Protein–RNA interactions for Protein: P38428

CUE1, Coupling of ubiquitin conjugation to ER degradation protein 1, yeastyeast

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUE1P38428 DDI2YFL061W 678 nt2.62□□□□□ -1.99
CUE1P38428 RPL20AYMR242C 519 nt2.62□□□□□ -1.99
CUE1P38428 YMR294W-AYMR294W-A 360 nt2.62□□□□□ -1.99
CUE1P38428 DDI3YNL335W 678 nt2.62□□□□□ -1.99
CUE1P38428 YPR074W-AYPR074W-A 171 nt2.62□□□□□ -1.99
CUE1P38428 MED1YPR070W 1701 nt2.62□□□□□ -1.99
CUE1P38428 NUF2YOL069W 1356 nt2.61□□□□□ -1.99
CUE1P38428 NDT80YHR124W 1884 nt2.61□□□□□ -1.99
CUE1P38428 NHP10YDL002C 612 nt2.61□□□□□ -1.99
CUE1P38428 TSC13YDL015C 933 nt2.61□□□□□ -1.99
CUE1P38428 tC(GCA)BtC(GCA)B 72 nt2.61□□□□□ -1.99
CUE1P38428 tC(GCA)GtC(GCA)G 72 nt2.61□□□□□ -1.99
CUE1P38428 tC(GCA)P1tC(GCA)P1 72 nt2.61□□□□□ -1.99
CUE1P38428 tC(GCA)P2tC(GCA)P2 72 nt2.61□□□□□ -1.99
CUE1P38428 YLR076CYLR076C 423 nt2.61□□□□□ -1.99
CUE1P38428 AHP1YLR109W 531 nt2.61□□□□□ -1.99
CUE1P38428 YLR311CYLR311C 348 nt2.61□□□□□ -1.99
CUE1P38428 YML047W-AYML047W-A 366 nt2.61□□□□□ -1.99
CUE1P38428 YNL162W-AYNL162W-A 219 nt2.61□□□□□ -1.99
CUE1P38428 GPI2YPL076W 843 nt2.61□□□□□ -1.99
CUE1P38428 RAX2YLR084C 3663 nt2.61□□□□□ -1.99
CUE1P38428 GYL1YMR192W 2163 nt2.61□□□□□ -1.99
CUE1P38428 ECM18YDR125C 1362 nt2.61□□□□□ -1.99
CUE1P38428 BNA4YBL098W 1383 nt2.61□□□□□ -1.99
CUE1P38428 TAF2YCR042C 4224 nt2.6□□□□□ -1.99
CUE1P38428 BNI4YNL233W 2679 nt2.6□□□□□ -1.99
CUE1P38428 YDL050CYDL050C 372 nt2.6□□□□□ -1.99
CUE1P38428 YDR290WYDR290W 330 nt2.6□□□□□ -1.99
CUE1P38428 YEL075CYEL075C 369 nt2.6□□□□□ -1.99
CUE1P38428 ISC10YER180C 804 nt2.6□□□□□ -1.99
CUE1P38428 RPB9YGL070C 369 nt2.6□□□□□ -1.99
CUE1P38428 ADH4YGL256W 1149 nt2.6□□□□□ -1.99
CUE1P38428 SAY1YGR263C 1275 nt2.6□□□□□ -1.99
CUE1P38428 QCR10YHR001W-A 234 nt2.6□□□□□ -1.99
CUE1P38428 YJR128WYJR128W 360 nt2.6□□□□□ -1.99
CUE1P38428 USB1YLR132C 873 nt2.6□□□□□ -1.99
CUE1P38428 NDL1YLR254C 570 nt2.6□□□□□ -1.99
CUE1P38428 GRX1YCL035C 333 nt2.6□□□□□ -1.99
CUE1P38428 DBP10YDL031W 2988 nt2.6□□□□□ -1.99
CUE1P38428 HFM1YGL251C 3564 nt2.6□□□□□ -1.99
CUE1P38428 VPS30YPL120W 1674 nt2.6□□□□□ -1.99
CUE1P38428 DNM1YLL001W 2274 nt2.59□□□□□ -1.99
CUE1P38428 UBP14YBR058C 2346 nt2.59□□□□□ -1.99
CUE1P38428 PKP2YGL059W 1476 nt2.59□□□□□ -1.99
CUE1P38428 STE6YKL209C 3873 nt2.59□□□□□ -1.99
CUE1P38428 DTD1YDL219W 453 nt2.59□□□□□ -1.99
CUE1P38428 NSA2YER126C 786 nt2.59□□□□□ -1.99
CUE1P38428 CDC26YFR036W 375 nt2.59□□□□□ -1.99
CUE1P38428 YGR114CYGR114C 390 nt2.59□□□□□ -1.99
CUE1P38428 COX23YHR116W 456 nt2.59□□□□□ -1.99
CUE1P38428 YIL175WYIL175W 318 nt2.59□□□□□ -1.99
CUE1P38428 YJL222W-BYJL222W-B 138 nt2.59□□□□□ -1.99
CUE1P38428 DID4YKL002W 699 nt2.59□□□□□ -1.99
CUE1P38428 REC102YLR329W 795 nt2.59□□□□□ -1.99
CUE1P38428 YLR363W-AYLR363W-A 258 nt2.59□□□□□ -1.99
CUE1P38428 BLS1YLR408C 369 nt2.59□□□□□ -1.99
CUE1P38428 YBL081WYBL081W 1107 nt2.59□□□□□ -1.99
CUE1P38428 VPS9YML097C 1356 nt2.59□□□□□ -2
CUE1P38428 NET1YJL076W 3570 nt2.59□□□□□ -2
CUE1P38428 ITC1YGL133W 3795 nt2.58□□□□□ -2
CUE1P38428 YDL032WYDL032W 312 nt2.58□□□□□ -2
CUE1P38428 RPL35BYDL136W 363 nt2.58□□□□□ -2
CUE1P38428 MUM2YBR057C 1101 nt2.58□□□□□ -2
CUE1P38428 POL30YBR088C 777 nt2.58□□□□□ -2
CUE1P38428 MET10YFR030W 3108 nt2.58□□□□□ -2
CUE1P38428 SRP68YPL243W 1800 nt2.58□□□□□ -2
CUE1P38428 YJR061WYJR061W 2808 nt2.58□□□□□ -2
CUE1P38428 SPH1YLR313C 1593 nt2.57□□□□□ -2
CUE1P38428 DSF2YBR007C 2211 nt2.57□□□□□ -2
CUE1P38428 RED1YLR263W 2484 nt2.57□□□□□ -2
CUE1P38428 YDR222WYDR222W 1248 nt2.57□□□□□ -2
CUE1P38428 ARI1YGL157W 1044 nt2.57□□□□□ -2
CUE1P38428 BRR6YGL247W 594 nt2.57□□□□□ -2
CUE1P38428 tQ(UUG)BtQ(UUG)B 72 nt2.57□□□□□ -2
CUE1P38428 YHR180WYHR180W 492 nt2.57□□□□□ -2
CUE1P38428 ATP12YJL180C 978 nt2.57□□□□□ -2
CUE1P38428 INP1YMR204C 1263 nt2.57□□□□□ -2
CUE1P38428 YNL203CYNL203C 612 nt2.57□□□□□ -2
CUE1P38428 TEX1YNL253W 1269 nt2.57□□□□□ -2
CUE1P38428 YPR027CYPR027C 834 nt2.57□□□□□ -2
CUE1P38428 snR42snR42 351 nt2.57□□□□□ -2
CUE1P38428 YCL001W-AYCL001W-A 462 nt2.57□□□□□ -2
CUE1P38428 DSE4YNR067C 3354 nt2.57□□□□□ -2
CUE1P38428 RIX1YHR197W 2292 nt2.57□□□□□ -2
CUE1P38428 MUS81YDR386W 1899 nt2.56□□□□□ -2
CUE1P38428 NFT1YKR103W 3657 nt2.56□□□□□ -2
CUE1P38428 PAM1YDR251W 2493 nt2.56□□□□□ -2
CUE1P38428 RDI1YDL135C 609 nt2.56□□□□□ -2
CUE1P38428 SMX2YFL017W-A 234 nt2.56□□□□□ -2
CUE1P38428 POP6YGR030C 477 nt2.56□□□□□ -2
CUE1P38428 MRPL6YHR147C 645 nt2.56□□□□□ -2
CUE1P38428 YHR214C-DYHR214C-D 294 nt2.56□□□□□ -2
CUE1P38428 YIL161WYIL161W 708 nt2.56□□□□□ -2
CUE1P38428 YJL175WYJL175W 513 nt2.56□□□□□ -2
CUE1P38428 MRPL38YKL170W 417 nt2.56□□□□□ -2
CUE1P38428 YAR069CYAR069C 294 nt2.56□□□□□ -2
CUE1P38428 SSU72YNL222W 621 nt2.56□□□□□ -2
CUE1P38428 RPN4YDL020C 1596 nt2.56□□□□□ -2
CUE1P38428 CLN2YPL256C 1638 nt2.56□□□□□ -2
CUE1P38428 JJJ1YNL227C 1773 nt2.56□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 37.6 ms