Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.53■■□□□ 1.36
TRIM43Q96BQ3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM43Q96BQ3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM43Q96BQ3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM43Q96BQ3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC23.52■■□□□ 1.36
TRIM43Q96BQ3 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM43Q96BQ3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC23.52■■□□□ 1.36
TRIM43Q96BQ3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM43Q96BQ3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM43Q96BQ3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC23.52■■□□□ 1.36
TRIM43Q96BQ3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
TRIM43Q96BQ3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.52■■□□□ 1.36
TRIM43Q96BQ3 AC073648.6-201ENST00000641589 218 ntBASIC23.52■■□□□ 1.36
TRIM43Q96BQ3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM43Q96BQ3 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM43Q96BQ3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM43Q96BQ3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM43Q96BQ3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM43Q96BQ3 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
TRIM43Q96BQ3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM43Q96BQ3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.51■■□□□ 1.35
TRIM43Q96BQ3 AC008550.1-201ENST00000511500 884 ntBASIC23.51■■□□□ 1.35
TRIM43Q96BQ3 AC079089.2-201ENST00000531211 1277 ntBASIC23.51■■□□□ 1.35
TRIM43Q96BQ3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM43Q96BQ3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC23.51■■□□□ 1.35
TRIM43Q96BQ3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM43Q96BQ3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.51■■□□□ 1.35
TRIM43Q96BQ3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRIM43Q96BQ3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRIM43Q96BQ3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC23.5■■□□□ 1.35
TRIM43Q96BQ3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TRIM43Q96BQ3 AC004812.2-201ENST00000611079 2094 ntBASIC23.5■■□□□ 1.35
TRIM43Q96BQ3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.5■■□□□ 1.35
TRIM43Q96BQ3 AC026366.1-201ENST00000488803 879 ntBASIC23.5■■□□□ 1.35
TRIM43Q96BQ3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC23.5■■□□□ 1.35
TRIM43Q96BQ3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC23.5■■□□□ 1.35
TRIM43Q96BQ3 AC053503.5-201ENST00000601508 636 ntBASIC23.5■■□□□ 1.35
TRIM43Q96BQ3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TRIM43Q96BQ3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC23.5■■□□□ 1.35
TRIM43Q96BQ3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.5■■□□□ 1.35
TRIM43Q96BQ3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.49■■□□□ 1.35
TRIM43Q96BQ3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.49■■□□□ 1.35
TRIM43Q96BQ3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM43Q96BQ3 AL139125.2-201ENST00000623134 1869 ntBASIC23.49■■□□□ 1.35
TRIM43Q96BQ3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM43Q96BQ3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM43Q96BQ3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM43Q96BQ3 UNC93B5-201ENST00000530315 699 ntBASIC23.49■■□□□ 1.35
TRIM43Q96BQ3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC23.49■■□□□ 1.35
TRIM43Q96BQ3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM43Q96BQ3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
TRIM43Q96BQ3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM43Q96BQ3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM43Q96BQ3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
TRIM43Q96BQ3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.48■■□□□ 1.35
TRIM43Q96BQ3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TRIM43Q96BQ3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC23.48■■□□□ 1.35
TRIM43Q96BQ3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.48■■□□□ 1.35
TRIM43Q96BQ3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRIM43Q96BQ3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TRIM43Q96BQ3 AC010980.2-201ENST00000587099 1412 ntBASIC23.48■■□□□ 1.35
TRIM43Q96BQ3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.48■■□□□ 1.35
TRIM43Q96BQ3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC23.48■■□□□ 1.35
TRIM43Q96BQ3 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.48■■□□□ 1.35
TRIM43Q96BQ3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRIM43Q96BQ3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
TRIM43Q96BQ3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.47■■□□□ 1.35
TRIM43Q96BQ3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TRIM43Q96BQ3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TRIM43Q96BQ3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRIM43Q96BQ3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRIM43Q96BQ3 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.47■■□□□ 1.35
TRIM43Q96BQ3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.47■■□□□ 1.35
TRIM43Q96BQ3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TRIM43Q96BQ3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC23.47■■□□□ 1.35
TRIM43Q96BQ3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC23.47■■□□□ 1.35
TRIM43Q96BQ3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TRIM43Q96BQ3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC23.47■■□□□ 1.35
TRIM43Q96BQ3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRIM43Q96BQ3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.47■■□□□ 1.35
TRIM43Q96BQ3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM43Q96BQ3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM43Q96BQ3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM43Q96BQ3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM43Q96BQ3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC23.46■■□□□ 1.35
TRIM43Q96BQ3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM43Q96BQ3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM43Q96BQ3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC23.46■■□□□ 1.35
TRIM43Q96BQ3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC23.46■■□□□ 1.35
TRIM43Q96BQ3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM43Q96BQ3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.45■■□□□ 1.35
TRIM43Q96BQ3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
TRIM43Q96BQ3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.45■■□□□ 1.34
TRIM43Q96BQ3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRIM43Q96BQ3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
TRIM43Q96BQ3 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.45■■□□□ 1.34
TRIM43Q96BQ3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRIM43Q96BQ3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
TRIM43Q96BQ3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
TRIM43Q96BQ3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms