Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSNK1A1P48729 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.73■□□□□ 0.75
CSNK1A1P48729 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.73■□□□□ 0.75
CSNK1A1P48729 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CSNK1A1P48729 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSNK1A1P48729 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSNK1A1P48729 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSNK1A1P48729 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.73■□□□□ 0.75
CSNK1A1P48729 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CSNK1A1P48729 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.72■□□□□ 0.75
CSNK1A1P48729 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.72■□□□□ 0.75
CSNK1A1P48729 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.72■□□□□ 0.75
CSNK1A1P48729 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1A1P48729 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CSNK1A1P48729 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1A1P48729 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1A1P48729 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.72■□□□□ 0.75
CSNK1A1P48729 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1A1P48729 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.72■□□□□ 0.75
CSNK1A1P48729 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.72■□□□□ 0.75
CSNK1A1P48729 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.72■□□□□ 0.75
CSNK1A1P48729 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.72■□□□□ 0.75
CSNK1A1P48729 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1A1P48729 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.72■□□□□ 0.75
CSNK1A1P48729 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1A1P48729 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1A1P48729 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1A1P48729 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CSNK1A1P48729 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.71■□□□□ 0.75
CSNK1A1P48729 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CSNK1A1P48729 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1A1P48729 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.71■□□□□ 0.75
CSNK1A1P48729 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.71■□□□□ 0.75
CSNK1A1P48729 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1A1P48729 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.71■□□□□ 0.75
CSNK1A1P48729 AC009086.3-201ENST00000623486 1008 ntBASIC19.71■□□□□ 0.75
CSNK1A1P48729 AC241377.3-202ENST00000626088 1088 ntBASIC19.71■□□□□ 0.75
CSNK1A1P48729 AC241585.3-202ENST00000628937 1088 ntBASIC19.71■□□□□ 0.75
CSNK1A1P48729 AC245100.8-202ENST00000629247 1058 ntBASIC19.71■□□□□ 0.75
CSNK1A1P48729 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.71■□□□□ 0.75
CSNK1A1P48729 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CSNK1A1P48729 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1A1P48729 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.71■□□□□ 0.75
CSNK1A1P48729 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1A1P48729 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.71■□□□□ 0.75
CSNK1A1P48729 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1A1P48729 AC133561.1-201ENST00000568600 2415 ntBASIC19.71■□□□□ 0.75
CSNK1A1P48729 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1A1P48729 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1A1P48729 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CSNK1A1P48729 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1A1P48729 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1A1P48729 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.7■□□□□ 0.74
CSNK1A1P48729 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.7■□□□□ 0.74
CSNK1A1P48729 SRD5A1P1-201ENST00000442297 786 ntBASIC19.7■□□□□ 0.74
CSNK1A1P48729 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.7■□□□□ 0.74
CSNK1A1P48729 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1A1P48729 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.7■□□□□ 0.74
CSNK1A1P48729 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.7■□□□□ 0.74
CSNK1A1P48729 AL512631.2-201ENST00000604634 923 ntBASIC19.7■□□□□ 0.74
CSNK1A1P48729 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1A1P48729 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CSNK1A1P48729 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
CSNK1A1P48729 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CSNK1A1P48729 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.7■□□□□ 0.74
CSNK1A1P48729 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1A1P48729 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1A1P48729 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1A1P48729 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
CSNK1A1P48729 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1A1P48729 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.69■□□□□ 0.74
CSNK1A1P48729 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1A1P48729 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1A1P48729 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.69■□□□□ 0.74
CSNK1A1P48729 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1A1P48729 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1A1P48729 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.69■□□□□ 0.74
CSNK1A1P48729 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.69■□□□□ 0.74
CSNK1A1P48729 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.69■□□□□ 0.74
CSNK1A1P48729 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.69■□□□□ 0.74
CSNK1A1P48729 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1A1P48729 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.69■□□□□ 0.74
CSNK1A1P48729 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CSNK1A1P48729 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1A1P48729 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
CSNK1A1P48729 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.68■□□□□ 0.74
CSNK1A1P48729 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CSNK1A1P48729 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.68■□□□□ 0.74
CSNK1A1P48729 AC131212.1-201ENST00000613771 668 ntBASIC19.68■□□□□ 0.74
CSNK1A1P48729 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1A1P48729 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.68■□□□□ 0.74
CSNK1A1P48729 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.68■□□□□ 0.74
CSNK1A1P48729 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1A1P48729 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
CSNK1A1P48729 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1A1P48729 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.68■□□□□ 0.74
CSNK1A1P48729 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSNK1A1P48729 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.67■□□□□ 0.74
CSNK1A1P48729 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSNK1A1P48729 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms