Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
LINC01555Q8NAE3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LINC01555Q8NAE3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
LINC01555Q8NAE3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
LINC01555Q8NAE3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.33■■□□□ 1.01
LINC01555Q8NAE3 AC008764.7-201ENST00000593779 1081 ntBASIC21.33■■□□□ 1.01
LINC01555Q8NAE3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LINC01555Q8NAE3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LINC01555Q8NAE3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.33■■□□□ 1
LINC01555Q8NAE3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.32■■□□□ 1
LINC01555Q8NAE3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
LINC01555Q8NAE3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.32■■□□□ 1
LINC01555Q8NAE3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.32■■□□□ 1
LINC01555Q8NAE3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.32■■□□□ 1
LINC01555Q8NAE3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LINC01555Q8NAE3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.32■■□□□ 1
LINC01555Q8NAE3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.32■■□□□ 1
LINC01555Q8NAE3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.32■■□□□ 1
LINC01555Q8NAE3 AC142381.2-201ENST00000566120 298 ntBASIC21.32■■□□□ 1
LINC01555Q8NAE3 AC233992.3-201ENST00000607491 485 ntBASIC21.32■■□□□ 1
LINC01555Q8NAE3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.32■■□□□ 1
LINC01555Q8NAE3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
LINC01555Q8NAE3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.32■■□□□ 1
LINC01555Q8NAE3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.32■■□□□ 1
LINC01555Q8NAE3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.32■■□□□ 1
LINC01555Q8NAE3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.32■■□□□ 1
LINC01555Q8NAE3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.31■■□□□ 1
LINC01555Q8NAE3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
LINC01555Q8NAE3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LINC01555Q8NAE3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LINC01555Q8NAE3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
LINC01555Q8NAE3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.31■■□□□ 1
LINC01555Q8NAE3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
LINC01555Q8NAE3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LINC01555Q8NAE3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.31■■□□□ 1
LINC01555Q8NAE3 AC027682.1-201ENST00000562846 899 ntBASIC21.31■■□□□ 1
LINC01555Q8NAE3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.31■■□□□ 1
LINC01555Q8NAE3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
LINC01555Q8NAE3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LINC01555Q8NAE3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
LINC01555Q8NAE3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.31■■□□□ 1
LINC01555Q8NAE3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
LINC01555Q8NAE3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LINC01555Q8NAE3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LINC01555Q8NAE3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.3■■□□□ 1
LINC01555Q8NAE3 AC099791.1-201ENST00000416440 715 ntBASIC21.3■■□□□ 1
LINC01555Q8NAE3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.3■■□□□ 1
LINC01555Q8NAE3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.3■■□□□ 1
LINC01555Q8NAE3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LINC01555Q8NAE3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LINC01555Q8NAE3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LINC01555Q8NAE3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.29■■□□□ 1
LINC01555Q8NAE3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
LINC01555Q8NAE3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LINC01555Q8NAE3 AC091305.1-201ENST00000479476 895 ntBASIC21.29■■□□□ 1
LINC01555Q8NAE3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.29■■□□□ 1
LINC01555Q8NAE3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.29■■□□□ 1
LINC01555Q8NAE3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
LINC01555Q8NAE3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.29■■□□□ 1
LINC01555Q8NAE3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
LINC01555Q8NAE3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.29■■□□□ 1
LINC01555Q8NAE3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LINC01555Q8NAE3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.28■■□□□ 1
LINC01555Q8NAE3 RASA4CP-201ENST00000424092 1398 ntBASIC21.28■■□□□ 1
LINC01555Q8NAE3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LINC01555Q8NAE3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.28■■□□□ 1
LINC01555Q8NAE3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LINC01555Q8NAE3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.28■■□□□ 1
LINC01555Q8NAE3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
LINC01555Q8NAE3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LINC01555Q8NAE3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.28■■□□□ 1
LINC01555Q8NAE3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
LINC01555Q8NAE3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LINC01555Q8NAE3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.27■■□□□ 1
LINC01555Q8NAE3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.27■■□□□ 1
LINC01555Q8NAE3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.27■■□□□ 1
LINC01555Q8NAE3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
LINC01555Q8NAE3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LINC01555Q8NAE3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LINC01555Q8NAE3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
LINC01555Q8NAE3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.27■■□□□ 1
LINC01555Q8NAE3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.27■■□□□ 1
LINC01555Q8NAE3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LINC01555Q8NAE3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LINC01555Q8NAE3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
LINC01555Q8NAE3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
LINC01555Q8NAE3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LINC01555Q8NAE3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
LINC01555Q8NAE3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.26■□□□□ 0.99
LINC01555Q8NAE3 CA15P2-201ENST00000611168 834 ntBASIC21.26■□□□□ 0.99
LINC01555Q8NAE3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.26■□□□□ 0.99
LINC01555Q8NAE3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
LINC01555Q8NAE3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LINC01555Q8NAE3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
LINC01555Q8NAE3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LINC01555Q8NAE3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
LINC01555Q8NAE3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.26■□□□□ 0.99
LINC01555Q8NAE3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
LINC01555Q8NAE3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.25■□□□□ 0.99
LINC01555Q8NAE3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms