Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.68■■□□□ 1.06
NPAS2Q99743 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
NPAS2Q99743 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.68■■□□□ 1.06
NPAS2Q99743 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
NPAS2Q99743 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
NPAS2Q99743 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPAS2Q99743 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPAS2Q99743 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NPAS2Q99743 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.68■■□□□ 1.06
NPAS2Q99743 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.68■■□□□ 1.06
NPAS2Q99743 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
NPAS2Q99743 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NPAS2Q99743 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
NPAS2Q99743 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
NPAS2Q99743 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NPAS2Q99743 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NPAS2Q99743 AF131216.4-201ENST00000638924 1588 ntBASIC21.67■■□□□ 1.06
NPAS2Q99743 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.67■■□□□ 1.06
NPAS2Q99743 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.67■■□□□ 1.06
NPAS2Q99743 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.67■■□□□ 1.06
NPAS2Q99743 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.67■■□□□ 1.06
NPAS2Q99743 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.67■■□□□ 1.06
NPAS2Q99743 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NPAS2Q99743 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NPAS2Q99743 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NPAS2Q99743 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NPAS2Q99743 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.66■■□□□ 1.06
NPAS2Q99743 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPAS2Q99743 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
NPAS2Q99743 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.66■■□□□ 1.06
NPAS2Q99743 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.66■■□□□ 1.06
NPAS2Q99743 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.66■■□□□ 1.06
NPAS2Q99743 AC092028.1-203ENST00000608262 953 ntBASIC21.66■■□□□ 1.06
NPAS2Q99743 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.66■■□□□ 1.06
NPAS2Q99743 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NPAS2Q99743 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NPAS2Q99743 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NPAS2Q99743 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.65■■□□□ 1.06
NPAS2Q99743 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.65■■□□□ 1.06
NPAS2Q99743 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.65■■□□□ 1.06
NPAS2Q99743 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.65■■□□□ 1.06
NPAS2Q99743 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NPAS2Q99743 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.65■■□□□ 1.06
NPAS2Q99743 TSPY9P-201ENST00000440215 945 ntBASIC21.65■■□□□ 1.06
NPAS2Q99743 TSPY11P-201ENST00000442607 1045 ntBASIC21.65■■□□□ 1.06
NPAS2Q99743 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.65■■□□□ 1.06
NPAS2Q99743 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.65■■□□□ 1.06
NPAS2Q99743 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.65■■□□□ 1.06
NPAS2Q99743 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.65■■□□□ 1.06
NPAS2Q99743 AL022069.1-201ENST00000568025 1636 ntBASIC21.65■■□□□ 1.06
NPAS2Q99743 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NPAS2Q99743 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.65■■□□□ 1.06
NPAS2Q99743 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NPAS2Q99743 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NPAS2Q99743 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NPAS2Q99743 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.64■■□□□ 1.05
NPAS2Q99743 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
NPAS2Q99743 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.64■■□□□ 1.05
NPAS2Q99743 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.64■■□□□ 1.05
NPAS2Q99743 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.64■■□□□ 1.05
NPAS2Q99743 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.64■■□□□ 1.05
NPAS2Q99743 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
NPAS2Q99743 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.64■■□□□ 1.05
NPAS2Q99743 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NPAS2Q99743 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.64■■□□□ 1.05
NPAS2Q99743 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NPAS2Q99743 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NPAS2Q99743 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NPAS2Q99743 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NPAS2Q99743 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.63■■□□□ 1.05
NPAS2Q99743 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NPAS2Q99743 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NPAS2Q99743 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
NPAS2Q99743 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NPAS2Q99743 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.62■■□□□ 1.05
NPAS2Q99743 AC242852.2-201ENST00000615738 1807 ntBASIC21.62■■□□□ 1.05
NPAS2Q99743 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
NPAS2Q99743 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.62■■□□□ 1.05
NPAS2Q99743 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
NPAS2Q99743 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NPAS2Q99743 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NPAS2Q99743 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
NPAS2Q99743 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NPAS2Q99743 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.62■■□□□ 1.05
NPAS2Q99743 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.62■■□□□ 1.05
NPAS2Q99743 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NPAS2Q99743 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NPAS2Q99743 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.62■■□□□ 1.05
NPAS2Q99743 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.62■■□□□ 1.05
NPAS2Q99743 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NPAS2Q99743 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
NPAS2Q99743 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPAS2Q99743 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPAS2Q99743 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPAS2Q99743 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.61■■□□□ 1.05
NPAS2Q99743 KRT16P3-201ENST00000439127 1283 ntBASIC21.61■■□□□ 1.05
NPAS2Q99743 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.61■■□□□ 1.05
NPAS2Q99743 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.61■■□□□ 1.05
NPAS2Q99743 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPAS2Q99743 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms