Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 YJR114WYJR114W 393 nt12.64□□□□□ -0.39
RPN11P43588 HIP1YGR191W 1812 nt12.63□□□□□ -0.39
RPN11P43588 TOM6YOR045W 186 nt12.63□□□□□ -0.39
RPN11P43588 GOR1YNL274C 1053 nt12.62□□□□□ -0.39
RPN11P43588 PEX2YJL210W 816 nt12.61□□□□□ -0.39
RPN11P43588 NRT1YOR071C 1797 nt12.61□□□□□ -0.39
RPN11P43588 RAX1YOR301W 1308 nt12.61□□□□□ -0.39
RPN11P43588 YPL222C-AYPL222C-A 246 nt12.58□□□□□ -0.4
RPN11P43588 MSB4YOL112W 1479 nt12.58□□□□□ -0.4
RPN11P43588 DUT1YBR252W 444 nt12.56□□□□□ -0.4
RPN11P43588 TIR3YIL011W 810 nt12.55□□□□□ -0.4
RPN11P43588 AAC1YMR056C 930 nt12.54□□□□□ -0.4
RPN11P43588 PGC1YPL206C 966 nt12.52□□□□□ -0.41
RPN11P43588 LOT5YKL183W 921 nt12.51□□□□□ -0.41
RPN11P43588 POM34YLR018C 900 nt12.5□□□□□ -0.41
RPN11P43588 YBR232CYBR232C 360 nt12.5□□□□□ -0.41
RPN11P43588 GND1YHR183W 1470 nt12.48□□□□□ -0.41
RPN11P43588 NBP35YGL091C 987 nt12.48□□□□□ -0.41
RPN11P43588 YJL064WYJL064W 396 nt12.48□□□□□ -0.41
RPN11P43588 MET28YIR017C 564 nt12.47□□□□□ -0.41
RPN11P43588 PAU5YFL020C 369 nt12.44□□□□□ -0.42
RPN11P43588 TIM44YIL022W 1296 nt12.44□□□□□ -0.42
RPN11P43588 TIF6YPR016C 738 nt12.44□□□□□ -0.42
RPN11P43588 PCH2YBR186W 1695 nt12.44□□□□□ -0.42
RPN11P43588 YML089CYML089C 369 nt12.42□□□□□ -0.42
RPN11P43588 BOP3YNL042W 1191 nt12.42□□□□□ -0.42
RPN11P43588 PAU19YMR325W 375 nt12.41□□□□□ -0.42
RPN11P43588 APT2YDR441C 546 nt12.4□□□□□ -0.42
RPN11P43588 SLG1YOR008C 1137 nt12.4□□□□□ -0.42
RPN11P43588 AGP1YCL025C 1902 nt12.4□□□□□ -0.42
RPN11P43588 PRO1YDR300C 1287 nt12.36□□□□□ -0.43
RPN11P43588 STP3YLR375W 1032 nt12.36□□□□□ -0.43
RPN11P43588 RIB1YBL033C 1038 nt12.36□□□□□ -0.43
RPN11P43588 FIT3YOR383C 615 nt12.35□□□□□ -0.43
RPN11P43588 GUT2YIL155C 1950 nt12.34□□□□□ -0.43
RPN11P43588 RTF1YGL244W 1677 nt12.32□□□□□ -0.44
RPN11P43588 ERG6YML008C 1152 nt12.32□□□□□ -0.44
RPN11P43588 LSC2YGR244C 1284 nt12.3□□□□□ -0.44
RPN11P43588 RIB2YOL066C 1776 nt12.3□□□□□ -0.44
RPN11P43588 BDF1YLR399C 2061 nt12.3□□□□□ -0.44
RPN11P43588 ATG15YCR068W 1563 nt12.28□□□□□ -0.44
RPN11P43588 SMM1YNR015W 1155 nt12.27□□□□□ -0.45
RPN11P43588 PIB2YGL023C 1908 nt12.25□□□□□ -0.45
RPN11P43588 LSB3YFR024C-A 1380 nt12.23□□□□□ -0.45
RPN11P43588 SOD2YHR008C 702 nt12.2□□□□□ -0.46
RPN11P43588 ALD4YOR374W 1560 nt12.2□□□□□ -0.46
RPN11P43588 CCA1YER168C 1641 nt12.19□□□□□ -0.46
RPN11P43588 YIA6YIL006W 1122 nt12.17□□□□□ -0.46
RPN11P43588 TAT1YBR069C 1860 nt12.17□□□□□ -0.46
RPN11P43588 PTK1YKL198C 1989 nt12.16□□□□□ -0.46
RPN11P43588 TIP1YBR067C 633 nt12.15□□□□□ -0.46
RPN11P43588 HXT12YIL170W 1374 nt12.13□□□□□ -0.47
RPN11P43588 FCY21YER060W 1587 nt12.12□□□□□ -0.47
RPN11P43588 AQY2YLL052C 450 nt12.1□□□□□ -0.47
RPN11P43588 ZTA1YBR046C 1005 nt12.09□□□□□ -0.47
RPN11P43588 STR3YGL184C 1398 nt12.08□□□□□ -0.48
RPN11P43588 CCT5YJR064W 1689 nt12.07□□□□□ -0.48
RPN11P43588 BMT6YLR063W 1098 nt12.07□□□□□ -0.48
RPN11P43588 QDR2YIL121W 1629 nt12.07□□□□□ -0.48
RPN11P43588 ALP1YNL270C 1722 nt12.06□□□□□ -0.48
RPN11P43588 POP2YNR052C 1302 nt12.05□□□□□ -0.48
RPN11P43588 VRG4YGL225W 1014 nt12.04□□□□□ -0.48
RPN11P43588 GAP1YKR039W 1809 nt12.04□□□□□ -0.48
RPN11P43588 YER152W-AYER152W-A 567 nt12.02□□□□□ -0.49
RPN11P43588 PRY1YJL079C 900 nt12.02□□□□□ -0.49
RPN11P43588 ARP6YLR085C 1317 nt12.02□□□□□ -0.49
RPN11P43588 RDN18-1RDN18-1 1800 nt12.02□□□□□ -0.49
RPN11P43588 RDN18-2RDN18-2 1800 nt12.02□□□□□ -0.49
RPN11P43588 YFL054CYFL054C 1941 nt12□□□□□ -0.49
RPN11P43588 AKR2YOR034C 2250 nt11.99□□□□□ -0.49
RPN11P43588 YAR028WYAR028W 705 nt11.99□□□□□ -0.49
RPN11P43588 DUS1YML080W 1272 nt11.99□□□□□ -0.49
RPN11P43588 MTG2YHR168W 1557 nt11.99□□□□□ -0.49
RPN11P43588 YJL055WYJL055W 738 nt11.96□□□□□ -0.49
RPN11P43588 PAR32YDL173W 888 nt11.95□□□□□ -0.5
RPN11P43588 TAF13YML098W 504 nt11.94□□□□□ -0.5
RPN11P43588 DIF1YLR437C 402 nt11.92□□□□□ -0.5
RPN11P43588 THI72YOR192C 1800 nt11.9□□□□□ -0.5
RPN11P43588 BUD20YLR074C 501 nt11.89□□□□□ -0.51
RPN11P43588 UGA4YDL210W 1716 nt11.87□□□□□ -0.51
RPN11P43588 YMR262WYMR262W 942 nt11.87□□□□□ -0.51
RPN11P43588 YCP4YCR004C 744 nt11.85□□□□□ -0.51
RPN11P43588 TUB4YLR212C 1422 nt11.85□□□□□ -0.51
RPN11P43588 YCL074WYCL074W 927 nt11.81□□□□□ -0.52
RPN11P43588 SWE1YJL187C 2460 nt11.8□□□□□ -0.52
RPN11P43588 Q0182Q0182 405 nt11.8□□□□□ -0.52
RPN11P43588 PLB1YMR008C 1995 nt11.79□□□□□ -0.52
RPN11P43588 KRE1YNL322C 942 nt11.79□□□□□ -0.52
RPN11P43588 HSP60YLR259C 1719 nt11.77□□□□□ -0.52
RPN11P43588 SAM50YNL026W 1455 nt11.77□□□□□ -0.52
RPN11P43588 GSF2YML048W 1212 nt11.77□□□□□ -0.53
RPN11P43588 GAL3YDR009W 1563 nt11.74□□□□□ -0.53
RPN11P43588 SNZ1YMR096W 894 nt11.73□□□□□ -0.53
RPN11P43588 CSM1YCR086W 573 nt11.7□□□□□ -0.54
RPN11P43588 RTN2YDL204W 1182 nt11.7□□□□□ -0.54
RPN11P43588 POT1YIL160C 1254 nt11.7□□□□□ -0.54
RPN11P43588 APS2YJR058C 444 nt11.7□□□□□ -0.54
RPN11P43588 MHF1YOL086W-A 273 nt11.7□□□□□ -0.54
RPN11P43588 UTR1YJR049C 1593 nt11.68□□□□□ -0.54
RPN11P43588 YER190C-AYER190C-A 576 nt11.67□□□□□ -0.54
Retrieved 100 of 7,029 protein–RNA pairs in 38.8 ms