Protein–RNA interactions for Protein: Q53R12

TM4SF20, Transmembrane 4 L6 family member 20, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF20Q53R12 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
TM4SF20Q53R12 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TM4SF20Q53R12 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TM4SF20Q53R12 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TM4SF20Q53R12 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TM4SF20Q53R12 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TM4SF20Q53R12 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TM4SF20Q53R12 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.09■□□□□ 0.33
TM4SF20Q53R12 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.09■□□□□ 0.33
TM4SF20Q53R12 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TM4SF20Q53R12 AL353803.4-201ENST00000565882 1934 ntBASIC17.09■□□□□ 0.33
TM4SF20Q53R12 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.09■□□□□ 0.33
TM4SF20Q53R12 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TM4SF20Q53R12 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TM4SF20Q53R12 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TM4SF20Q53R12 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TM4SF20Q53R12 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TM4SF20Q53R12 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TM4SF20Q53R12 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TM4SF20Q53R12 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.08■□□□□ 0.32
TM4SF20Q53R12 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TM4SF20Q53R12 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.08■□□□□ 0.32
TM4SF20Q53R12 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
TM4SF20Q53R12 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.08■□□□□ 0.32
TM4SF20Q53R12 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.08■□□□□ 0.32
TM4SF20Q53R12 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
TM4SF20Q53R12 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
TM4SF20Q53R12 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TM4SF20Q53R12 AL512631.2-201ENST00000604634 923 ntBASIC17.08■□□□□ 0.32
TM4SF20Q53R12 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TM4SF20Q53R12 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TM4SF20Q53R12 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TM4SF20Q53R12 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TM4SF20Q53R12 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TM4SF20Q53R12 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TM4SF20Q53R12 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.07■□□□□ 0.32
TM4SF20Q53R12 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TM4SF20Q53R12 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TM4SF20Q53R12 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.07■□□□□ 0.32
TM4SF20Q53R12 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TM4SF20Q53R12 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TM4SF20Q53R12 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.07■□□□□ 0.32
TM4SF20Q53R12 AC131281.2-201ENST00000520478 145 ntBASIC17.07■□□□□ 0.32
TM4SF20Q53R12 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.07■□□□□ 0.32
TM4SF20Q53R12 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.07■□□□□ 0.32
TM4SF20Q53R12 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.07■□□□□ 0.32
TM4SF20Q53R12 MIR4466-201ENST00000606121 54 ntBASIC17.07■□□□□ 0.32
TM4SF20Q53R12 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TM4SF20Q53R12 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.07■□□□□ 0.32
TM4SF20Q53R12 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.07■□□□□ 0.32
TM4SF20Q53R12 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TM4SF20Q53R12 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TM4SF20Q53R12 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TM4SF20Q53R12 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TM4SF20Q53R12 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TM4SF20Q53R12 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TM4SF20Q53R12 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TM4SF20Q53R12 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.06■□□□□ 0.32
TM4SF20Q53R12 LINC01529-204ENST00000636474 1715 ntBASIC17.06■□□□□ 0.32
TM4SF20Q53R12 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TM4SF20Q53R12 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TM4SF20Q53R12 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TM4SF20Q53R12 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TM4SF20Q53R12 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TM4SF20Q53R12 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TM4SF20Q53R12 FP325331.1-202ENST00000623531 1380 ntBASIC17.05■□□□□ 0.32
TM4SF20Q53R12 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TM4SF20Q53R12 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TM4SF20Q53R12 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TM4SF20Q53R12 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TM4SF20Q53R12 SRD5A1P1-201ENST00000442297 786 ntBASIC17.05■□□□□ 0.32
TM4SF20Q53R12 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.05■□□□□ 0.32
TM4SF20Q53R12 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TM4SF20Q53R12 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TM4SF20Q53R12 C9orf163-202ENST00000624034 2573 ntBASIC17.05■□□□□ 0.32
TM4SF20Q53R12 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TM4SF20Q53R12 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.05■□□□□ 0.32
TM4SF20Q53R12 DUSP8P3-201ENST00000399571 1760 ntBASIC17.05■□□□□ 0.32
TM4SF20Q53R12 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.05■□□□□ 0.32
TM4SF20Q53R12 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TM4SF20Q53R12 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.04■□□□□ 0.32
TM4SF20Q53R12 AC008406.3-201ENST00000620001 1374 ntBASIC17.04■□□□□ 0.32
TM4SF20Q53R12 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TM4SF20Q53R12 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TM4SF20Q53R12 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.04■□□□□ 0.32
TM4SF20Q53R12 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.04■□□□□ 0.32
TM4SF20Q53R12 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
TM4SF20Q53R12 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TM4SF20Q53R12 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TM4SF20Q53R12 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.04■□□□□ 0.32
TM4SF20Q53R12 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.04■□□□□ 0.32
TM4SF20Q53R12 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.04■□□□□ 0.32
TM4SF20Q53R12 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.04■□□□□ 0.32
TM4SF20Q53R12 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TM4SF20Q53R12 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.04■□□□□ 0.32
TM4SF20Q53R12 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TM4SF20Q53R12 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TM4SF20Q53R12 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TM4SF20Q53R12 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TM4SF20Q53R12 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms