Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
LYSMD4Q5XG99 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.31■■□□□ 1
LYSMD4Q5XG99 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LYSMD4Q5XG99 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.31■■□□□ 1
LYSMD4Q5XG99 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.31■■□□□ 1
LYSMD4Q5XG99 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
LYSMD4Q5XG99 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
LYSMD4Q5XG99 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
LYSMD4Q5XG99 AC079089.2-201ENST00000531211 1277 ntBASIC21.3■■□□□ 1
LYSMD4Q5XG99 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LYSMD4Q5XG99 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
LYSMD4Q5XG99 AP004607.7-201ENST00000527152 1677 ntBASIC21.3■■□□□ 1
LYSMD4Q5XG99 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
LYSMD4Q5XG99 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.3■■□□□ 1
LYSMD4Q5XG99 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.3■■□□□ 1
LYSMD4Q5XG99 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LYSMD4Q5XG99 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
LYSMD4Q5XG99 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
LYSMD4Q5XG99 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LYSMD4Q5XG99 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.29■■□□□ 1
LYSMD4Q5XG99 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LYSMD4Q5XG99 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.29■■□□□ 1
LYSMD4Q5XG99 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LYSMD4Q5XG99 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.29■■□□□ 1
LYSMD4Q5XG99 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.29■■□□□ 1
LYSMD4Q5XG99 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LYSMD4Q5XG99 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.29■■□□□ 1
LYSMD4Q5XG99 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.29■■□□□ 1
LYSMD4Q5XG99 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.29■■□□□ 1
LYSMD4Q5XG99 POU5F1P3-201ENST00000428824 1078 ntBASIC21.29■■□□□ 1
LYSMD4Q5XG99 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.29■■□□□ 1
LYSMD4Q5XG99 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
LYSMD4Q5XG99 AC093827.2-201ENST00000512654 315 ntBASIC21.29■■□□□ 1
LYSMD4Q5XG99 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.29■■□□□ 1
LYSMD4Q5XG99 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.29■■□□□ 1
LYSMD4Q5XG99 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.29■■□□□ 1
LYSMD4Q5XG99 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.29■■□□□ 1
LYSMD4Q5XG99 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LYSMD4Q5XG99 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.29■■□□□ 1
LYSMD4Q5XG99 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
LYSMD4Q5XG99 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.29■■□□□ 1
LYSMD4Q5XG99 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LYSMD4Q5XG99 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.28■■□□□ 1
LYSMD4Q5XG99 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LYSMD4Q5XG99 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
LYSMD4Q5XG99 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LYSMD4Q5XG99 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.28■■□□□ 1
LYSMD4Q5XG99 CYP2T1P-201ENST00000432607 1285 ntBASIC21.28■■□□□ 1
LYSMD4Q5XG99 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
LYSMD4Q5XG99 TERF1P5-201ENST00000477545 1207 ntBASIC21.28■■□□□ 1
LYSMD4Q5XG99 RNA5SP413-201ENST00000516373 109 ntBASIC21.28■■□□□ 1
LYSMD4Q5XG99 AC008687.6-201ENST00000596318 630 ntBASIC21.28■■□□□ 1
LYSMD4Q5XG99 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.28■■□□□ 1
LYSMD4Q5XG99 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LYSMD4Q5XG99 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LYSMD4Q5XG99 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
LYSMD4Q5XG99 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.28■■□□□ 1
LYSMD4Q5XG99 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
LYSMD4Q5XG99 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LYSMD4Q5XG99 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.27■■□□□ 1
LYSMD4Q5XG99 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LYSMD4Q5XG99 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
LYSMD4Q5XG99 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.27■■□□□ 1
LYSMD4Q5XG99 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LYSMD4Q5XG99 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LYSMD4Q5XG99 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.27■■□□□ 1
LYSMD4Q5XG99 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.27■■□□□ 1
LYSMD4Q5XG99 MKRN4P-201ENST00000444706 1521 ntBASIC21.27■■□□□ 1
LYSMD4Q5XG99 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.27■■□□□ 1
LYSMD4Q5XG99 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
LYSMD4Q5XG99 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.27■■□□□ 1
LYSMD4Q5XG99 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.27■□□□□ 0.99
LYSMD4Q5XG99 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
LYSMD4Q5XG99 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LYSMD4Q5XG99 KRT18P29-201ENST00000397031 1267 ntBASIC21.26■□□□□ 0.99
LYSMD4Q5XG99 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.26■□□□□ 0.99
LYSMD4Q5XG99 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LYSMD4Q5XG99 SLC7A5P1-201ENST00000568957 537 ntBASIC21.26■□□□□ 0.99
LYSMD4Q5XG99 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.26■□□□□ 0.99
LYSMD4Q5XG99 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
LYSMD4Q5XG99 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
LYSMD4Q5XG99 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.25■□□□□ 0.99
LYSMD4Q5XG99 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LYSMD4Q5XG99 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.25■□□□□ 0.99
LYSMD4Q5XG99 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.25■□□□□ 0.99
LYSMD4Q5XG99 MIPEPP3-201ENST00000412105 444 ntBASIC21.25■□□□□ 0.99
LYSMD4Q5XG99 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.25■□□□□ 0.99
LYSMD4Q5XG99 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.25■□□□□ 0.99
LYSMD4Q5XG99 LINC01960-201ENST00000563759 1884 ntBASIC21.25■□□□□ 0.99
LYSMD4Q5XG99 ITM2C-210ENST00000620962 501 ntBASIC21.25■□□□□ 0.99
LYSMD4Q5XG99 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.25■□□□□ 0.99
LYSMD4Q5XG99 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LYSMD4Q5XG99 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LYSMD4Q5XG99 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
LYSMD4Q5XG99 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LYSMD4Q5XG99 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.24■□□□□ 0.99
LYSMD4Q5XG99 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LYSMD4Q5XG99 AC068338.2-201ENST00000563278 1430 ntBASIC21.24■□□□□ 0.99
LYSMD4Q5XG99 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LYSMD4Q5XG99 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms