Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 VPS53YJL029C 2469 nt4.78□□□□□ -1.64
RPN11P43588 PCL8YPL219W 1479 nt4.78□□□□□ -1.64
RPN11P43588 COS4YFL062W 1140 nt4.78□□□□□ -1.64
RPN11P43588 CIR1YGR207C 786 nt4.78□□□□□ -1.64
RPN11P43588 TIS11YLR136C 858 nt4.78□□□□□ -1.64
RPN11P43588 SPO20YMR017W 1194 nt4.78□□□□□ -1.64
RPN11P43588 SIR1YKR101W 1965 nt4.78□□□□□ -1.64
RPN11P43588 PAL1YDR348C 1500 nt4.77□□□□□ -1.65
RPN11P43588 snR63snR63 255 nt4.77□□□□□ -1.65
RPN11P43588 VPS71YML041C 843 nt4.77□□□□□ -1.65
RPN11P43588 RSF2YJR127C 4143 nt4.77□□□□□ -1.65
RPN11P43588 CNA1YLR433C 1662 nt4.77□□□□□ -1.65
RPN11P43588 SLM5YCR024C 1479 nt4.76□□□□□ -1.65
RPN11P43588 tK(CUU)CtK(CUU)C 73 nt4.76□□□□□ -1.65
RPN11P43588 tK(CUU)D1tK(CUU)D1 73 nt4.76□□□□□ -1.65
RPN11P43588 tK(CUU)D2tK(CUU)D2 73 nt4.76□□□□□ -1.65
RPN11P43588 tK(CUU)E1tK(CUU)E1 73 nt4.76□□□□□ -1.65
RPN11P43588 tK(CUU)E2tK(CUU)E2 73 nt4.76□□□□□ -1.65
RPN11P43588 tK(CUU)FtK(CUU)F 73 nt4.76□□□□□ -1.65
RPN11P43588 tK(CUU)G1tK(CUU)G1 73 nt4.76□□□□□ -1.65
RPN11P43588 tK(CUU)G2tK(CUU)G2 73 nt4.76□□□□□ -1.65
RPN11P43588 tK(CUU)G3tK(CUU)G3 73 nt4.76□□□□□ -1.65
RPN11P43588 tK(CUU)ItK(CUU)I 73 nt4.76□□□□□ -1.65
RPN11P43588 tK(CUU)JtK(CUU)J 73 nt4.76□□□□□ -1.65
RPN11P43588 tK(CUU)KtK(CUU)K 73 nt4.76□□□□□ -1.65
RPN11P43588 tK(CUU)MtK(CUU)M 73 nt4.76□□□□□ -1.65
RPN11P43588 tK(CUU)PtK(CUU)P 73 nt4.76□□□□□ -1.65
RPN11P43588 ARN2YHL047C 1863 nt4.76□□□□□ -1.65
RPN11P43588 YLR311CYLR311C 348 nt4.76□□□□□ -1.65
RPN11P43588 URA4YLR420W 1095 nt4.76□□□□□ -1.65
RPN11P43588 COS3YML132W 1140 nt4.76□□□□□ -1.65
RPN11P43588 NRM1YNR009W 750 nt4.76□□□□□ -1.65
RPN11P43588 YOL038C-AYOL038C-A 96 nt4.76□□□□□ -1.65
RPN11P43588 RIB4YOL143C 510 nt4.76□□□□□ -1.65
RPN11P43588 COS2YBR302C 1140 nt4.76□□□□□ -1.65
RPN11P43588 PUS9YDL036C 1389 nt4.76□□□□□ -1.65
RPN11P43588 YHR177WYHR177W 1362 nt4.76□□□□□ -1.65
RPN11P43588 KCH1YJR054W 1494 nt4.75□□□□□ -1.65
RPN11P43588 PCL2YDL127W 927 nt4.75□□□□□ -1.65
RPN11P43588 OKP1YGR179C 1221 nt4.75□□□□□ -1.65
RPN11P43588 TDA8YAL064C-A 381 nt4.75□□□□□ -1.65
RPN11P43588 SKP2YNL311C 2292 nt4.75□□□□□ -1.65
RPN11P43588 SEO1YAL067C 1782 nt4.74□□□□□ -1.65
RPN11P43588 NGL2YMR285C 1548 nt4.74□□□□□ -1.65
RPN11P43588 YDL026WYDL026W 312 nt4.74□□□□□ -1.65
RPN11P43588 YDR222WYDR222W 1248 nt4.74□□□□□ -1.65
RPN11P43588 ELF1YKL160W 438 nt4.74□□□□□ -1.65
RPN11P43588 PSY3YLR376C 729 nt4.74□□□□□ -1.65
RPN11P43588 YMR130WYMR130W 909 nt4.74□□□□□ -1.65
RPN11P43588 CTL1YMR180C 963 nt4.74□□□□□ -1.65
RPN11P43588 RPS19AYOL121C 435 nt4.74□□□□□ -1.65
RPN11P43588 YOR073W-AYOR073W-A 234 nt4.74□□□□□ -1.65
RPN11P43588 SSP2YOR242C 1116 nt4.74□□□□□ -1.65
RPN11P43588 MPD1YOR288C 957 nt4.74□□□□□ -1.65
RPN11P43588 AME1YBR211C 975 nt4.74□□□□□ -1.65
RPN11P43588 AXL2YIL140W 2472 nt4.74□□□□□ -1.65
RPN11P43588 ARG4YHR018C 1392 nt4.74□□□□□ -1.65
RPN11P43588 TMN2YDR107C 2019 nt4.73□□□□□ -1.65
RPN11P43588 BUD14YAR014C 2130 nt4.73□□□□□ -1.65
RPN11P43588 RKM2YDR198C 1440 nt4.73□□□□□ -1.65
RPN11P43588 BLM10YFL007W 6432 nt4.73□□□□□ -1.65
RPN11P43588 HRK1YOR267C 2280 nt4.73□□□□□ -1.65
RPN11P43588 YDR336WYDR336W 945 nt4.73□□□□□ -1.65
RPN11P43588 MAG1YER142C 891 nt4.73□□□□□ -1.65
RPN11P43588 YAL064W-BYAL064W-B 381 nt4.73□□□□□ -1.65
RPN11P43588 AHP1YLR109W 531 nt4.73□□□□□ -1.65
RPN11P43588 IMP2YMR035W 534 nt4.73□□□□□ -1.65
RPN11P43588 CAT5YOR125C 702 nt4.73□□□□□ -1.65
RPN11P43588 FDH1YOR388C 1131 nt4.73□□□□□ -1.65
RPN11P43588 ARC40YBR234C 1155 nt4.73□□□□□ -1.65
RPN11P43588 NUG1YER006W 1563 nt4.73□□□□□ -1.65
RPN11P43588 CHK1YBR274W 1584 nt4.73□□□□□ -1.65
RPN11P43588 RAD53YPL153C 2466 nt4.72□□□□□ -1.65
RPN11P43588 BUD30YDL151C 582 nt4.72□□□□□ -1.65
RPN11P43588 RRP17YDR412W 708 nt4.72□□□□□ -1.65
RPN11P43588 SMA1YPL027W 738 nt4.72□□□□□ -1.65
RPN11P43588 SRB6YBR253W 366 nt4.72□□□□□ -1.65
RPN11P43588 ALG9YNL219C 1668 nt4.72□□□□□ -1.65
RPN11P43588 PHO90YJL198W 2646 nt4.72□□□□□ -1.65
RPN11P43588 TCM62YBR044C 1719 nt4.72□□□□□ -1.65
RPN11P43588 MMT1YMR177W 1533 nt4.72□□□□□ -1.65
RPN11P43588 AFT1YGL071W 2073 nt4.71□□□□□ -1.65
RPN11P43588 YER138W-AYER138W-A 105 nt4.71□□□□□ -1.66
RPN11P43588 YBL036CYBL036C 774 nt4.71□□□□□ -1.66
RPN11P43588 IMP4YNL075W 873 nt4.71□□□□□ -1.66
RPN11P43588 AAH1YNL141W 1044 nt4.71□□□□□ -1.66
RPN11P43588 YBL107W-AYBL107W-A 105 nt4.71□□□□□ -1.66
RPN11P43588 YOL166CYOL166C 339 nt4.71□□□□□ -1.66
RPN11P43588 EFM2YBR271W 1260 nt4.71□□□□□ -1.66
RPN11P43588 FPK1YNR047W 2682 nt4.71□□□□□ -1.66
RPN11P43588 RGP1YDR137W 1992 nt4.71□□□□□ -1.66
RPN11P43588 DBF4YDR052C 2115 nt4.7□□□□□ -1.66
RPN11P43588 MET4YNL103W 2019 nt4.7□□□□□ -1.66
RPN11P43588 THI13YDL244W 1023 nt4.7□□□□□ -1.66
RPN11P43588 THI11YJR156C 1023 nt4.7□□□□□ -1.66
RPN11P43588 YKL071WYKL071W 771 nt4.7□□□□□ -1.66
RPN11P43588 TVP38YKR088C 1014 nt4.7□□□□□ -1.66
RPN11P43588 MRPS8YMR158W 468 nt4.7□□□□□ -1.66
RPN11P43588 snR32snR32 188 nt4.7□□□□□ -1.66
RPN11P43588 YDR261C-DYDR261C-D 4815 nt4.7□□□□□ -1.66
Retrieved 100 of 7,029 protein–RNA pairs in 35.6 ms