□ 9
SFPQP23246 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.238e-6■□□□□ 9
SFPQP23246 AK4-201ENST00000327299 6836 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.258e-6■□□□□ 9
SFPQP23246 FNIP1-203ENST00000510461 3845 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.532e-7■□□□□ 9
SFPQP23246 HDLBP-219ENST00000442714 569 ntTSL 411.39□□□□□ -0.598e-6■□□□□ 9
SFPQP23246 YAP1-203ENST00000524575 1638 ntTSL 2 BASIC10.02□□□□□ -0.818e-6■□□□□ 9
SFPQP23246 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.868e-6■□□□□ 9
SFPQP23246 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.62□□□□□ -1.352e-7■□□□□ 9
SFPQP23246 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.35□□□□□ -1.392e-7■□□□□ 9
SFPQP23246 NPSR1-AS1-201ENST00000358772 550 ntTSL 1 (best)6.35□□□□□ -1.392e-7■□□□□ 9
SFPQP23246 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.42e-7■□□□□ 9
SFPQP23246 NPSR1-AS1-207ENST00000539747 830 ntTSL 26.23□□□□□ -1.412e-7■□□□□ 9
SFPQP23246 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.11□□□□□ -1.432e-7■□□□□ 9
SFPQP23246 AC096947.1-201ENST00000603233 470 ntBASIC6.08□□□□□ -1.448e-6■□□□□ 9
SFPQP23246 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.462e-7■□□□□ 9
SFPQP23246 NPSR1-AS1-203ENST00000428922 510 ntTSL 1 (best)5.81□□□□□ -1.482e-7■□□□□ 9
SFPQP23246 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.74□□□□□ -1.498e-6■□□□□ 9
SFPQP23246 RHEB-203ENST00000470370 501 ntTSL 55.24□□□□□ -1.578e-6■□□□□ 9
SFPQP23246 NPSR1-AS1-204ENST00000431669 369 ntTSL 1 (best)4.53□□□□□ -1.682e-7■□□□□ 9
SFPQP23246 RPS29P7-201ENST00000439662 171 ntBASIC4.46□□□□□ -1.78e-6■□□□□ 9
SFPQP23246 RALGAPA1-206ENST00000554259 3354 ntTSL 52.71□□□□□ -1.982e-7■□□□□ 9
SFPQP23246 ST3GAL6-206ENST00000466482 540 ntTSL 424.91■■□□□ 1.582e-7■□□□□ 8.9
SFPQP23246 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.77■■□□□ 1.42e-7■□□□□ 8.9
SFPQP23246 ACSL4-206ENST00000502391 802 ntTSL 323.07■■□□□ 1.282e-7■□□□□ 8.9
SFPQP23246 ST3GAL6-227ENST00000497621 2109 ntTSL 1 (best)22.15■■□□□ 1.142e-7■□□□□ 8.9
SFPQP23246 ST3GAL6-226ENST00000497008 564 ntTSL 421.73■■□□□ 1.072e-7■□□□□ 8.9
SFPQP23246 ST3GAL6-204ENST00000462152 1102 ntTSL 221.69■■□□□ 1.062e-7■□□□□ 8.9
SFPQP23246 ST3GAL6-203ENST00000460774 582 ntTSL 321.64■■□□□ 1.052e-7■□□□□ 8.9
SFPQP23246 ACSL4-211ENST00000508092 637 ntTSL 420.78■□□□□ 0.922e-7■□□□□ 8.9
SFPQP23246 ST3GAL6-213ENST00000480133 360 ntTSL 420.12■□□□□ 0.812e-7■□□□□ 8.9
SFPQP23246 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.91■□□□□ 0.782e-7■□□□□ 8.9
SFPQP23246 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.79■□□□□ 0.762e-7■□□□□ 8.9
SFPQP23246 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.742e-7■□□□□ 8.9
SFPQP23246 ST3GAL6-219ENST00000489112 804 ntTSL 319.47■□□□□ 0.712e-7■□□□□ 8.9
SFPQP23246 ACSL4-208ENST00000504980 573 ntTSL 418.96■□□□□ 0.632e-7■□□□□ 8.9
SFPQP23246 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.052e-7■□□□□ 8.9
SFPQP23246 ST3GAL6-208ENST00000469105 2837 ntTSL 1 (best)14.75□□□□□ -0.052e-7■□□□□ 8.9
SFPQP23246 ST3GAL6-202ENST00000394162 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.12e-7■□□□□ 8.9
SFPQP23246 ST3GAL6-228ENST00000613264 3399 ntTSL 1 (best) BASIC14.27□□□□□ -0.122e-7■□□□□ 8.9
SFPQP23246 ST3GAL6-217ENST00000486249 3148 ntTSL 214.17□□□□□ -0.142e-7■□□□□ 8.9
SFPQP23246 ST3GAL6-201ENST00000265261 3362 ntTSL 2 BASIC12.17□□□□□ -0.462e-7■□□□□ 8.9
SFPQP23246 ACSL4-205ENST00000469857 506 ntTSL 1 (best)12.15□□□□□ -0.462e-7■□□□□ 8.9
SFPQP23246 ZNF217-202ENST00000371471 5796 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.642e-7■□□□□ 8.9
SFPQP23246 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC8.41□□□□□ -1.062e-7■□□□□ 8.9
Retrieved 100 of 4,991 protein–RNA pairs in 142.5 ms