Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
PCDHAC2Q9Y5I4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHAC2Q9Y5I4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
PCDHAC2Q9Y5I4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHAC2Q9Y5I4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC25.65■■□□□ 1.7
PCDHAC2Q9Y5I4 CYP2T1P-201ENST00000432607 1285 ntBASIC25.65■■□□□ 1.7
PCDHAC2Q9Y5I4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC25.65■■□□□ 1.7
PCDHAC2Q9Y5I4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC25.65■■□□□ 1.7
PCDHAC2Q9Y5I4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC25.65■■□□□ 1.7
PCDHAC2Q9Y5I4 AC133041.1-202ENST00000642053 222 ntBASIC25.65■■□□□ 1.7
PCDHAC2Q9Y5I4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC25.65■■□□□ 1.7
PCDHAC2Q9Y5I4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHAC2Q9Y5I4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHAC2Q9Y5I4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC25.64■■□□□ 1.7
PCDHAC2Q9Y5I4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHAC2Q9Y5I4 FXN-202ENST00000396364 980 ntTSL 5 BASIC25.64■■□□□ 1.7
PCDHAC2Q9Y5I4 AC093787.1-201ENST00000450396 207 ntBASIC25.64■■□□□ 1.7
PCDHAC2Q9Y5I4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC25.64■■□□□ 1.7
PCDHAC2Q9Y5I4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC25.64■■□□□ 1.7
PCDHAC2Q9Y5I4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHAC2Q9Y5I4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC25.64■■□□□ 1.7
PCDHAC2Q9Y5I4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
PCDHAC2Q9Y5I4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
PCDHAC2Q9Y5I4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHAC2Q9Y5I4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHAC2Q9Y5I4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHAC2Q9Y5I4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
PCDHAC2Q9Y5I4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHAC2Q9Y5I4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
PCDHAC2Q9Y5I4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC25.63■■□□□ 1.69
PCDHAC2Q9Y5I4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC25.63■■□□□ 1.69
PCDHAC2Q9Y5I4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC25.63■■□□□ 1.69
PCDHAC2Q9Y5I4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC25.63■■□□□ 1.69
PCDHAC2Q9Y5I4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHAC2Q9Y5I4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHAC2Q9Y5I4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHAC2Q9Y5I4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC25.63■■□□□ 1.69
PCDHAC2Q9Y5I4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHAC2Q9Y5I4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHAC2Q9Y5I4 AC073210.2-201ENST00000430369 194 ntBASIC25.62■■□□□ 1.69
PCDHAC2Q9Y5I4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC25.62■■□□□ 1.69
PCDHAC2Q9Y5I4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC25.62■■□□□ 1.69
PCDHAC2Q9Y5I4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC25.62■■□□□ 1.69
PCDHAC2Q9Y5I4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC25.62■■□□□ 1.69
PCDHAC2Q9Y5I4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHAC2Q9Y5I4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC25.62■■□□□ 1.69
PCDHAC2Q9Y5I4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC25.61■■□□□ 1.69
PCDHAC2Q9Y5I4 AC087742.1-201ENST00000575880 1738 ntBASIC25.61■■□□□ 1.69
PCDHAC2Q9Y5I4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHAC2Q9Y5I4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
PCDHAC2Q9Y5I4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC25.61■■□□□ 1.69
PCDHAC2Q9Y5I4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC25.61■■□□□ 1.69
PCDHAC2Q9Y5I4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHAC2Q9Y5I4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC25.61■■□□□ 1.69
PCDHAC2Q9Y5I4 MIPEPP3-201ENST00000412105 444 ntBASIC25.61■■□□□ 1.69
PCDHAC2Q9Y5I4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
PCDHAC2Q9Y5I4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC25.61■■□□□ 1.69
PCDHAC2Q9Y5I4 AC008687.6-201ENST00000596318 630 ntBASIC25.61■■□□□ 1.69
PCDHAC2Q9Y5I4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
PCDHAC2Q9Y5I4 AC013268.1-206ENST00000638368 961 ntBASIC25.61■■□□□ 1.69
PCDHAC2Q9Y5I4 AC112229.1-201ENST00000639295 961 ntBASIC25.61■■□□□ 1.69
PCDHAC2Q9Y5I4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.61■■□□□ 1.69
PCDHAC2Q9Y5I4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHAC2Q9Y5I4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHAC2Q9Y5I4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
PCDHAC2Q9Y5I4 AC137767.1-201ENST00000602918 1920 ntBASIC25.61■■□□□ 1.69
PCDHAC2Q9Y5I4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHAC2Q9Y5I4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
PCDHAC2Q9Y5I4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHAC2Q9Y5I4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHAC2Q9Y5I4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHAC2Q9Y5I4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHAC2Q9Y5I4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
PCDHAC2Q9Y5I4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC25.6■■□□□ 1.69
PCDHAC2Q9Y5I4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC25.6■■□□□ 1.69
PCDHAC2Q9Y5I4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC25.6■■□□□ 1.69
PCDHAC2Q9Y5I4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC25.6■■□□□ 1.69
PCDHAC2Q9Y5I4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHAC2Q9Y5I4 AC053503.5-201ENST00000601508 636 ntBASIC25.6■■□□□ 1.69
PCDHAC2Q9Y5I4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHAC2Q9Y5I4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHAC2Q9Y5I4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC25.6■■□□□ 1.69
PCDHAC2Q9Y5I4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC25.59■■□□□ 1.69
PCDHAC2Q9Y5I4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC25.59■■□□□ 1.69
PCDHAC2Q9Y5I4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHAC2Q9Y5I4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC25.59■■□□□ 1.69
PCDHAC2Q9Y5I4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC25.59■■□□□ 1.69
PCDHAC2Q9Y5I4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC25.59■■□□□ 1.69
PCDHAC2Q9Y5I4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
PCDHAC2Q9Y5I4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHAC2Q9Y5I4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHAC2Q9Y5I4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC25.58■■□□□ 1.69
PCDHAC2Q9Y5I4 SLC7A5P1-201ENST00000568957 537 ntBASIC25.58■■□□□ 1.69
PCDHAC2Q9Y5I4 AC016405.3-201ENST00000607710 860 ntBASIC25.58■■□□□ 1.69
PCDHAC2Q9Y5I4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC25.58■■□□□ 1.69
PCDHAC2Q9Y5I4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHAC2Q9Y5I4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC25.58■■□□□ 1.68
PCDHAC2Q9Y5I4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
PCDHAC2Q9Y5I4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHAC2Q9Y5I4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms