Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RFX6Q8HWS3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RFX6Q8HWS3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RFX6Q8HWS3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RFX6Q8HWS3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
RFX6Q8HWS3 AC079834.2-201ENST00000609776 1949 ntBASIC23.06■■□□□ 1.28
RFX6Q8HWS3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFX6Q8HWS3 LINC01529-204ENST00000636474 1715 ntBASIC23.06■■□□□ 1.28
RFX6Q8HWS3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.06■■□□□ 1.28
RFX6Q8HWS3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFX6Q8HWS3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RFX6Q8HWS3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFX6Q8HWS3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.06■■□□□ 1.28
RFX6Q8HWS3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFX6Q8HWS3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RFX6Q8HWS3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFX6Q8HWS3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RFX6Q8HWS3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFX6Q8HWS3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFX6Q8HWS3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFX6Q8HWS3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFX6Q8HWS3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
RFX6Q8HWS3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.05■■□□□ 1.28
RFX6Q8HWS3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
RFX6Q8HWS3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RFX6Q8HWS3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.05■■□□□ 1.28
RFX6Q8HWS3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.05■■□□□ 1.28
RFX6Q8HWS3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RFX6Q8HWS3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
RFX6Q8HWS3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
RFX6Q8HWS3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
RFX6Q8HWS3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RFX6Q8HWS3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.04■■□□□ 1.28
RFX6Q8HWS3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RFX6Q8HWS3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
RFX6Q8HWS3 UNC93B8-201ENST00000511903 705 ntBASIC23.04■■□□□ 1.28
RFX6Q8HWS3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RFX6Q8HWS3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.04■■□□□ 1.28
RFX6Q8HWS3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RFX6Q8HWS3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RFX6Q8HWS3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
RFX6Q8HWS3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RFX6Q8HWS3 AC009102.2-201ENST00000606772 1639 ntBASIC23.04■■□□□ 1.28
RFX6Q8HWS3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RFX6Q8HWS3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RFX6Q8HWS3 FP325331.1-202ENST00000623531 1380 ntBASIC23.03■■□□□ 1.28
RFX6Q8HWS3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
RFX6Q8HWS3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RFX6Q8HWS3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RFX6Q8HWS3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RFX6Q8HWS3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.03■■□□□ 1.28
RFX6Q8HWS3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RFX6Q8HWS3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RFX6Q8HWS3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RFX6Q8HWS3 GUSBP5-202ENST00000510805 1989 ntBASIC23.02■■□□□ 1.28
RFX6Q8HWS3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RFX6Q8HWS3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RFX6Q8HWS3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
RFX6Q8HWS3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
RFX6Q8HWS3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RFX6Q8HWS3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RFX6Q8HWS3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
RFX6Q8HWS3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RFX6Q8HWS3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.01■■□□□ 1.27
RFX6Q8HWS3 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.01■■□□□ 1.27
RFX6Q8HWS3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.01■■□□□ 1.27
RFX6Q8HWS3 AL035685.1-201ENST00000636663 812 ntBASIC23.01■■□□□ 1.27
RFX6Q8HWS3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RFX6Q8HWS3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
RFX6Q8HWS3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RFX6Q8HWS3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RFX6Q8HWS3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.01■■□□□ 1.27
RFX6Q8HWS3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RFX6Q8HWS3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23■■□□□ 1.27
RFX6Q8HWS3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
RFX6Q8HWS3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RFX6Q8HWS3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23■■□□□ 1.27
RFX6Q8HWS3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RFX6Q8HWS3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RFX6Q8HWS3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
RFX6Q8HWS3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
RFX6Q8HWS3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RFX6Q8HWS3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
RFX6Q8HWS3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RFX6Q8HWS3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23■■□□□ 1.27
RFX6Q8HWS3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RFX6Q8HWS3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RFX6Q8HWS3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
RFX6Q8HWS3 ESRRAP2-201ENST00000418437 1549 ntBASIC22.99■■□□□ 1.27
RFX6Q8HWS3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
RFX6Q8HWS3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RFX6Q8HWS3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.99■■□□□ 1.27
RFX6Q8HWS3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
RFX6Q8HWS3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.99■■□□□ 1.27
RFX6Q8HWS3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RFX6Q8HWS3 MIR6724-1-201ENST00000616420 92 ntBASIC22.99■■□□□ 1.27
RFX6Q8HWS3 MIR6724-2-201ENST00000616483 92 ntBASIC22.99■■□□□ 1.27
RFX6Q8HWS3 MIR6724-4-201ENST00000617390 92 ntBASIC22.99■■□□□ 1.27
RFX6Q8HWS3 MIR6724-3-201ENST00000622482 92 ntBASIC22.99■■□□□ 1.27
RFX6Q8HWS3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms