Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.31■■□□□ 1
LINGO3P0C6S8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.31■■□□□ 1
LINGO3P0C6S8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
LINGO3P0C6S8 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LINGO3P0C6S8 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
LINGO3P0C6S8 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.31■■□□□ 1
LINGO3P0C6S8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.31■■□□□ 1
LINGO3P0C6S8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
LINGO3P0C6S8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LINGO3P0C6S8 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.3■■□□□ 1
LINGO3P0C6S8 AC090877.2-201ENST00000558441 1738 ntBASIC21.3■■□□□ 1
LINGO3P0C6S8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.3■■□□□ 1
LINGO3P0C6S8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.3■■□□□ 1
LINGO3P0C6S8 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.3■■□□□ 1
LINGO3P0C6S8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.3■■□□□ 1
LINGO3P0C6S8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
LINGO3P0C6S8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LINGO3P0C6S8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.3■■□□□ 1
LINGO3P0C6S8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.29■■□□□ 1
LINGO3P0C6S8 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.29■■□□□ 1
LINGO3P0C6S8 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.29■■□□□ 1
LINGO3P0C6S8 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.29■■□□□ 1
LINGO3P0C6S8 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LINGO3P0C6S8 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LINGO3P0C6S8 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
LINGO3P0C6S8 HLA-L-211ENST00000482052 1765 ntBASIC21.29■■□□□ 1
LINGO3P0C6S8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.29■■□□□ 1
LINGO3P0C6S8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LINGO3P0C6S8 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.29■■□□□ 1
LINGO3P0C6S8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LINGO3P0C6S8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.29■■□□□ 1
LINGO3P0C6S8 AC242852.2-201ENST00000615738 1807 ntBASIC21.29■■□□□ 1
LINGO3P0C6S8 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.29■■□□□ 1
LINGO3P0C6S8 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
LINGO3P0C6S8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.28■■□□□ 1
LINGO3P0C6S8 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.28■■□□□ 1
LINGO3P0C6S8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
LINGO3P0C6S8 FBXW4P1-201ENST00000426721 2239 ntBASIC21.28■■□□□ 1
LINGO3P0C6S8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.28■■□□□ 1
LINGO3P0C6S8 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
LINGO3P0C6S8 KRT8P33-201ENST00000508125 1423 ntBASIC21.28■■□□□ 1
LINGO3P0C6S8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.28■■□□□ 1
LINGO3P0C6S8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LINGO3P0C6S8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LINGO3P0C6S8 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LINGO3P0C6S8 AC026310.3-201ENST00000625186 2373 ntBASIC21.27■■□□□ 1
LINGO3P0C6S8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
LINGO3P0C6S8 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
LINGO3P0C6S8 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.27■□□□□ 0.99
LINGO3P0C6S8 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.26■□□□□ 0.99
LINGO3P0C6S8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LINGO3P0C6S8 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.26■□□□□ 0.99
LINGO3P0C6S8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.26■□□□□ 0.99
LINGO3P0C6S8 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.26■□□□□ 0.99
LINGO3P0C6S8 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LINGO3P0C6S8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.26■□□□□ 0.99
LINGO3P0C6S8 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
LINGO3P0C6S8 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LINGO3P0C6S8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LINGO3P0C6S8 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.25■□□□□ 0.99
LINGO3P0C6S8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LINGO3P0C6S8 YBX1P4-201ENST00000392794 808 ntBASIC21.25■□□□□ 0.99
LINGO3P0C6S8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.25■□□□□ 0.99
LINGO3P0C6S8 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LINGO3P0C6S8 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
LINGO3P0C6S8 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LINGO3P0C6S8 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
LINGO3P0C6S8 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LINGO3P0C6S8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LINGO3P0C6S8 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LINGO3P0C6S8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.24■□□□□ 0.99
LINGO3P0C6S8 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.24■□□□□ 0.99
LINGO3P0C6S8 AC011551.1-201ENST00000614101 683 ntBASIC21.24■□□□□ 0.99
LINGO3P0C6S8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LINGO3P0C6S8 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.24■□□□□ 0.99
LINGO3P0C6S8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
LINGO3P0C6S8 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LINGO3P0C6S8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
LINGO3P0C6S8 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
LINGO3P0C6S8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
LINGO3P0C6S8 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.23■□□□□ 0.99
LINGO3P0C6S8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LINGO3P0C6S8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
LINGO3P0C6S8 ANOS2P-203ENST00000472227 1816 ntBASIC21.23■□□□□ 0.99
LINGO3P0C6S8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
LINGO3P0C6S8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.23■□□□□ 0.99
LINGO3P0C6S8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LINGO3P0C6S8 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LINGO3P0C6S8 KRT18P24-201ENST00000344739 1156 ntBASIC21.23■□□□□ 0.99
LINGO3P0C6S8 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.23■□□□□ 0.99
LINGO3P0C6S8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LINGO3P0C6S8 AC103724.3-201ENST00000564481 992 ntBASIC21.23■□□□□ 0.99
LINGO3P0C6S8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LINGO3P0C6S8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LINGO3P0C6S8 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LINGO3P0C6S8 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LINGO3P0C6S8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
LINGO3P0C6S8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LINGO3P0C6S8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LINGO3P0C6S8 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms