Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
POLR2J3Q9H1A7 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.43■□□□□ 0.86
POLR2J3Q9H1A7 AC005703.6-201ENST00000623265 1329 ntBASIC20.43■□□□□ 0.86
POLR2J3Q9H1A7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
POLR2J3Q9H1A7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
POLR2J3Q9H1A7 AC021242.3-201ENST00000607598 1377 ntBASIC20.43■□□□□ 0.86
POLR2J3Q9H1A7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
POLR2J3Q9H1A7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
POLR2J3Q9H1A7 KRT8P33-201ENST00000508125 1423 ntBASIC20.43■□□□□ 0.86
POLR2J3Q9H1A7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.43■□□□□ 0.86
POLR2J3Q9H1A7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.42■□□□□ 0.86
POLR2J3Q9H1A7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.42■□□□□ 0.86
POLR2J3Q9H1A7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
POLR2J3Q9H1A7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
POLR2J3Q9H1A7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
POLR2J3Q9H1A7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.42■□□□□ 0.86
POLR2J3Q9H1A7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
POLR2J3Q9H1A7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
POLR2J3Q9H1A7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
POLR2J3Q9H1A7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
POLR2J3Q9H1A7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
POLR2J3Q9H1A7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
POLR2J3Q9H1A7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.41■□□□□ 0.86
POLR2J3Q9H1A7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
POLR2J3Q9H1A7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
POLR2J3Q9H1A7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
POLR2J3Q9H1A7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
POLR2J3Q9H1A7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
POLR2J3Q9H1A7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.41■□□□□ 0.86
POLR2J3Q9H1A7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.41■□□□□ 0.86
POLR2J3Q9H1A7 FP325331.1-202ENST00000623531 1380 ntBASIC20.41■□□□□ 0.86
POLR2J3Q9H1A7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
POLR2J3Q9H1A7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
POLR2J3Q9H1A7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
POLR2J3Q9H1A7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.41■□□□□ 0.86
POLR2J3Q9H1A7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
POLR2J3Q9H1A7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
POLR2J3Q9H1A7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
POLR2J3Q9H1A7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
POLR2J3Q9H1A7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
POLR2J3Q9H1A7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
POLR2J3Q9H1A7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
POLR2J3Q9H1A7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
POLR2J3Q9H1A7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
POLR2J3Q9H1A7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
POLR2J3Q9H1A7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
POLR2J3Q9H1A7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
POLR2J3Q9H1A7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
POLR2J3Q9H1A7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
POLR2J3Q9H1A7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
POLR2J3Q9H1A7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.39■□□□□ 0.85
POLR2J3Q9H1A7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
POLR2J3Q9H1A7 BX664725.1-201ENST00000438252 379 ntBASIC20.39■□□□□ 0.85
POLR2J3Q9H1A7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
POLR2J3Q9H1A7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
POLR2J3Q9H1A7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.39■□□□□ 0.85
POLR2J3Q9H1A7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
POLR2J3Q9H1A7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
POLR2J3Q9H1A7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
POLR2J3Q9H1A7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
POLR2J3Q9H1A7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.39■□□□□ 0.85
POLR2J3Q9H1A7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
POLR2J3Q9H1A7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
POLR2J3Q9H1A7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
POLR2J3Q9H1A7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
POLR2J3Q9H1A7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
POLR2J3Q9H1A7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
POLR2J3Q9H1A7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.38■□□□□ 0.85
POLR2J3Q9H1A7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
POLR2J3Q9H1A7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.38■□□□□ 0.85
POLR2J3Q9H1A7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
POLR2J3Q9H1A7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
POLR2J3Q9H1A7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
POLR2J3Q9H1A7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
POLR2J3Q9H1A7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
POLR2J3Q9H1A7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
POLR2J3Q9H1A7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.37■□□□□ 0.85
POLR2J3Q9H1A7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
POLR2J3Q9H1A7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
POLR2J3Q9H1A7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.37■□□□□ 0.85
POLR2J3Q9H1A7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.37■□□□□ 0.85
POLR2J3Q9H1A7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
POLR2J3Q9H1A7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.37■□□□□ 0.85
POLR2J3Q9H1A7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
POLR2J3Q9H1A7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
POLR2J3Q9H1A7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
POLR2J3Q9H1A7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
POLR2J3Q9H1A7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.36■□□□□ 0.85
POLR2J3Q9H1A7 LINC01529-204ENST00000636474 1715 ntBASIC20.36■□□□□ 0.85
POLR2J3Q9H1A7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.36■□□□□ 0.85
POLR2J3Q9H1A7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
POLR2J3Q9H1A7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
POLR2J3Q9H1A7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
POLR2J3Q9H1A7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
POLR2J3Q9H1A7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
POLR2J3Q9H1A7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
POLR2J3Q9H1A7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
POLR2J3Q9H1A7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
POLR2J3Q9H1A7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.35■□□□□ 0.85
POLR2J3Q9H1A7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms