Protein–RNA interactions for Protein: A0A1B0GVG4

CCDC194, Coiled-coil domain-containing protein 194, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC194A0A1B0GVG4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC194A0A1B0GVG4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC25.33■■□□□ 1.65
CCDC194A0A1B0GVG4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC194A0A1B0GVG4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC25.33■■□□□ 1.65
CCDC194A0A1B0GVG4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC25.33■■□□□ 1.65
CCDC194A0A1B0GVG4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC25.33■■□□□ 1.65
CCDC194A0A1B0GVG4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC25.33■■□□□ 1.65
CCDC194A0A1B0GVG4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC25.33■■□□□ 1.64
CCDC194A0A1B0GVG4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC25.33■■□□□ 1.64
CCDC194A0A1B0GVG4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC194A0A1B0GVG4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC194A0A1B0GVG4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
CCDC194A0A1B0GVG4 SERBP1P1-201ENST00000396021 1160 ntBASIC25.32■■□□□ 1.64
CCDC194A0A1B0GVG4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC25.32■■□□□ 1.64
CCDC194A0A1B0GVG4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC25.32■■□□□ 1.64
CCDC194A0A1B0GVG4 AC004687.1-201ENST00000579003 1625 ntBASIC25.32■■□□□ 1.64
CCDC194A0A1B0GVG4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC25.32■■□□□ 1.64
CCDC194A0A1B0GVG4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC194A0A1B0GVG4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC194A0A1B0GVG4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC194A0A1B0GVG4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
CCDC194A0A1B0GVG4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC25.31■■□□□ 1.64
CCDC194A0A1B0GVG4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC25.31■■□□□ 1.64
CCDC194A0A1B0GVG4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC25.31■■□□□ 1.64
CCDC194A0A1B0GVG4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC194A0A1B0GVG4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
CCDC194A0A1B0GVG4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC194A0A1B0GVG4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC194A0A1B0GVG4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC194A0A1B0GVG4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC194A0A1B0GVG4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC194A0A1B0GVG4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.31■■□□□ 1.64
CCDC194A0A1B0GVG4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.31■■□□□ 1.64
CCDC194A0A1B0GVG4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC194A0A1B0GVG4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC194A0A1B0GVG4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC25.31■■□□□ 1.64
CCDC194A0A1B0GVG4 AC133637.1-201ENST00000624115 1537 ntBASIC25.31■■□□□ 1.64
CCDC194A0A1B0GVG4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC194A0A1B0GVG4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC194A0A1B0GVG4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC194A0A1B0GVG4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CCDC194A0A1B0GVG4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CCDC194A0A1B0GVG4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
CCDC194A0A1B0GVG4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC25.3■■□□□ 1.64
CCDC194A0A1B0GVG4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
CCDC194A0A1B0GVG4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CCDC194A0A1B0GVG4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
CCDC194A0A1B0GVG4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC25.3■■□□□ 1.64
CCDC194A0A1B0GVG4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CCDC194A0A1B0GVG4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC25.29■■□□□ 1.64
CCDC194A0A1B0GVG4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
CCDC194A0A1B0GVG4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
CCDC194A0A1B0GVG4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CCDC194A0A1B0GVG4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.29■■□□□ 1.64
CCDC194A0A1B0GVG4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CCDC194A0A1B0GVG4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC25.29■■□□□ 1.64
CCDC194A0A1B0GVG4 AL138724.1-201ENST00000606771 1088 ntBASIC25.29■■□□□ 1.64
CCDC194A0A1B0GVG4 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.29■■□□□ 1.64
CCDC194A0A1B0GVG4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC25.29■■□□□ 1.64
CCDC194A0A1B0GVG4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC25.29■■□□□ 1.64
CCDC194A0A1B0GVG4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CCDC194A0A1B0GVG4 AC068473.5-201ENST00000616428 2072 ntBASIC25.28■■□□□ 1.64
CCDC194A0A1B0GVG4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC194A0A1B0GVG4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
CCDC194A0A1B0GVG4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC194A0A1B0GVG4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC194A0A1B0GVG4 HES6-206ENST00000409574 738 ntTSL 2 BASIC25.28■■□□□ 1.64
CCDC194A0A1B0GVG4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.28■■□□□ 1.64
CCDC194A0A1B0GVG4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
CCDC194A0A1B0GVG4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC194A0A1B0GVG4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
CCDC194A0A1B0GVG4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
CCDC194A0A1B0GVG4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CCDC194A0A1B0GVG4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
CCDC194A0A1B0GVG4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC25.27■■□□□ 1.64
CCDC194A0A1B0GVG4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC25.27■■□□□ 1.64
CCDC194A0A1B0GVG4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CCDC194A0A1B0GVG4 UNC93B3-201ENST00000308076 687 ntBASIC25.27■■□□□ 1.64
CCDC194A0A1B0GVG4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC25.27■■□□□ 1.64
CCDC194A0A1B0GVG4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC25.27■■□□□ 1.64
CCDC194A0A1B0GVG4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
CCDC194A0A1B0GVG4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
CCDC194A0A1B0GVG4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
CCDC194A0A1B0GVG4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
CCDC194A0A1B0GVG4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC25.27■■□□□ 1.64
CCDC194A0A1B0GVG4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC25.27■■□□□ 1.64
CCDC194A0A1B0GVG4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC25.26■■□□□ 1.63
CCDC194A0A1B0GVG4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CCDC194A0A1B0GVG4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CCDC194A0A1B0GVG4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
CCDC194A0A1B0GVG4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CCDC194A0A1B0GVG4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
CCDC194A0A1B0GVG4 AC096631.2-201ENST00000436136 790 ntBASIC25.25■■□□□ 1.63
CCDC194A0A1B0GVG4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
CCDC194A0A1B0GVG4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC25.25■■□□□ 1.63
CCDC194A0A1B0GVG4 AC011298.3-201ENST00000615796 283 ntBASIC25.25■■□□□ 1.63
CCDC194A0A1B0GVG4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
CCDC194A0A1B0GVG4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CCDC194A0A1B0GVG4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CCDC194A0A1B0GVG4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC25.25■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms