Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV9A0A0B4J1U6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV9A0A0B4J1U6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TRBV9A0A0B4J1U6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV9A0A0B4J1U6 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV9A0A0B4J1U6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV9A0A0B4J1U6 ECEL1P1-201ENST00000373592 1742 ntBASIC17.46■□□□□ 0.39
TRBV9A0A0B4J1U6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.46■□□□□ 0.39
TRBV9A0A0B4J1U6 LINC01529-204ENST00000636474 1715 ntBASIC17.46■□□□□ 0.39
TRBV9A0A0B4J1U6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV9A0A0B4J1U6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV9A0A0B4J1U6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV9A0A0B4J1U6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV9A0A0B4J1U6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.46■□□□□ 0.38
TRBV9A0A0B4J1U6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.45■□□□□ 0.38
TRBV9A0A0B4J1U6 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.45■□□□□ 0.38
TRBV9A0A0B4J1U6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV9A0A0B4J1U6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.45■□□□□ 0.38
TRBV9A0A0B4J1U6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TRBV9A0A0B4J1U6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.45■□□□□ 0.38
TRBV9A0A0B4J1U6 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV9A0A0B4J1U6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV9A0A0B4J1U6 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV9A0A0B4J1U6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV9A0A0B4J1U6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TRBV9A0A0B4J1U6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV9A0A0B4J1U6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TRBV9A0A0B4J1U6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.45■□□□□ 0.38
TRBV9A0A0B4J1U6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV9A0A0B4J1U6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
TRBV9A0A0B4J1U6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
TRBV9A0A0B4J1U6 GUSBP5-202ENST00000510805 1989 ntBASIC17.44■□□□□ 0.38
TRBV9A0A0B4J1U6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.44■□□□□ 0.38
TRBV9A0A0B4J1U6 DUX4L4-201ENST00000566884 1269 ntBASIC17.44■□□□□ 0.38
TRBV9A0A0B4J1U6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.44■□□□□ 0.38
TRBV9A0A0B4J1U6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.44■□□□□ 0.38
TRBV9A0A0B4J1U6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.44■□□□□ 0.38
TRBV9A0A0B4J1U6 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.44■□□□□ 0.38
TRBV9A0A0B4J1U6 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV9A0A0B4J1U6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV9A0A0B4J1U6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.44■□□□□ 0.38
TRBV9A0A0B4J1U6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV9A0A0B4J1U6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV9A0A0B4J1U6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV9A0A0B4J1U6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TRBV9A0A0B4J1U6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TRBV9A0A0B4J1U6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.43■□□□□ 0.38
TRBV9A0A0B4J1U6 SLC25A24-204ENST00000569674 2357 ntBASIC17.43■□□□□ 0.38
TRBV9A0A0B4J1U6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV9A0A0B4J1U6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV9A0A0B4J1U6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV9A0A0B4J1U6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.43■□□□□ 0.38
TRBV9A0A0B4J1U6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.43■□□□□ 0.38
TRBV9A0A0B4J1U6 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV9A0A0B4J1U6 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV9A0A0B4J1U6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV9A0A0B4J1U6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.43■□□□□ 0.38
TRBV9A0A0B4J1U6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRBV9A0A0B4J1U6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV9A0A0B4J1U6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.43■□□□□ 0.38
TRBV9A0A0B4J1U6 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV9A0A0B4J1U6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TRBV9A0A0B4J1U6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV9A0A0B4J1U6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TRBV9A0A0B4J1U6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.42■□□□□ 0.38
TRBV9A0A0B4J1U6 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV9A0A0B4J1U6 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV9A0A0B4J1U6 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV9A0A0B4J1U6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.42■□□□□ 0.38
TRBV9A0A0B4J1U6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
TRBV9A0A0B4J1U6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.42■□□□□ 0.38
TRBV9A0A0B4J1U6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.42■□□□□ 0.38
TRBV9A0A0B4J1U6 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV9A0A0B4J1U6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV9A0A0B4J1U6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
TRBV9A0A0B4J1U6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV9A0A0B4J1U6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.42■□□□□ 0.38
TRBV9A0A0B4J1U6 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV9A0A0B4J1U6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.41■□□□□ 0.38
TRBV9A0A0B4J1U6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV9A0A0B4J1U6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TRBV9A0A0B4J1U6 AC007375.3-201ENST00000600936 2314 ntBASIC17.41■□□□□ 0.38
TRBV9A0A0B4J1U6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV9A0A0B4J1U6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV9A0A0B4J1U6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV9A0A0B4J1U6 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV9A0A0B4J1U6 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV9A0A0B4J1U6 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV9A0A0B4J1U6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV9A0A0B4J1U6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV9A0A0B4J1U6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV9A0A0B4J1U6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.41■□□□□ 0.38
TRBV9A0A0B4J1U6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV9A0A0B4J1U6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.4■□□□□ 0.38
TRBV9A0A0B4J1U6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV9A0A0B4J1U6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV9A0A0B4J1U6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV9A0A0B4J1U6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.4■□□□□ 0.38
TRBV9A0A0B4J1U6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV9A0A0B4J1U6 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms