Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC32.6■■■□□ 2.81
CDC42BPAQ5VT25 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
CDC42BPAQ5VT25 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
CDC42BPAQ5VT25 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
CDC42BPAQ5VT25 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC32.6■■■□□ 2.81
CDC42BPAQ5VT25 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
CDC42BPAQ5VT25 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC32.6■■■□□ 2.81
CDC42BPAQ5VT25 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
CDC42BPAQ5VT25 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC32.59■■■□□ 2.81
CDC42BPAQ5VT25 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
CDC42BPAQ5VT25 AC010980.2-201ENST00000587099 1412 ntBASIC32.59■■■□□ 2.81
CDC42BPAQ5VT25 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
CDC42BPAQ5VT25 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC32.59■■■□□ 2.81
CDC42BPAQ5VT25 AC091874.3-201ENST00000512672 1195 ntBASIC32.59■■■□□ 2.81
CDC42BPAQ5VT25 ADM-205ENST00000528544 586 ntTSL 2 BASIC32.59■■■□□ 2.81
CDC42BPAQ5VT25 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC32.59■■■□□ 2.81
CDC42BPAQ5VT25 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC32.59■■■□□ 2.81
CDC42BPAQ5VT25 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
CDC42BPAQ5VT25 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC32.58■■■□□ 2.81
CDC42BPAQ5VT25 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC32.58■■■□□ 2.81
CDC42BPAQ5VT25 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC32.58■■■□□ 2.81
CDC42BPAQ5VT25 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
CDC42BPAQ5VT25 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
CDC42BPAQ5VT25 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC32.58■■■□□ 2.81
CDC42BPAQ5VT25 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.81
CDC42BPAQ5VT25 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC32.57■■■□□ 2.81
CDC42BPAQ5VT25 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.81
CDC42BPAQ5VT25 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC32.57■■■□□ 2.81
CDC42BPAQ5VT25 GAS7-202ENST00000396115 929 ntTSL 5 BASIC32.57■■■□□ 2.81
CDC42BPAQ5VT25 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC32.57■■■□□ 2.81
CDC42BPAQ5VT25 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC32.57■■■□□ 2.81
CDC42BPAQ5VT25 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC32.57■■■□□ 2.8
CDC42BPAQ5VT25 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
CDC42BPAQ5VT25 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC32.57■■■□□ 2.8
CDC42BPAQ5VT25 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC32.57■■■□□ 2.8
CDC42BPAQ5VT25 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC32.56■■■□□ 2.8
CDC42BPAQ5VT25 GCA-201ENST00000233612 1694 ntTSL 2 BASIC32.56■■■□□ 2.8
CDC42BPAQ5VT25 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC32.56■■■□□ 2.8
CDC42BPAQ5VT25 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC32.56■■■□□ 2.8
CDC42BPAQ5VT25 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC32.56■■■□□ 2.8
CDC42BPAQ5VT25 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC32.55■■■□□ 2.8
CDC42BPAQ5VT25 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC32.55■■■□□ 2.8
CDC42BPAQ5VT25 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC32.55■■■□□ 2.8
CDC42BPAQ5VT25 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
CDC42BPAQ5VT25 AC008175.2-201ENST00000612840 297 ntBASIC32.55■■■□□ 2.8
CDC42BPAQ5VT25 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
CDC42BPAQ5VT25 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CDC42BPAQ5VT25 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CDC42BPAQ5VT25 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
CDC42BPAQ5VT25 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
CDC42BPAQ5VT25 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CDC42BPAQ5VT25 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CDC42BPAQ5VT25 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CDC42BPAQ5VT25 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC32.54■■■□□ 2.8
CDC42BPAQ5VT25 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC32.54■■■□□ 2.8
CDC42BPAQ5VT25 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC32.54■■■□□ 2.8
CDC42BPAQ5VT25 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC32.54■■■□□ 2.8
CDC42BPAQ5VT25 CD44-222ENST00000526025 1052 ntTSL 2 BASIC32.54■■■□□ 2.8
CDC42BPAQ5VT25 AC243732.1-201ENST00000612648 864 ntBASIC32.54■■■□□ 2.8
CDC42BPAQ5VT25 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CDC42BPAQ5VT25 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC32.53■■■□□ 2.8
CDC42BPAQ5VT25 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC32.53■■■□□ 2.8
CDC42BPAQ5VT25 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
CDC42BPAQ5VT25 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC32.53■■■□□ 2.8
CDC42BPAQ5VT25 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC32.53■■■□□ 2.8
CDC42BPAQ5VT25 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC32.53■■■□□ 2.8
CDC42BPAQ5VT25 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
CDC42BPAQ5VT25 AC139530.1-201ENST00000575312 1977 ntBASIC32.53■■■□□ 2.8
CDC42BPAQ5VT25 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CDC42BPAQ5VT25 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC32.52■■■□□ 2.8
CDC42BPAQ5VT25 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
CDC42BPAQ5VT25 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC32.52■■■□□ 2.8
CDC42BPAQ5VT25 POU5F1P4-201ENST00000413175 1085 ntBASIC32.51■■■□□ 2.8
CDC42BPAQ5VT25 GCSHP5-201ENST00000443090 522 ntBASIC32.51■■■□□ 2.8
CDC42BPAQ5VT25 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
CDC42BPAQ5VT25 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC32.51■■■□□ 2.8
CDC42BPAQ5VT25 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC32.51■■■□□ 2.8
CDC42BPAQ5VT25 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC32.51■■■□□ 2.8
CDC42BPAQ5VT25 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC32.51■■■□□ 2.79
CDC42BPAQ5VT25 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
CDC42BPAQ5VT25 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
CDC42BPAQ5VT25 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC32.51■■■□□ 2.79
CDC42BPAQ5VT25 INO80E-214ENST00000620599 515 ntTSL 2 BASIC32.51■■■□□ 2.79
CDC42BPAQ5VT25 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
CDC42BPAQ5VT25 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC32.51■■■□□ 2.79
CDC42BPAQ5VT25 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC32.51■■■□□ 2.79
CDC42BPAQ5VT25 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
CDC42BPAQ5VT25 AC061975.6-201ENST00000579045 1553 ntBASIC32.5■■■□□ 2.79
CDC42BPAQ5VT25 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
CDC42BPAQ5VT25 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC32.5■■■□□ 2.79
CDC42BPAQ5VT25 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
CDC42BPAQ5VT25 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.5■■■□□ 2.79
CDC42BPAQ5VT25 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
CDC42BPAQ5VT25 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC32.49■■■□□ 2.79
CDC42BPAQ5VT25 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC32.49■■■□□ 2.79
CDC42BPAQ5VT25 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC32.49■■■□□ 2.79
CDC42BPAQ5VT25 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CDC42BPAQ5VT25 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CDC42BPAQ5VT25 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC32.49■■■□□ 2.79
CDC42BPAQ5VT25 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC32.49■■■□□ 2.79
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms