Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD4Q9H0A8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.79■□□□□ 0.6
COMMD4Q9H0A8 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD4Q9H0A8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.79■□□□□ 0.6
COMMD4Q9H0A8 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.79■□□□□ 0.6
COMMD4Q9H0A8 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.79■□□□□ 0.6
COMMD4Q9H0A8 MIR6724-1-201ENST00000616420 92 ntBASIC18.79■□□□□ 0.6
COMMD4Q9H0A8 MIR6724-2-201ENST00000616483 92 ntBASIC18.79■□□□□ 0.6
COMMD4Q9H0A8 MIR6724-4-201ENST00000617390 92 ntBASIC18.79■□□□□ 0.6
COMMD4Q9H0A8 MIR6724-3-201ENST00000622482 92 ntBASIC18.79■□□□□ 0.6
COMMD4Q9H0A8 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.79■□□□□ 0.6
COMMD4Q9H0A8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD4Q9H0A8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD4Q9H0A8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD4Q9H0A8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD4Q9H0A8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD4Q9H0A8 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.79■□□□□ 0.6
COMMD4Q9H0A8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD4Q9H0A8 AF106564.1-201ENST00000607058 2553 ntBASIC18.79■□□□□ 0.6
COMMD4Q9H0A8 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COMMD4Q9H0A8 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
COMMD4Q9H0A8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COMMD4Q9H0A8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COMMD4Q9H0A8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
COMMD4Q9H0A8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
COMMD4Q9H0A8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COMMD4Q9H0A8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COMMD4Q9H0A8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.78■□□□□ 0.6
COMMD4Q9H0A8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
COMMD4Q9H0A8 AC087239.1-201ENST00000622671 572 ntBASIC18.78■□□□□ 0.6
COMMD4Q9H0A8 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COMMD4Q9H0A8 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COMMD4Q9H0A8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
COMMD4Q9H0A8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
COMMD4Q9H0A8 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
COMMD4Q9H0A8 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COMMD4Q9H0A8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.78■□□□□ 0.6
COMMD4Q9H0A8 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
COMMD4Q9H0A8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COMMD4Q9H0A8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COMMD4Q9H0A8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COMMD4Q9H0A8 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
COMMD4Q9H0A8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COMMD4Q9H0A8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COMMD4Q9H0A8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COMMD4Q9H0A8 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.77■□□□□ 0.6
COMMD4Q9H0A8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COMMD4Q9H0A8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COMMD4Q9H0A8 pRNA.6-201ENST00000610482 90 ntBASIC18.77■□□□□ 0.6
COMMD4Q9H0A8 pRNA.5-201ENST00000612139 90 ntBASIC18.77■□□□□ 0.6
COMMD4Q9H0A8 pRNA.11-201ENST00000618423 90 ntBASIC18.77■□□□□ 0.6
COMMD4Q9H0A8 pRNA.13-201ENST00000619112 90 ntBASIC18.77■□□□□ 0.6
COMMD4Q9H0A8 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.77■□□□□ 0.6
COMMD4Q9H0A8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.77■□□□□ 0.6
COMMD4Q9H0A8 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COMMD4Q9H0A8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COMMD4Q9H0A8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.77■□□□□ 0.6
COMMD4Q9H0A8 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
COMMD4Q9H0A8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
COMMD4Q9H0A8 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.76■□□□□ 0.59
COMMD4Q9H0A8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.76■□□□□ 0.59
COMMD4Q9H0A8 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
COMMD4Q9H0A8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
COMMD4Q9H0A8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.76■□□□□ 0.59
COMMD4Q9H0A8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD4Q9H0A8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD4Q9H0A8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.76■□□□□ 0.59
COMMD4Q9H0A8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
COMMD4Q9H0A8 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD4Q9H0A8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
COMMD4Q9H0A8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
COMMD4Q9H0A8 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.76■□□□□ 0.59
COMMD4Q9H0A8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD4Q9H0A8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COMMD4Q9H0A8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.75■□□□□ 0.59
COMMD4Q9H0A8 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COMMD4Q9H0A8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
COMMD4Q9H0A8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.75■□□□□ 0.59
COMMD4Q9H0A8 AC026471.6-201ENST00000622954 1905 ntBASIC18.75■□□□□ 0.59
COMMD4Q9H0A8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.75■□□□□ 0.59
COMMD4Q9H0A8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
COMMD4Q9H0A8 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.75■□□□□ 0.59
COMMD4Q9H0A8 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.75■□□□□ 0.59
COMMD4Q9H0A8 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COMMD4Q9H0A8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.74■□□□□ 0.59
COMMD4Q9H0A8 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COMMD4Q9H0A8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
COMMD4Q9H0A8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COMMD4Q9H0A8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.74■□□□□ 0.59
COMMD4Q9H0A8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
COMMD4Q9H0A8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
COMMD4Q9H0A8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.74■□□□□ 0.59
COMMD4Q9H0A8 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
COMMD4Q9H0A8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COMMD4Q9H0A8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
COMMD4Q9H0A8 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COMMD4Q9H0A8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
COMMD4Q9H0A8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.74■□□□□ 0.59
COMMD4Q9H0A8 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COMMD4Q9H0A8 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms