Protein–RNA interactions for Protein: O60869

EDF1, Endothelial differentiation-related factor 1, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1O60869 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.73■■□□□ 1.07
EDF1O60869 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
EDF1O60869 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.73■■□□□ 1.07
EDF1O60869 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.73■■□□□ 1.07
EDF1O60869 GPX1-201ENST00000419349 1106 ntBASIC21.73■■□□□ 1.07
EDF1O60869 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
EDF1O60869 AL592293.1-201ENST00000502889 1188 ntBASIC21.73■■□□□ 1.07
EDF1O60869 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.73■■□□□ 1.07
EDF1O60869 MIR6765-201ENST00000614092 87 ntBASIC21.73■■□□□ 1.07
EDF1O60869 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.73■■□□□ 1.07
EDF1O60869 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EDF1O60869 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EDF1O60869 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.73■■□□□ 1.07
EDF1O60869 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
EDF1O60869 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
EDF1O60869 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EDF1O60869 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EDF1O60869 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EDF1O60869 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
EDF1O60869 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EDF1O60869 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
EDF1O60869 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EDF1O60869 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
EDF1O60869 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EDF1O60869 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
EDF1O60869 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.72■■□□□ 1.07
EDF1O60869 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
EDF1O60869 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
EDF1O60869 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.72■■□□□ 1.07
EDF1O60869 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EDF1O60869 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EDF1O60869 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
EDF1O60869 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
EDF1O60869 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
EDF1O60869 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
EDF1O60869 PKD1P6-201ENST00000343738 4769 ntBASIC21.71■■□□□ 1.07
EDF1O60869 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.71■■□□□ 1.07
EDF1O60869 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
EDF1O60869 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.71■■□□□ 1.07
EDF1O60869 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
EDF1O60869 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
EDF1O60869 AC244015.2-201ENST00000616358 1861 ntBASIC21.71■■□□□ 1.07
EDF1O60869 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
EDF1O60869 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
EDF1O60869 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
EDF1O60869 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
EDF1O60869 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
EDF1O60869 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
EDF1O60869 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
EDF1O60869 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
EDF1O60869 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
EDF1O60869 AC144652.1-201ENST00000609974 1624 ntBASIC21.69■■□□□ 1.06
EDF1O60869 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
EDF1O60869 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.69■■□□□ 1.06
EDF1O60869 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.69■■□□□ 1.06
EDF1O60869 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
EDF1O60869 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.69■■□□□ 1.06
EDF1O60869 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
EDF1O60869 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
EDF1O60869 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.69■■□□□ 1.06
EDF1O60869 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.69■■□□□ 1.06
EDF1O60869 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
EDF1O60869 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.69■■□□□ 1.06
EDF1O60869 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
EDF1O60869 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
EDF1O60869 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
EDF1O60869 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
EDF1O60869 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
EDF1O60869 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.68■■□□□ 1.06
EDF1O60869 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.68■■□□□ 1.06
EDF1O60869 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
EDF1O60869 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
EDF1O60869 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
EDF1O60869 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.68■■□□□ 1.06
EDF1O60869 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
EDF1O60869 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
EDF1O60869 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
EDF1O60869 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
EDF1O60869 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
EDF1O60869 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
EDF1O60869 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.67■■□□□ 1.06
EDF1O60869 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
EDF1O60869 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
EDF1O60869 DUX4L9-201ENST00000449051 1259 ntBASIC21.67■■□□□ 1.06
EDF1O60869 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
EDF1O60869 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.67■■□□□ 1.06
EDF1O60869 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
EDF1O60869 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
EDF1O60869 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.67■■□□□ 1.06
EDF1O60869 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.67■■□□□ 1.06
EDF1O60869 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
EDF1O60869 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EDF1O60869 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.66■■□□□ 1.06
EDF1O60869 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EDF1O60869 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
EDF1O60869 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EDF1O60869 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EDF1O60869 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
EDF1O60869 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EDF1O60869 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms