Protein–RNA interactions for Protein: P25339

PUF4, Pumilio homology domain family member 4, yeastyeast

Known RBP RIP-Chip data

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF4P25339 PRO1YDR300C 1287 nt10.38□□□□□ -0.75
PUF4P25339 PRM5YIL117C 957 nt10.38□□□□□ -0.75
PUF4P25339 FRE6YLL051C 2139 nt10.36□□□□□ -0.75
PUF4P25339 CYT2YKL087C 675 nt10.36□□□□□ -0.75
PUF4P25339 UTR1YJR049C 1593 nt10.35□□□□□ -0.75
PUF4P25339 YHL019W-AYHL019W-A 594 nt10.34□□□□□ -0.75
PUF4P25339 POM34YLR018C 900 nt10.34□□□□□ -0.75
PUF4P25339 UBA4YHR111W 1323 nt10.33□□□□□ -0.76
PUF4P25339 MSF1YPR047W 1410 nt10.33□□□□□ -0.76
PUF4P25339 GAP1YKR039W 1809 nt10.33□□□□□ -0.76
PUF4P25339 RET2YFR051C 1641 nt10.33□□□□□ -0.76
PUF4P25339 LSC2YGR244C 1284 nt10.32□□□□□ -0.76
PUF4P25339 THI74YDR438W 1113 nt10.31□□□□□ -0.76
PUF4P25339 TOM6YOR045W 186 nt10.3□□□□□ -0.76 RIP-Chip
PUF4P25339 SSN3YPL042C 1668 nt10.3□□□□□ -0.76
PUF4P25339 PHO89YBR296C 1725 nt10.3□□□□□ -0.76
PUF4P25339 HIF1YLL022C 1158 nt10.29□□□□□ -0.76
PUF4P25339 GLR1YPL091W 1452 nt10.29□□□□□ -0.76
PUF4P25339 ATG15YCR068W 1563 nt10.26□□□□□ -0.77
PUF4P25339 YSR3YKR053C 1215 nt10.24□□□□□ -0.77 RIP-Chip
PUF4P25339 ALD4YOR374W 1560 nt10.23□□□□□ -0.77
PUF4P25339 YAT1YAR035W 2064 nt10.23□□□□□ -0.77
PUF4P25339 CSM2YIL132C 642 nt10.23□□□□□ -0.77
PUF4P25339 COQ2YNR041C 1119 nt10.23□□□□□ -0.77
PUF4P25339 RBG2YGR173W 1107 nt10.21□□□□□ -0.77
PUF4P25339 PEX2YJL210W 816 nt10.21□□□□□ -0.77
PUF4P25339 XYL2YLR070C 1071 nt10.2□□□□□ -0.78
PUF4P25339 YML089CYML089C 369 nt10.2□□□□□ -0.78
PUF4P25339 DIF1YLR437C 402 nt10.18□□□□□ -0.78
PUF4P25339 TIF6YPR016C 738 nt10.17□□□□□ -0.78 RIP-Chip
PUF4P25339 MET8YBR213W 825 nt10.17□□□□□ -0.78
PUF4P25339 HIP1YGR191W 1812 nt10.16□□□□□ -0.78 RIP-Chip
PUF4P25339 YGL034CYGL034C 366 nt10.15□□□□□ -0.78
PUF4P25339 MRP20YDR405W 792 nt10.11□□□□□ -0.79
PUF4P25339 CLB6YGR109C 1143 nt10.11□□□□□ -0.79
PUF4P25339 GID7YCL039W 2238 nt10.1□□□□□ -0.79
PUF4P25339 YCR087WYCR087W 516 nt10.09□□□□□ -0.79
PUF4P25339 SAM35YHR083W 990 nt10.09□□□□□ -0.79
PUF4P25339 AIM45YPR004C 1035 nt10.08□□□□□ -0.8
PUF4P25339 HSL7YBR133C 2484 nt10.08□□□□□ -0.8 RIP-Chip
PUF4P25339 DBP1YPL119C 1854 nt10.06□□□□□ -0.8
PUF4P25339 Q0010Q0010 387 nt10.06□□□□□ -0.8
PUF4P25339 YER190C-AYER190C-A 576 nt10.05□□□□□ -0.8
PUF4P25339 YGR296C-AYGR296C-A 576 nt10.05□□□□□ -0.8
PUF4P25339 YML133W-AYML133W-A 576 nt10.05□□□□□ -0.8
PUF4P25339 YNL339W-AYNL339W-A 576 nt10.05□□□□□ -0.8
PUF4P25339 YPL283W-AYPL283W-A 576 nt10.05□□□□□ -0.8
PUF4P25339 HEL2YDR266C 1920 nt10.04□□□□□ -0.8
PUF4P25339 MET28YIR017C 564 nt10.03□□□□□ -0.8
PUF4P25339 MET2YNL277W 1461 nt10.03□□□□□ -0.8
PUF4P25339 NRT1YOR071C 1797 nt10.02□□□□□ -0.81
PUF4P25339 RBG1YAL036C 1110 nt10.02□□□□□ -0.81
PUF4P25339 YAR028WYAR028W 705 nt10.02□□□□□ -0.81
PUF4P25339 ZTA1YBR046C 1005 nt10.02□□□□□ -0.81
PUF4P25339 NDI1YML120C 1542 nt10.02□□□□□ -0.81
PUF4P25339 HXT1YHR094C 1713 nt10.02□□□□□ -0.81
PUF4P25339 MTG2YHR168W 1557 nt10.01□□□□□ -0.81
PUF4P25339 RPL4BYDR012W 1089 nt10.01□□□□□ -0.81
PUF4P25339 RPS14BYJL191W 417 nt10.01□□□□□ -0.81
PUF4P25339 SAM1YLR180W 1149 nt10.01□□□□□ -0.81
PUF4P25339 YMR226CYMR226C 804 nt10.01□□□□□ -0.81
PUF4P25339 RPL4AYBR031W 1089 nt10.01□□□□□ -0.81
PUF4P25339 RPC82YPR190C 1965 nt10.01□□□□□ -0.81
PUF4P25339 SFP1YLR403W 2052 nt10□□□□□ -0.81
PUF4P25339 YBL086CYBL086C 1401 nt9.99□□□□□ -0.81
PUF4P25339 NPP1YCR026C 2229 nt9.99□□□□□ -0.81
PUF4P25339 UTH1YKR042W 1098 nt9.99□□□□□ -0.81
PUF4P25339 CMP2YML057W 1815 nt9.98□□□□□ -0.81
PUF4P25339 ZRT3YKL175W 1512 nt9.98□□□□□ -0.81
PUF4P25339 SHY1YGR112W 1170 nt9.97□□□□□ -0.81
PUF4P25339 YJL067WYJL067W 351 nt9.97□□□□□ -0.81
PUF4P25339 AKR2YOR034C 2250 nt9.95□□□□□ -0.82
PUF4P25339 RDN25-1RDN25-1 3396 nt9.95□□□□□ -0.82
PUF4P25339 RDN25-2RDN25-2 3396 nt9.95□□□□□ -0.82
PUF4P25339 SED1YDR077W 1017 nt9.95□□□□□ -0.82
PUF4P25339 LIP1YMR298W 453 nt9.95□□□□□ -0.82
PUF4P25339 INA1YLR413W 2028 nt9.93□□□□□ -0.82
PUF4P25339 YPL251WYPL251W 303 nt9.91□□□□□ -0.82
PUF4P25339 SPT20YOL148C 1815 nt9.89□□□□□ -0.83
PUF4P25339 YJR154WYJR154W 1041 nt9.89□□□□□ -0.83
PUF4P25339 ALP1YNL270C 1722 nt9.88□□□□□ -0.83
PUF4P25339 UFO1YML088W 2007 nt9.87□□□□□ -0.83
PUF4P25339 FIT3YOR383C 615 nt9.87□□□□□ -0.83
PUF4P25339 LEU9YOR108W 1815 nt9.86□□□□□ -0.83
PUF4P25339 PAU21YOR394W 495 nt9.85□□□□□ -0.83
PUF4P25339 PAU22YPL282C 495 nt9.85□□□□□ -0.83
PUF4P25339 BRR1YPR057W 1026 nt9.85□□□□□ -0.83
PUF4P25339 ESBP6YNL125C 2022 nt9.85□□□□□ -0.83
PUF4P25339 YLR279WYLR279W 390 nt9.84□□□□□ -0.83
PUF4P25339 BSP1YPR171W 1731 nt9.83□□□□□ -0.84
PUF4P25339 TOA2YKL058W 369 nt9.83□□□□□ -0.84
PUF4P25339 MSB4YOL112W 1479 nt9.82□□□□□ -0.84
PUF4P25339 TSC10YBR265W 963 nt9.81□□□□□ -0.84
PUF4P25339 URA6YKL024C 615 nt9.8□□□□□ -0.84
PUF4P25339 GND2YGR256W 1479 nt9.79□□□□□ -0.84
PUF4P25339 CAB5YDR196C 726 nt9.79□□□□□ -0.84
PUF4P25339 YGR012WYGR012W 1182 nt9.79□□□□□ -0.84
PUF4P25339 YMR103CYMR103C 363 nt9.79□□□□□ -0.84
PUF4P25339 UGA4YDL210W 1716 nt9.79□□□□□ -0.84
PUF4P25339 RAD51YER095W 1203 nt9.78□□□□□ -0.84
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms