Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP4-1Q9BYQ7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
KRTAP4-1Q9BYQ7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP4-1Q9BYQ7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP4-1Q9BYQ7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP4-1Q9BYQ7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP4-1Q9BYQ7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC11.3□□□□□ -0.6
KRTAP4-1Q9BYQ7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC11.3□□□□□ -0.6
KRTAP4-1Q9BYQ7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP4-1Q9BYQ7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP4-1Q9BYQ7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP4-1Q9BYQ7 AC073210.2-201ENST00000430369 194 ntBASIC11.3□□□□□ -0.6
KRTAP4-1Q9BYQ7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP4-1Q9BYQ7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC11.3□□□□□ -0.6
KRTAP4-1Q9BYQ7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC11.3□□□□□ -0.6
KRTAP4-1Q9BYQ7 AC133041.1-202ENST00000642053 222 ntBASIC11.3□□□□□ -0.6
KRTAP4-1Q9BYQ7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP4-1Q9BYQ7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP4-1Q9BYQ7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP4-1Q9BYQ7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP4-1Q9BYQ7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC11.3□□□□□ -0.6
KRTAP4-1Q9BYQ7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC11.3□□□□□ -0.6
KRTAP4-1Q9BYQ7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP4-1Q9BYQ7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
KRTAP4-1Q9BYQ7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC11.3□□□□□ -0.6
KRTAP4-1Q9BYQ7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP4-1Q9BYQ7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC11.3□□□□□ -0.6
KRTAP4-1Q9BYQ7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC11.29□□□□□ -0.6
KRTAP4-1Q9BYQ7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
KRTAP4-1Q9BYQ7 AC068338.2-201ENST00000563278 1430 ntBASIC11.29□□□□□ -0.6
KRTAP4-1Q9BYQ7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC11.29□□□□□ -0.6
KRTAP4-1Q9BYQ7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KRTAP4-1Q9BYQ7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
KRTAP4-1Q9BYQ7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
KRTAP4-1Q9BYQ7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
KRTAP4-1Q9BYQ7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
KRTAP4-1Q9BYQ7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC11.29□□□□□ -0.6
KRTAP4-1Q9BYQ7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
KRTAP4-1Q9BYQ7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC11.29□□□□□ -0.6
KRTAP4-1Q9BYQ7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KRTAP4-1Q9BYQ7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
KRTAP4-1Q9BYQ7 AC093787.1-201ENST00000450396 207 ntBASIC11.29□□□□□ -0.6
KRTAP4-1Q9BYQ7 FAM201B-201ENST00000458407 597 ntBASIC11.29□□□□□ -0.6
KRTAP4-1Q9BYQ7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
KRTAP4-1Q9BYQ7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC11.29□□□□□ -0.6
KRTAP4-1Q9BYQ7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC11.29□□□□□ -0.6
KRTAP4-1Q9BYQ7 AC138907.5-202ENST00000569484 235 ntBASIC11.29□□□□□ -0.6
KRTAP4-1Q9BYQ7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
KRTAP4-1Q9BYQ7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KRTAP4-1Q9BYQ7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC11.29□□□□□ -0.6
KRTAP4-1Q9BYQ7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC11.29□□□□□ -0.6
KRTAP4-1Q9BYQ7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
KRTAP4-1Q9BYQ7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KRTAP4-1Q9BYQ7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
KRTAP4-1Q9BYQ7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC11.28□□□□□ -0.6
KRTAP4-1Q9BYQ7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
KRTAP4-1Q9BYQ7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
KRTAP4-1Q9BYQ7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC11.28□□□□□ -0.6
KRTAP4-1Q9BYQ7 MIPEPP3-201ENST00000412105 444 ntBASIC11.28□□□□□ -0.6
KRTAP4-1Q9BYQ7 POU5F1P3-201ENST00000428824 1078 ntBASIC11.28□□□□□ -0.6
KRTAP4-1Q9BYQ7 CYP2T1P-201ENST00000432607 1285 ntBASIC11.28□□□□□ -0.6
KRTAP4-1Q9BYQ7 RPS2P52-201ENST00000469610 820 ntBASIC11.28□□□□□ -0.6
KRTAP4-1Q9BYQ7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC11.28□□□□□ -0.6
KRTAP4-1Q9BYQ7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC11.28□□□□□ -0.6
KRTAP4-1Q9BYQ7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC11.28□□□□□ -0.6
KRTAP4-1Q9BYQ7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
KRTAP4-1Q9BYQ7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC11.28□□□□□ -0.6
KRTAP4-1Q9BYQ7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
KRTAP4-1Q9BYQ7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
KRTAP4-1Q9BYQ7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
KRTAP4-1Q9BYQ7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
KRTAP4-1Q9BYQ7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
KRTAP4-1Q9BYQ7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC11.27□□□□□ -0.61
KRTAP4-1Q9BYQ7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
KRTAP4-1Q9BYQ7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
KRTAP4-1Q9BYQ7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
KRTAP4-1Q9BYQ7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC11.27□□□□□ -0.61
KRTAP4-1Q9BYQ7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC11.27□□□□□ -0.61
KRTAP4-1Q9BYQ7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
KRTAP4-1Q9BYQ7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC11.27□□□□□ -0.61
KRTAP4-1Q9BYQ7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC11.27□□□□□ -0.61
KRTAP4-1Q9BYQ7 RNA5SP413-201ENST00000516373 109 ntBASIC11.27□□□□□ -0.61
KRTAP4-1Q9BYQ7 AC079089.2-201ENST00000531211 1277 ntBASIC11.27□□□□□ -0.61
KRTAP4-1Q9BYQ7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC11.27□□□□□ -0.61
KRTAP4-1Q9BYQ7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC11.27□□□□□ -0.61
KRTAP4-1Q9BYQ7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC11.27□□□□□ -0.61
KRTAP4-1Q9BYQ7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
KRTAP4-1Q9BYQ7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC11.27□□□□□ -0.61
KRTAP4-1Q9BYQ7 ANOS2P-203ENST00000472227 1816 ntBASIC11.27□□□□□ -0.61
KRTAP4-1Q9BYQ7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
KRTAP4-1Q9BYQ7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC11.27□□□□□ -0.61
KRTAP4-1Q9BYQ7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
KRTAP4-1Q9BYQ7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
KRTAP4-1Q9BYQ7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
KRTAP4-1Q9BYQ7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
KRTAP4-1Q9BYQ7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC11.27□□□□□ -0.61
KRTAP4-1Q9BYQ7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC11.27□□□□□ -0.61
KRTAP4-1Q9BYQ7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
KRTAP4-1Q9BYQ7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
KRTAP4-1Q9BYQ7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms