Protein–RNA interactions for Protein: Q02260

SMD1, Small nuclear ribonucleoprotein Sm D1, yeastyeast

Predicted RBP Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD1Q02260 ADO1YJR105W 1023 nt7.01□□□□□ -1.29
SMD1Q02260 MAE1YKL029C 2010 nt7□□□□□ -1.29
SMD1Q02260 LSC2YGR244C 1284 nt6.99□□□□□ -1.29
SMD1Q02260 PLB1YMR008C 1995 nt6.99□□□□□ -1.29
SMD1Q02260 VPS75YNL246W 795 nt6.98□□□□□ -1.29
SMD1Q02260 TOK1YJL093C 2076 nt6.97□□□□□ -1.29
SMD1Q02260 SGT2YOR007C 1041 nt6.96□□□□□ -1.3
SMD1Q02260 PEX25YPL112C 1185 nt6.96□□□□□ -1.3
SMD1Q02260 NDI1YML120C 1542 nt6.96□□□□□ -1.3
SMD1Q02260 YNL115CYNL115C 1935 nt6.95□□□□□ -1.3
SMD1Q02260 ALD4YOR374W 1560 nt6.95□□□□□ -1.3
SMD1Q02260 TIR3YIL011W 810 nt6.93□□□□□ -1.3
SMD1Q02260 HIF1YLL022C 1158 nt6.91□□□□□ -1.3
SMD1Q02260 SAM35YHR083W 990 nt6.9□□□□□ -1.3
SMD1Q02260 GAP1YKR039W 1809 nt6.89□□□□□ -1.31
SMD1Q02260 YFR018CYFR018C 1092 nt6.88□□□□□ -1.31
SMD1Q02260 YML089CYML089C 369 nt6.88□□□□□ -1.31
SMD1Q02260 SPT20YOL148C 1815 nt6.87□□□□□ -1.31
SMD1Q02260 PRM5YIL117C 957 nt6.87□□□□□ -1.31
SMD1Q02260 UTR1YJR049C 1593 nt6.86□□□□□ -1.31
SMD1Q02260 ZRT3YKL175W 1512 nt6.86□□□□□ -1.31
SMD1Q02260 INA1YLR413W 2028 nt6.86□□□□□ -1.31
SMD1Q02260 THI72YOR192C 1800 nt6.86□□□□□ -1.31
SMD1Q02260 RIM8YGL045W 1629 nt6.84□□□□□ -1.31
SMD1Q02260 POM34YLR018C 900 nt6.84□□□□□ -1.31
SMD1Q02260 PRE6YOL038W 765 nt6.83□□□□□ -1.32
SMD1Q02260 RSC4YKR008W 1878 nt6.82□□□□□ -1.32
SMD1Q02260 YFL066CYFL066C 1179 nt6.82□□□□□ -1.32
SMD1Q02260 PRO1YDR300C 1287 nt6.8□□□□□ -1.32
SMD1Q02260 PAU7YAR020C 168 nt6.8□□□□□ -1.32
SMD1Q02260 YRF1-2YER190W 5046 nt6.8□□□□□ -1.32
SMD1Q02260 NRT1YOR071C 1797 nt6.79□□□□□ -1.32
SMD1Q02260 ACO2YJL200C 2370 nt6.79□□□□□ -1.32
SMD1Q02260 RPC82YPR190C 1965 nt6.78□□□□□ -1.32
SMD1Q02260 DBP1YPL119C 1854 nt6.77□□□□□ -1.33
SMD1Q02260 SHH4YLR164W 507 nt6.77□□□□□ -1.33
SMD1Q02260 DIF1YLR437C 402 nt6.77□□□□□ -1.33
SMD1Q02260 ATG15YCR068W 1563 nt6.77□□□□□ -1.33
SMD1Q02260 YGL114WYGL114W 2178 nt6.76□□□□□ -1.33
SMD1Q02260 YDR010CYDR010C 333 nt6.76□□□□□ -1.33
SMD1Q02260 FRA1YLL029W 2250 nt6.76□□□□□ -1.33
SMD1Q02260 RET2YFR051C 1641 nt6.76□□□□□ -1.33
SMD1Q02260 SFA1YDL168W 1161 nt6.72□□□□□ -1.33
SMD1Q02260 SHB17YKR043C 816 nt6.72□□□□□ -1.33
SMD1Q02260 HXT1YHR094C 1713 nt6.71□□□□□ -1.34
SMD1Q02260 RRT5YFR032C 870 nt6.71□□□□□ -1.34
SMD1Q02260 YHL019W-AYHL019W-A 594 nt6.7□□□□□ -1.34
SMD1Q02260 TIF6YPR016C 738 nt6.7□□□□□ -1.34
SMD1Q02260 YJL067WYJL067W 351 nt6.69□□□□□ -1.34
SMD1Q02260 MIR1YJR077C 936 nt6.69□□□□□ -1.34
SMD1Q02260 MCM5YLR274W 2328 nt6.68□□□□□ -1.34
SMD1Q02260 YDR094WYDR094W 336 nt6.68□□□□□ -1.34
SMD1Q02260 MET28YIR017C 564 nt6.68□□□□□ -1.34
SMD1Q02260 YAR028WYAR028W 705 nt6.68□□□□□ -1.34
SMD1Q02260 TOM6YOR045W 186 nt6.68□□□□□ -1.34
SMD1Q02260 HIP1YGR191W 1812 nt6.67□□□□□ -1.34
SMD1Q02260 YCR087WYCR087W 516 nt6.67□□□□□ -1.34
SMD1Q02260 UBA4YHR111W 1323 nt6.67□□□□□ -1.34
SMD1Q02260 SHY1YGR112W 1170 nt6.66□□□□□ -1.34
SMD1Q02260 URA6YKL024C 615 nt6.66□□□□□ -1.34
SMD1Q02260 ILV3YJR016C 1758 nt6.64□□□□□ -1.35
SMD1Q02260 SED1YDR077W 1017 nt6.64□□□□□ -1.35
SMD1Q02260 LIP1YMR298W 453 nt6.64□□□□□ -1.35
SMD1Q02260 FIT3YOR383C 615 nt6.64□□□□□ -1.35
SMD1Q02260 CLB6YGR109C 1143 nt6.63□□□□□ -1.35
SMD1Q02260 PHO89YBR296C 1725 nt6.63□□□□□ -1.35
SMD1Q02260 LEU9YOR108W 1815 nt6.62□□□□□ -1.35
SMD1Q02260 ALP1YNL270C 1722 nt6.62□□□□□ -1.35
SMD1Q02260 MRP20YDR405W 792 nt6.61□□□□□ -1.35
SMD1Q02260 THI74YDR438W 1113 nt6.61□□□□□ -1.35
SMD1Q02260 PEX2YJL210W 816 nt6.61□□□□□ -1.35
SMD1Q02260 UTH1YKR042W 1098 nt6.61□□□□□ -1.35
SMD1Q02260 MTG2YHR168W 1557 nt6.61□□□□□ -1.35
SMD1Q02260 YBL086CYBL086C 1401 nt6.6□□□□□ -1.35
SMD1Q02260 RPL4BYDR012W 1089 nt6.6□□□□□ -1.35
SMD1Q02260 YSR3YKR053C 1215 nt6.6□□□□□ -1.35
SMD1Q02260 COQ2YNR041C 1119 nt6.6□□□□□ -1.35
SMD1Q02260 RPL4AYBR031W 1089 nt6.6□□□□□ -1.35
SMD1Q02260 HOL1YNR055C 1761 nt6.59□□□□□ -1.35
SMD1Q02260 NSG2YNL156C 900 nt6.59□□□□□ -1.35
SMD1Q02260 UFO1YML088W 2007 nt6.57□□□□□ -1.36
SMD1Q02260 MUP1YGR055W 1725 nt6.57□□□□□ -1.36
SMD1Q02260 TOM71YHR117W 1920 nt6.57□□□□□ -1.36
SMD1Q02260 YIL100C-AYIL100C-A 339 nt6.57□□□□□ -1.36
SMD1Q02260 OPI10YOL032W 741 nt6.56□□□□□ -1.36
SMD1Q02260 SAM1YLR180W 1149 nt6.55□□□□□ -1.36
SMD1Q02260 PET8YNL003C 855 nt6.55□□□□□ -1.36
SMD1Q02260 TPN1YGL186C 1740 nt6.55□□□□□ -1.36
SMD1Q02260 MSF1YPR047W 1410 nt6.54□□□□□ -1.36
SMD1Q02260 YER190C-AYER190C-A 576 nt6.54□□□□□ -1.36
SMD1Q02260 YGR296C-AYGR296C-A 576 nt6.54□□□□□ -1.36
SMD1Q02260 YML133W-AYML133W-A 576 nt6.54□□□□□ -1.36
SMD1Q02260 NAT4YMR069W 858 nt6.54□□□□□ -1.36
SMD1Q02260 YNL339W-AYNL339W-A 576 nt6.54□□□□□ -1.36
SMD1Q02260 YPL283W-AYPL283W-A 576 nt6.54□□□□□ -1.36
SMD1Q02260 YRF1-3YGR296W 5580 nt6.54□□□□□ -1.36
SMD1Q02260 YRF1-6YNL339C 5580 nt6.54□□□□□ -1.36
SMD1Q02260 YRF1-7YPL283C 5580 nt6.54□□□□□ -1.36
SMD1Q02260 HXK1YFR053C 1458 nt6.53□□□□□ -1.36
SMD1Q02260 YLR173WYLR173W 1827 nt6.53□□□□□ -1.36
Retrieved 100 of 7,029 protein–RNA pairs in 54.2 ms