Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 YIL054WYIL054W 318 nt4.2□□□□□ -1.74
RPN11P43588 YJL047C-AYJL047C-A 135 nt4.2□□□□□ -1.74
RPN11P43588 MAK16YAL025C 921 nt4.2□□□□□ -1.74
RPN11P43588 SMD3YLR147C 306 nt4.2□□□□□ -1.74
RPN11P43588 YOR034C-AYOR034C-A 243 nt4.2□□□□□ -1.74
RPN11P43588 FSH3YOR280C 801 nt4.2□□□□□ -1.74
RPN11P43588 SFG1YOR315W 1041 nt4.2□□□□□ -1.74
RPN11P43588 TAF14YPL129W 735 nt4.2□□□□□ -1.74
RPN11P43588 PBP2YBR233W 1242 nt4.2□□□□□ -1.74
RPN11P43588 VHC1YBR235W 3363 nt4.2□□□□□ -1.74
RPN11P43588 CTK1YKL139W 1587 nt4.19□□□□□ -1.74
RPN11P43588 MEK1YOR351C 1494 nt4.19□□□□□ -1.74
RPN11P43588 CDC9YDL164C 2268 nt4.19□□□□□ -1.74
RPN11P43588 SPB4YFL002C 1821 nt4.19□□□□□ -1.74
RPN11P43588 YLR307C-AYLR307C-A 264 nt4.19□□□□□ -1.74
RPN11P43588 FYV6YNL133C 522 nt4.19□□□□□ -1.74
RPN11P43588 REX4YOL080C 870 nt4.19□□□□□ -1.74
RPN11P43588 CDC21YOR074C 915 nt4.19□□□□□ -1.74
RPN11P43588 IRC13YOR235W 315 nt4.19□□□□□ -1.74
RPN11P43588 SHG1YBR258C 429 nt4.19□□□□□ -1.74
RPN11P43588 MSE1YOL033W 1611 nt4.19□□□□□ -1.74
RPN11P43588 IKS1YJL057C 2004 nt4.19□□□□□ -1.74
RPN11P43588 GAT2YMR136W 1683 nt4.19□□□□□ -1.74
RPN11P43588 HPR1YDR138W 2259 nt4.19□□□□□ -1.74
RPN11P43588 ORC6YHR118C 1308 nt4.19□□□□□ -1.74
RPN11P43588 KTR6YPL053C 1341 nt4.19□□□□□ -1.74
RPN11P43588 YGR125WYGR125W 3111 nt4.18□□□□□ -1.74
RPN11P43588 RAD54YGL163C 2697 nt4.18□□□□□ -1.74
RPN11P43588 YGR053CYGR053C 852 nt4.18□□□□□ -1.74
RPN11P43588 YGR270C-AYGR270C-A 219 nt4.18□□□□□ -1.74
RPN11P43588 YKL033W-AYKL033W-A 711 nt4.18□□□□□ -1.74
RPN11P43588 BOS1YLR078C 735 nt4.18□□□□□ -1.74
RPN11P43588 YLR444CYLR444C 303 nt4.18□□□□□ -1.74
RPN11P43588 SPC2YML055W 537 nt4.18□□□□□ -1.74
RPN11P43588 ARO1YDR127W 4767 nt4.18□□□□□ -1.74
RPN11P43588 YHR202WYHR202W 1809 nt4.18□□□□□ -1.74
RPN11P43588 YML020WYML020W 1995 nt4.18□□□□□ -1.74
RPN11P43588 VPS73YGL104C 1461 nt4.18□□□□□ -1.74
RPN11P43588 RRN7YJL025W 1545 nt4.17□□□□□ -1.74
RPN11P43588 VAC17YCL063W 1272 nt4.17□□□□□ -1.74
RPN11P43588 YCL076WYCL076W 744 nt4.17□□□□□ -1.74
RPN11P43588 CDC26YFR036W 375 nt4.17□□□□□ -1.74
RPN11P43588 FMP33YJL161W 543 nt4.17□□□□□ -1.74
RPN11P43588 YAE1YJR067C 426 nt4.17□□□□□ -1.74
RPN11P43588 ORM2YLR350W 651 nt4.17□□□□□ -1.74
RPN11P43588 ATG34YOL083W 1239 nt4.17□□□□□ -1.74
RPN11P43588 YBR013CYBR013C 390 nt4.17□□□□□ -1.74
RPN11P43588 YFL040WYFL040W 1623 nt4.17□□□□□ -1.74
RPN11P43588 TRX3YCR083W 384 nt4.16□□□□□ -1.74
RPN11P43588 BMH2YDR099W 822 nt4.16□□□□□ -1.74
RPN11P43588 HTD2YHR067W 843 nt4.16□□□□□ -1.74
RPN11P43588 YJR128WYJR128W 360 nt4.16□□□□□ -1.74
RPN11P43588 YRA2YKL214C 612 nt4.16□□□□□ -1.74
RPN11P43588 YML047W-AYML047W-A 366 nt4.16□□□□□ -1.74
RPN11P43588 PRE8YML092C 753 nt4.16□□□□□ -1.74
RPN11P43588 COX14YML129C 213 nt4.16□□□□□ -1.74
RPN11P43588 MRPS17YMR188C 714 nt4.16□□□□□ -1.74
RPN11P43588 NIP7YPL211W 546 nt4.16□□□□□ -1.74
RPN11P43588 SIN3YOL004W 4611 nt4.16□□□□□ -1.74
RPN11P43588 SBE2YDR351W 2595 nt4.16□□□□□ -1.74
RPN11P43588 EMP70YLR083C 2004 nt4.16□□□□□ -1.74
RPN11P43588 YND1YER005W 1893 nt4.15□□□□□ -1.74
RPN11P43588 CLG1YGL215W 1359 nt4.15□□□□□ -1.74
RPN11P43588 YJR061WYJR061W 2808 nt4.15□□□□□ -1.74
RPN11P43588 FMP30YPL103C 1407 nt4.15□□□□□ -1.74
RPN11P43588 PRP18YGR006W 756 nt4.15□□□□□ -1.75
RPN11P43588 HTA2YBL003C 399 nt4.15□□□□□ -1.75
RPN11P43588 RPN2YIL075C 2838 nt4.15□□□□□ -1.75
RPN11P43588 PST1YDR055W 1335 nt4.15□□□□□ -1.75
RPN11P43588 SAD1YFR005C 1347 nt4.15□□□□□ -1.75
RPN11P43588 DSS1YMR287C 2910 nt4.15□□□□□ -1.75
RPN11P43588 ECM18YDR125C 1362 nt4.14□□□□□ -1.75
RPN11P43588 TPO2YGR138C 1845 nt4.14□□□□□ -1.75
RPN11P43588 MEF1YLR069C 2286 nt4.14□□□□□ -1.75
RPN11P43588 HAP4YKL109W 1665 nt4.14□□□□□ -1.75
RPN11P43588 RAD55YDR076W 1221 nt4.14□□□□□ -1.75
RPN11P43588 CBS2YDR197W 1170 nt4.14□□□□□ -1.75
RPN11P43588 TOS8YGL096W 831 nt4.14□□□□□ -1.75
RPN11P43588 YGR016WYGR016W 573 nt4.14□□□□□ -1.75
RPN11P43588 PRE9YGR135W 777 nt4.14□□□□□ -1.75
RPN11P43588 RTA1YGR213C 954 nt4.14□□□□□ -1.75
RPN11P43588 YUH1YJR099W 711 nt4.14□□□□□ -1.75
RPN11P43588 MMM1YLL006W 1281 nt4.14□□□□□ -1.75
RPN11P43588 INN1YNL152W 1230 nt4.14□□□□□ -1.75
RPN11P43588 PWR1PWR1 941 nt4.14□□□□□ -1.75
RPN11P43588 MED8YBR193C 672 nt4.14□□□□□ -1.75
RPN11P43588 snR44snR44 211 nt4.14□□□□□ -1.75
RPN11P43588 BCH2YKR027W 2298 nt4.14□□□□□ -1.75
RPN11P43588 NUF2YOL069W 1356 nt4.14□□□□□ -1.75
RPN11P43588 ALE1YOR175C 1860 nt4.13□□□□□ -1.75
RPN11P43588 HOM2YDR158W 1098 nt4.13□□□□□ -1.75
RPN11P43588 YPT7YML001W 627 nt4.13□□□□□ -1.75
RPN11P43588 CUZ1YNL155W 825 nt4.13□□□□□ -1.75
RPN11P43588 YNL303WYNL303W 348 nt4.13□□□□□ -1.75
RPN11P43588 MDM12YOL009C 816 nt4.13□□□□□ -1.75
RPN11P43588 YOR097CYOR097C 528 nt4.13□□□□□ -1.75
RPN11P43588 MFM1YPL060W 1242 nt4.13□□□□□ -1.75
RPN11P43588 YPR074W-AYPR074W-A 171 nt4.13□□□□□ -1.75
RPN11P43588 ART10YLR392C 1557 nt4.13□□□□□ -1.75
RPN11P43588 APN2YBL019W 1563 nt4.13□□□□□ -1.75
Retrieved 100 of 7,029 protein–RNA pairs in 62.7 ms