Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 AC007322.4-201ENST00000509611 723 ntBASIC21.21■□□□□ 0.99
TMEFF1Q8IYR6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.21■□□□□ 0.99
TMEFF1Q8IYR6 AC069236.1-201ENST00000604339 616 ntBASIC21.21■□□□□ 0.99
TMEFF1Q8IYR6 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.21■□□□□ 0.99
TMEFF1Q8IYR6 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
TMEFF1Q8IYR6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
TMEFF1Q8IYR6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
TMEFF1Q8IYR6 BX276092.2-201ENST00000417668 665 ntBASIC21.2■□□□□ 0.98
TMEFF1Q8IYR6 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TMEFF1Q8IYR6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.2■□□□□ 0.98
TMEFF1Q8IYR6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
TMEFF1Q8IYR6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TMEFF1Q8IYR6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TMEFF1Q8IYR6 AP006587.3-201ENST00000525742 1516 ntBASIC21.19■□□□□ 0.98
TMEFF1Q8IYR6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.19■□□□□ 0.98
TMEFF1Q8IYR6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TMEFF1Q8IYR6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TMEFF1Q8IYR6 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TMEFF1Q8IYR6 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TMEFF1Q8IYR6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.19■□□□□ 0.98
TMEFF1Q8IYR6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TMEFF1Q8IYR6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
TMEFF1Q8IYR6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TMEFF1Q8IYR6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.19■□□□□ 0.98
TMEFF1Q8IYR6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.19■□□□□ 0.98
TMEFF1Q8IYR6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.19■□□□□ 0.98
TMEFF1Q8IYR6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
TMEFF1Q8IYR6 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
TMEFF1Q8IYR6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.19■□□□□ 0.98
TMEFF1Q8IYR6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.19■□□□□ 0.98
TMEFF1Q8IYR6 AC092118.2-201ENST00000613495 667 ntBASIC21.19■□□□□ 0.98
TMEFF1Q8IYR6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.19■□□□□ 0.98
TMEFF1Q8IYR6 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TMEFF1Q8IYR6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TMEFF1Q8IYR6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TMEFF1Q8IYR6 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.19■□□□□ 0.98
TMEFF1Q8IYR6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TMEFF1Q8IYR6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.19■□□□□ 0.98
TMEFF1Q8IYR6 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TMEFF1Q8IYR6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TMEFF1Q8IYR6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TMEFF1Q8IYR6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
TMEFF1Q8IYR6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TMEFF1Q8IYR6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TMEFF1Q8IYR6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
TMEFF1Q8IYR6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.18■□□□□ 0.98
TMEFF1Q8IYR6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.18■□□□□ 0.98
TMEFF1Q8IYR6 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.18■□□□□ 0.98
TMEFF1Q8IYR6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.18■□□□□ 0.98
TMEFF1Q8IYR6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TMEFF1Q8IYR6 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TMEFF1Q8IYR6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TMEFF1Q8IYR6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TMEFF1Q8IYR6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TMEFF1Q8IYR6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TMEFF1Q8IYR6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TMEFF1Q8IYR6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TMEFF1Q8IYR6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TMEFF1Q8IYR6 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TMEFF1Q8IYR6 AL512625.2-201ENST00000417533 625 ntBASIC21.17■□□□□ 0.98
TMEFF1Q8IYR6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.17■□□□□ 0.98
TMEFF1Q8IYR6 RPS2P52-201ENST00000469610 820 ntBASIC21.17■□□□□ 0.98
TMEFF1Q8IYR6 RARRES2P4-201ENST00000514074 484 ntBASIC21.17■□□□□ 0.98
TMEFF1Q8IYR6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.17■□□□□ 0.98
TMEFF1Q8IYR6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TMEFF1Q8IYR6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TMEFF1Q8IYR6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TMEFF1Q8IYR6 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TMEFF1Q8IYR6 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TMEFF1Q8IYR6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TMEFF1Q8IYR6 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TMEFF1Q8IYR6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TMEFF1Q8IYR6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TMEFF1Q8IYR6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TMEFF1Q8IYR6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TMEFF1Q8IYR6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TMEFF1Q8IYR6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TMEFF1Q8IYR6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.16■□□□□ 0.98
TMEFF1Q8IYR6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TMEFF1Q8IYR6 AC120498.10-201ENST00000621827 505 ntBASIC21.16■□□□□ 0.98
TMEFF1Q8IYR6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.16■□□□□ 0.98
TMEFF1Q8IYR6 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TMEFF1Q8IYR6 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TMEFF1Q8IYR6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.16■□□□□ 0.98
TMEFF1Q8IYR6 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TMEFF1Q8IYR6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.15■□□□□ 0.98
TMEFF1Q8IYR6 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TMEFF1Q8IYR6 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TMEFF1Q8IYR6 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TMEFF1Q8IYR6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TMEFF1Q8IYR6 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TMEFF1Q8IYR6 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TMEFF1Q8IYR6 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TMEFF1Q8IYR6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.15■□□□□ 0.98
TMEFF1Q8IYR6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.15■□□□□ 0.98
TMEFF1Q8IYR6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.15■□□□□ 0.98
TMEFF1Q8IYR6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.15■□□□□ 0.98
TMEFF1Q8IYR6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.15■□□□□ 0.98
TMEFF1Q8IYR6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TMEFF1Q8IYR6 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms