Protein–RNA interactions for Protein: P38789

SSF1, Ribosome biogenesis protein SSF1, yeastyeast

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSF1P38789 SRP40YKR092C 1221 nt5.65□□□□□ -1.5
SSF1P38789 RUF22RUF22 515 nt5.65□□□□□ -1.5
SSF1P38789 PPG1YNR032W 1107 nt5.65□□□□□ -1.5
SSF1P38789 snR10snR10 245 nt5.65□□□□□ -1.5
SSF1P38789 ARF3YOR094W 552 nt5.65□□□□□ -1.5
SSF1P38789 TUM1YOR251C 915 nt5.65□□□□□ -1.5
SSF1P38789 HRK1YOR267C 2280 nt5.65□□□□□ -1.51
SSF1P38789 YDR210W-AYDR210W-A 1317 nt5.65□□□□□ -1.51
SSF1P38789 DNF2YDR093W 4839 nt5.65□□□□□ -1.51
SSF1P38789 SYF1YDR416W 2580 nt5.64□□□□□ -1.51
SSF1P38789 snR56snR56 88 nt5.64□□□□□ -1.51
SSF1P38789 TVP15YDR100W 432 nt5.64□□□□□ -1.51
SSF1P38789 RSM28YDR494W 1086 nt5.64□□□□□ -1.51
SSF1P38789 RSM18YER050C 417 nt5.64□□□□□ -1.51
SSF1P38789 GIC1YHR061C 945 nt5.64□□□□□ -1.51
SSF1P38789 ECM13YBL043W 774 nt5.64□□□□□ -1.51
SSF1P38789 CST9YLR394W 1449 nt5.64□□□□□ -1.51
SSF1P38789 MAG2YLR427W 2013 nt5.64□□□□□ -1.51
SSF1P38789 RAD28YDR030C 1521 nt5.64□□□□□ -1.51
SSF1P38789 HOM3YER052C 1584 nt5.63□□□□□ -1.51
SSF1P38789 IMD2YHR216W 1572 nt5.63□□□□□ -1.51
SSF1P38789 GMC1YDR506C 1827 nt5.63□□□□□ -1.51
SSF1P38789 MSW1YDR268W 1140 nt5.63□□□□□ -1.51
SSF1P38789 YER145C-AYER145C-A 438 nt5.63□□□□□ -1.51
SSF1P38789 MND1YGL183C 660 nt5.63□□□□□ -1.51
SSF1P38789 YGR153WYGR153W 654 nt5.63□□□□□ -1.51
SSF1P38789 YGR293CYGR293C 462 nt5.63□□□□□ -1.51
SSF1P38789 YHR028W-AYHR028W-A 321 nt5.63□□□□□ -1.51
SSF1P38789 RRT1YBL048W 312 nt5.63□□□□□ -1.51
SSF1P38789 YBR300CYBR300C 498 nt5.63□□□□□ -1.51
SSF1P38789 YML020WYML020W 1995 nt5.63□□□□□ -1.51
SSF1P38789 MSC2YDR205W 2175 nt5.63□□□□□ -1.51
SSF1P38789 PFK1YGR240C 2964 nt5.63□□□□□ -1.51
SSF1P38789 UGA3YDL170W 1587 nt5.63□□□□□ -1.51
SSF1P38789 RCR2YDR003W 633 nt5.62□□□□□ -1.51
SSF1P38789 UBC13YDR092W 462 nt5.62□□□□□ -1.51
SSF1P38789 DPB4YDR121W 591 nt5.62□□□□□ -1.51
SSF1P38789 YEL067CYEL067C 588 nt5.62□□□□□ -1.51
SSF1P38789 MAG1YER142C 891 nt5.62□□□□□ -1.51
SSF1P38789 SRB5YGR104C 924 nt5.62□□□□□ -1.51
SSF1P38789 RPP0YLR340W 939 nt5.62□□□□□ -1.51
SSF1P38789 RXT2YBR095C 1293 nt5.62□□□□□ -1.51
SSF1P38789 YCL012CYCL012C 405 nt5.62□□□□□ -1.51
SSF1P38789 MTH1YDR277C 1302 nt5.62□□□□□ -1.51
SSF1P38789 GLO3YER122C 1482 nt5.62□□□□□ -1.51
SSF1P38789 SEC59YMR013C 1560 nt5.62□□□□□ -1.51
SSF1P38789 GCD1YOR260W 1737 nt5.62□□□□□ -1.51
SSF1P38789 HCA4YJL033W 2313 nt5.62□□□□□ -1.51
SSF1P38789 YGR126WYGR126W 693 nt5.61□□□□□ -1.51
SSF1P38789 MPC3YGR243W 441 nt5.61□□□□□ -1.51
SSF1P38789 KAR2YJL034W 2049 nt5.61□□□□□ -1.51
SSF1P38789 YJL133C-AYJL133C-A 225 nt5.61□□□□□ -1.51
SSF1P38789 YAL065CYAL065C 387 nt5.61□□□□□ -1.51
SSF1P38789 TFC7YOR110W 1308 nt5.61□□□□□ -1.51
SSF1P38789 RPS10AYOR293W 318 nt5.61□□□□□ -1.51
SSF1P38789 GPR1YDL035C 2886 nt5.61□□□□□ -1.51
SSF1P38789 ZPR1YGR211W 1461 nt5.6□□□□□ -1.51
SSF1P38789 KTR2YKR061W 1278 nt5.6□□□□□ -1.51
SSF1P38789 YLR050CYLR050C 486 nt5.6□□□□□ -1.51
SSF1P38789 YBL006W-AYBL006W-A 150 nt5.6□□□□□ -1.51
SSF1P38789 COG5YNL051W 1212 nt5.6□□□□□ -1.51
SSF1P38789 GSY1YFR015C 2127 nt5.6□□□□□ -1.51
SSF1P38789 APC4YDR118W 1959 nt5.6□□□□□ -1.51
SSF1P38789 TRF5YNL299W 1929 nt5.6□□□□□ -1.51
SSF1P38789 RMD6YEL072W 696 nt5.59□□□□□ -1.51
SSF1P38789 YGL082WYGL082W 1146 nt5.59□□□□□ -1.51
SSF1P38789 RNR2YJL026W 1200 nt5.59□□□□□ -1.51
SSF1P38789 ATG27YJL178C 816 nt5.59□□□□□ -1.51
SSF1P38789 TVP38YKR088C 1014 nt5.59□□□□□ -1.51
SSF1P38789 GLO1YML004C 981 nt5.59□□□□□ -1.51
SSF1P38789 RCL1YOL010W 1104 nt5.59□□□□□ -1.51
SSF1P38789 HNT3YOR258W 654 nt5.59□□□□□ -1.51
SSF1P38789 YPR172WYPR172W 603 nt5.59□□□□□ -1.51
SSF1P38789 POF1YCL047C 777 nt5.59□□□□□ -1.51
SSF1P38789 KAR4YCL055W 1008 nt5.59□□□□□ -1.51
SSF1P38789 RTC5YOR118W 1704 nt5.59□□□□□ -1.51
SSF1P38789 GIP4YAL031C 2283 nt5.59□□□□□ -1.51
SSF1P38789 NOP56YLR197W 1515 nt5.58□□□□□ -1.52
SSF1P38789 MFB1YDR219C 1398 nt5.58□□□□□ -1.52
SSF1P38789 CPS1YJL172W 1731 nt5.58□□□□□ -1.52
SSF1P38789 YDR461C-AYDR461C-A 243 nt5.58□□□□□ -1.52
SSF1P38789 LOC1YFR001W 615 nt5.58□□□□□ -1.52
SSF1P38789 MRP4YHL004W 1185 nt5.58□□□□□ -1.52
SSF1P38789 YJR020WYJR020W 333 nt5.58□□□□□ -1.52
SSF1P38789 ECI1YLR284C 843 nt5.58□□□□□ -1.52
SSF1P38789 GMC2YLR445W 567 nt5.58□□□□□ -1.52
SSF1P38789 YOR379CYOR379C 339 nt5.58□□□□□ -1.52
SSF1P38789 SRP1YNL189W 1629 nt5.58□□□□□ -1.52
SSF1P38789 STE7YDL159W 1548 nt5.58□□□□□ -1.52
SSF1P38789 PTR3YFR029W 2037 nt5.57□□□□□ -1.52
SSF1P38789 SLF1YDR515W 1344 nt5.57□□□□□ -1.52
SSF1P38789 MSE1YOL033W 1611 nt5.57□□□□□ -1.52
SSF1P38789 RVS161YCR009C 798 nt5.57□□□□□ -1.52
SSF1P38789 YIL024CYIL024C 570 nt5.57□□□□□ -1.52
SSF1P38789 YJL193WYJL193W 1209 nt5.57□□□□□ -1.52
SSF1P38789 ATP11YNL315C 957 nt5.57□□□□□ -1.52
SSF1P38789 MEI5YPL121C 669 nt5.57□□□□□ -1.52
SSF1P38789 NIP7YPL211W 546 nt5.57□□□□□ -1.52
SSF1P38789 MAK3YPR051W 531 nt5.57□□□□□ -1.52
SSF1P38789 YKL075CYKL075C 1353 nt5.56□□□□□ -1.52
Retrieved 100 of 7,029 protein–RNA pairs in 47.4 ms