Protein–RNA interactions for Protein: P38353

SSH1, Sec sixty-one protein homolog, yeastyeast

Known RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH1P38353 DCG1YIR030C 735 nt2.64□□□□□ -1.99
SSH1P38353 YJR128WYJR128W 360 nt2.64□□□□□ -1.99
SSH1P38353 MTD1YKR080W 963 nt2.64□□□□□ -1.99
SSH1P38353 CSM3YMR048W 954 nt2.64□□□□□ -1.99
SSH1P38353 YPR074W-AYPR074W-A 171 nt2.64□□□□□ -1.99
SSH1P38353 MSS4YDR208W 2340 nt2.64□□□□□ -1.99
SSH1P38353 MET6YER091C 2304 nt2.63□□□□□ -1.99
SSH1P38353 MRS2YOR334W 1413 nt2.63□□□□□ -1.99
SSH1P38353 ERP3YDL018C 678 nt2.63□□□□□ -1.99
SSH1P38353 PNC1YGL037C 651 nt2.63□□□□□ -1.99
SSH1P38353 EPT1YHR123W 1176 nt2.63□□□□□ -1.99
SSH1P38353 SNX4YJL036W 1272 nt2.63□□□□□ -1.99
SSH1P38353 SIC1YLR079W 855 nt2.63□□□□□ -1.99
SSH1P38353 YML047W-AYML047W-A 366 nt2.63□□□□□ -1.99
SSH1P38353 HHF1YBR009C 312 nt2.63□□□□□ -1.99
SSH1P38353 YDL199CYDL199C 2064 nt2.63□□□□□ -1.99
SSH1P38353 BPT1YLL015W 4680 nt2.63□□□□□ -1.99
SSH1P38353 MOT1YPL082C 5604 nt2.62□□□□□ -1.99
SSH1P38353 NMD2YHR077C 3270 nt2.62□□□□□ -1.99
SSH1P38353 RPN4YDL020C 1596 nt2.62□□□□□ -1.99
SSH1P38353 EXO84YBR102C 2262 nt2.62□□□□□ -1.99
SSH1P38353 MIP6YHR015W 1980 nt2.62□□□□□ -1.99
SSH1P38353 PMR1YGL167C 2853 nt2.62□□□□□ -1.99
SSH1P38353 PRP8YHR165C 7242 nt2.62□□□□□ -1.99
SSH1P38353 RGC1YPR115W 3252 nt2.62□□□□□ -1.99
SSH1P38353 KEG1YFR042W 603 nt2.62□□□□□ -1.99
SSH1P38353 YGR190CYGR190C 366 nt2.62□□□□□ -1.99
SSH1P38353 YHL005CYHL005C 393 nt2.62□□□□□ -1.99
SSH1P38353 DOG1YHR044C 741 nt2.62□□□□□ -1.99
SSH1P38353 CFD1YIL003W 882 nt2.62□□□□□ -1.99
SSH1P38353 ENV10YLR065C 546 nt2.62□□□□□ -1.99
SSH1P38353 YLR290CYLR290C 834 nt2.62□□□□□ -1.99
SSH1P38353 YLR311CYLR311C 348 nt2.62□□□□□ -1.99
SSH1P38353 GLO1YML004C 981 nt2.62□□□□□ -1.99
SSH1P38353 YBL039W-BYBL039W-B 180 nt2.62□□□□□ -1.99
SSH1P38353 YNL035CYNL035C 1170 nt2.62□□□□□ -1.99
SSH1P38353 YPL107WYPL107W 747 nt2.62□□□□□ -1.99
SSH1P38353 MRP2YPR166C 348 nt2.62□□□□□ -1.99
SSH1P38353 ARA1YBR149W 1035 nt2.62□□□□□ -1.99
SSH1P38353 VPS3YDR495C 3036 nt2.62□□□□□ -1.99
SSH1P38353 NUF2YOL069W 1356 nt2.61□□□□□ -1.99
SSH1P38353 CEX1YOR112W 2286 nt2.61□□□□□ -1.99
SSH1P38353 HUL5YGL141W 2733 nt2.61□□□□□ -1.99
SSH1P38353 RDI1YDL135C 609 nt2.61□□□□□ -1.99
SSH1P38353 FIN1YDR130C 876 nt2.61□□□□□ -1.99
SSH1P38353 YDR535CYDR535C 501 nt2.61□□□□□ -1.99
SSH1P38353 CGR1YGL029W 363 nt2.61□□□□□ -1.99
SSH1P38353 GCD14YJL125C 1152 nt2.61□□□□□ -1.99
SSH1P38353 VMA5YKL080W 1179 nt2.61□□□□□ -1.99
SSH1P38353 RDN58-1RDN58-1 158 nt2.61□□□□□ -1.99
SSH1P38353 RDN58-2RDN58-2 158 nt2.61□□□□□ -1.99
SSH1P38353 CIN1YOR349W 3045 nt2.61□□□□□ -1.99
SSH1P38353 HEH2YDR458C 1992 nt2.61□□□□□ -1.99
SSH1P38353 TOM1YDR457W 9807 nt2.6□□□□□ -1.99
SSH1P38353 IKI3YLR384C 4050 nt2.6□□□□□ -1.99
SSH1P38353 EBS1YDR206W 2655 nt2.6□□□□□ -1.99
SSH1P38353 UTP14YML093W 2700 nt2.6□□□□□ -1.99
SSH1P38353 PIN4YBL051C 2007 nt2.6□□□□□ -1.99
SSH1P38353 GRX2YDR513W 432 nt2.6□□□□□ -1.99
SSH1P38353 THO1YER063W 657 nt2.6□□□□□ -1.99
SSH1P38353 PPX1YHR201C 1194 nt2.6□□□□□ -1.99
SSH1P38353 RSM26YJR101W 801 nt2.6□□□□□ -1.99
SSH1P38353 AHP1YLR109W 531 nt2.6□□□□□ -1.99
SSH1P38353 RPL6AYML073C 531 nt2.6□□□□□ -1.99
SSH1P38353 EAF7YNL136W 1278 nt2.6□□□□□ -1.99
SSH1P38353 RSM19YNR037C 276 nt2.6□□□□□ -1.99
SSH1P38353 UBP14YBR058C 2346 nt2.6□□□□□ -1.99
SSH1P38353 SEC7YDR170C 6030 nt2.6□□□□□ -1.99
SSH1P38353 SRP68YPL243W 1800 nt2.59□□□□□ -1.99
SSH1P38353 FAA2YER015W 2235 nt2.59□□□□□ -1.99
SSH1P38353 RRP42YDL111C 798 nt2.59□□□□□ -1.99
SSH1P38353 RPL35BYDL136W 363 nt2.59□□□□□ -1.99
SSH1P38353 MRH1YDR033W 963 nt2.59□□□□□ -1.99
SSH1P38353 SMT3YDR510W 306 nt2.59□□□□□ -1.99
SSH1P38353 PAU10YDR542W 363 nt2.59□□□□□ -1.99
SSH1P38353 PAU11YGL261C 363 nt2.59□□□□□ -1.99
SSH1P38353 PAU13YHL046C 363 nt2.59□□□□□ -1.99
SSH1P38353 YIL024CYIL024C 570 nt2.59□□□□□ -1.99
SSH1P38353 PAU4YLR461W 363 nt2.59□□□□□ -1.99
SSH1P38353 YMR075C-AYMR075C-A 366 nt2.59□□□□□ -1.99
SSH1P38353 YMR178WYMR178W 825 nt2.59□□□□□ -1.99
SSH1P38353 RPL20AYMR242C 519 nt2.59□□□□□ -1.99
SSH1P38353 AAR2YBL074C 1068 nt2.59□□□□□ -1.99
SSH1P38353 LCL1YPL056C 306 nt2.59□□□□□ -1.99
SSH1P38353 YPR053CYPR053C 456 nt2.59□□□□□ -1.99
SSH1P38353 SPP381YBR152W 876 nt2.59□□□□□ -1.99
SSH1P38353 VPS30YPL120W 1674 nt2.59□□□□□ -2
SSH1P38353 SPP382YLR424W 2127 nt2.59□□□□□ -2
SSH1P38353 MDM1YML104C 3384 nt2.58□□□□□ -2
SSH1P38353 ERG11YHR007C 1593 nt2.58□□□□□ -2
SSH1P38353 YDR239CYDR239C 2364 nt2.58□□□□□ -2
SSH1P38353 TSC13YDL015C 933 nt2.58□□□□□ -2
SSH1P38353 YHR097CYHR097C 1101 nt2.58□□□□□ -2
SSH1P38353 YHR214C-DYHR214C-D 294 nt2.58□□□□□ -2
SSH1P38353 YKL162CYKL162C 1209 nt2.58□□□□□ -2
SSH1P38353 PIR1YKL164C 1026 nt2.58□□□□□ -2
SSH1P38353 YKR011CYKR011C 1062 nt2.58□□□□□ -2
SSH1P38353 OMA1YKR087C 1038 nt2.58□□□□□ -2
SSH1P38353 RNH203YLR154C 333 nt2.58□□□□□ -2
SSH1P38353 YAR069CYAR069C 294 nt2.58□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 34.9 ms