Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC32.82■■■□□ 2.84
CDC42BPAQ5VT25 AC053503.5-201ENST00000601508 636 ntBASIC32.82■■■□□ 2.84
CDC42BPAQ5VT25 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC32.82■■■□□ 2.84
CDC42BPAQ5VT25 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
CDC42BPAQ5VT25 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
CDC42BPAQ5VT25 PPP1R14BP2-201ENST00000426284 444 ntBASIC32.81■■■□□ 2.84
CDC42BPAQ5VT25 POU5F1P3-201ENST00000428824 1078 ntBASIC32.81■■■□□ 2.84
CDC42BPAQ5VT25 AC098590.1-201ENST00000468126 897 ntBASIC32.81■■■□□ 2.84
CDC42BPAQ5VT25 AC008687.6-201ENST00000596318 630 ntBASIC32.81■■■□□ 2.84
CDC42BPAQ5VT25 ITM2C-210ENST00000620962 501 ntBASIC32.81■■■□□ 2.84
CDC42BPAQ5VT25 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
CDC42BPAQ5VT25 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
CDC42BPAQ5VT25 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
CDC42BPAQ5VT25 TERF1P5-201ENST00000477545 1207 ntBASIC32.8■■■□□ 2.84
CDC42BPAQ5VT25 RNA5SP413-201ENST00000516373 109 ntBASIC32.8■■■□□ 2.84
CDC42BPAQ5VT25 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC32.8■■■□□ 2.84
CDC42BPAQ5VT25 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC32.8■■■□□ 2.84
CDC42BPAQ5VT25 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC32.8■■■□□ 2.84
CDC42BPAQ5VT25 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC32.8■■■□□ 2.84
CDC42BPAQ5VT25 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC32.8■■■□□ 2.84
CDC42BPAQ5VT25 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
CDC42BPAQ5VT25 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
CDC42BPAQ5VT25 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC32.8■■■□□ 2.84
CDC42BPAQ5VT25 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC32.8■■■□□ 2.84
CDC42BPAQ5VT25 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC32.8■■■□□ 2.84
CDC42BPAQ5VT25 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC32.79■■■□□ 2.84
CDC42BPAQ5VT25 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC32.79■■■□□ 2.84
CDC42BPAQ5VT25 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC32.79■■■□□ 2.84
CDC42BPAQ5VT25 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC32.79■■■□□ 2.84
CDC42BPAQ5VT25 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
CDC42BPAQ5VT25 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC32.79■■■□□ 2.84
CDC42BPAQ5VT25 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
CDC42BPAQ5VT25 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC32.78■■■□□ 2.84
CDC42BPAQ5VT25 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
CDC42BPAQ5VT25 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC32.78■■■□□ 2.84
CDC42BPAQ5VT25 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
CDC42BPAQ5VT25 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC32.78■■■□□ 2.84
CDC42BPAQ5VT25 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC32.78■■■□□ 2.84
CDC42BPAQ5VT25 FGF8-207ENST00000618991 856 ntTSL 3 BASIC32.78■■■□□ 2.84
CDC42BPAQ5VT25 MYC-209ENST00000641252 345 ntBASIC32.78■■■□□ 2.84
CDC42BPAQ5VT25 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
CDC42BPAQ5VT25 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
CDC42BPAQ5VT25 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
CDC42BPAQ5VT25 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
CDC42BPAQ5VT25 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
CDC42BPAQ5VT25 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC32.77■■■□□ 2.84
CDC42BPAQ5VT25 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC32.77■■■□□ 2.84
CDC42BPAQ5VT25 OR10C1-204ENST00000622521 1039 ntBASIC32.77■■■□□ 2.84
CDC42BPAQ5VT25 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC32.77■■■□□ 2.84
CDC42BPAQ5VT25 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
CDC42BPAQ5VT25 MIPEPP3-201ENST00000412105 444 ntBASIC32.77■■■□□ 2.84
CDC42BPAQ5VT25 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC32.77■■■□□ 2.84
CDC42BPAQ5VT25 RARRES2P4-201ENST00000514074 484 ntBASIC32.77■■■□□ 2.84
CDC42BPAQ5VT25 AC092118.2-201ENST00000613495 667 ntBASIC32.77■■■□□ 2.84
CDC42BPAQ5VT25 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC32.76■■■□□ 2.84
CDC42BPAQ5VT25 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
CDC42BPAQ5VT25 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC32.76■■■□□ 2.84
CDC42BPAQ5VT25 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
CDC42BPAQ5VT25 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC32.76■■■□□ 2.83
CDC42BPAQ5VT25 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC32.76■■■□□ 2.83
CDC42BPAQ5VT25 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC32.76■■■□□ 2.83
CDC42BPAQ5VT25 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC32.76■■■□□ 2.83
CDC42BPAQ5VT25 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC32.76■■■□□ 2.83
CDC42BPAQ5VT25 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
CDC42BPAQ5VT25 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC32.75■■■□□ 2.83
CDC42BPAQ5VT25 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
CDC42BPAQ5VT25 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
CDC42BPAQ5VT25 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
CDC42BPAQ5VT25 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC32.74■■■□□ 2.83
CDC42BPAQ5VT25 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
CDC42BPAQ5VT25 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
CDC42BPAQ5VT25 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
CDC42BPAQ5VT25 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
CDC42BPAQ5VT25 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC32.74■■■□□ 2.83
CDC42BPAQ5VT25 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC32.74■■■□□ 2.83
CDC42BPAQ5VT25 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC32.74■■■□□ 2.83
CDC42BPAQ5VT25 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC32.74■■■□□ 2.83
CDC42BPAQ5VT25 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC32.74■■■□□ 2.83
CDC42BPAQ5VT25 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC32.73■■■□□ 2.83
CDC42BPAQ5VT25 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
CDC42BPAQ5VT25 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
CDC42BPAQ5VT25 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC32.72■■■□□ 2.83
CDC42BPAQ5VT25 DET1-205ENST00000558413 583 ntTSL 4 BASIC32.72■■■□□ 2.83
CDC42BPAQ5VT25 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC32.72■■■□□ 2.83
CDC42BPAQ5VT25 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
CDC42BPAQ5VT25 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
CDC42BPAQ5VT25 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
CDC42BPAQ5VT25 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC32.72■■■□□ 2.83
CDC42BPAQ5VT25 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC32.71■■■□□ 2.83
CDC42BPAQ5VT25 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
CDC42BPAQ5VT25 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
CDC42BPAQ5VT25 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
CDC42BPAQ5VT25 MIR4758-201ENST00000577688 71 ntBASIC32.71■■■□□ 2.83
CDC42BPAQ5VT25 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
CDC42BPAQ5VT25 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
CDC42BPAQ5VT25 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
CDC42BPAQ5VT25 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC32.71■■■□□ 2.83
CDC42BPAQ5VT25 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC32.71■■■□□ 2.83
CDC42BPAQ5VT25 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC32.71■■■□□ 2.83
CDC42BPAQ5VT25 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC32.71■■■□□ 2.83
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms