Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SAA2-SAA4A0A096LPE2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SAA2-SAA4A0A096LPE2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SAA2-SAA4A0A096LPE2 UNC93B8-201ENST00000511903 705 ntBASIC18.15■□□□□ 0.5
SAA2-SAA4A0A096LPE2 AL035685.1-201ENST00000636663 812 ntBASIC18.15■□□□□ 0.5
SAA2-SAA4A0A096LPE2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SAA2-SAA4A0A096LPE2 AC009102.2-201ENST00000606772 1639 ntBASIC18.15■□□□□ 0.5
SAA2-SAA4A0A096LPE2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SAA2-SAA4A0A096LPE2 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.15■□□□□ 0.5
SAA2-SAA4A0A096LPE2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.15■□□□□ 0.5
SAA2-SAA4A0A096LPE2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SAA2-SAA4A0A096LPE2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
SAA2-SAA4A0A096LPE2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SAA2-SAA4A0A096LPE2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.14■□□□□ 0.5
SAA2-SAA4A0A096LPE2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SAA2-SAA4A0A096LPE2 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SAA2-SAA4A0A096LPE2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SAA2-SAA4A0A096LPE2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SAA2-SAA4A0A096LPE2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.14■□□□□ 0.49
SAA2-SAA4A0A096LPE2 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.14■□□□□ 0.49
SAA2-SAA4A0A096LPE2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.14■□□□□ 0.49
SAA2-SAA4A0A096LPE2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.14■□□□□ 0.49
SAA2-SAA4A0A096LPE2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SAA2-SAA4A0A096LPE2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SAA2-SAA4A0A096LPE2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SAA2-SAA4A0A096LPE2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SAA2-SAA4A0A096LPE2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SAA2-SAA4A0A096LPE2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SAA2-SAA4A0A096LPE2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SAA2-SAA4A0A096LPE2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SAA2-SAA4A0A096LPE2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SAA2-SAA4A0A096LPE2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SAA2-SAA4A0A096LPE2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SAA2-SAA4A0A096LPE2 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
SAA2-SAA4A0A096LPE2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.13■□□□□ 0.49
SAA2-SAA4A0A096LPE2 FP325331.1-202ENST00000623531 1380 ntBASIC18.13■□□□□ 0.49
SAA2-SAA4A0A096LPE2 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SAA2-SAA4A0A096LPE2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SAA2-SAA4A0A096LPE2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SAA2-SAA4A0A096LPE2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SAA2-SAA4A0A096LPE2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SAA2-SAA4A0A096LPE2 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SAA2-SAA4A0A096LPE2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SAA2-SAA4A0A096LPE2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SAA2-SAA4A0A096LPE2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.12■□□□□ 0.49
SAA2-SAA4A0A096LPE2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SAA2-SAA4A0A096LPE2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.12■□□□□ 0.49
SAA2-SAA4A0A096LPE2 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SAA2-SAA4A0A096LPE2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SAA2-SAA4A0A096LPE2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SAA2-SAA4A0A096LPE2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SAA2-SAA4A0A096LPE2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
SAA2-SAA4A0A096LPE2 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SAA2-SAA4A0A096LPE2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.11■□□□□ 0.49
SAA2-SAA4A0A096LPE2 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SAA2-SAA4A0A096LPE2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SAA2-SAA4A0A096LPE2 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SAA2-SAA4A0A096LPE2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.11■□□□□ 0.49
SAA2-SAA4A0A096LPE2 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
SAA2-SAA4A0A096LPE2 KRT16P3-201ENST00000439127 1283 ntBASIC18.11■□□□□ 0.49
SAA2-SAA4A0A096LPE2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SAA2-SAA4A0A096LPE2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.11■□□□□ 0.49
SAA2-SAA4A0A096LPE2 MIR6724-1-201ENST00000616420 92 ntBASIC18.11■□□□□ 0.49
SAA2-SAA4A0A096LPE2 MIR6724-2-201ENST00000616483 92 ntBASIC18.11■□□□□ 0.49
SAA2-SAA4A0A096LPE2 MIR6724-4-201ENST00000617390 92 ntBASIC18.11■□□□□ 0.49
SAA2-SAA4A0A096LPE2 MIR6724-3-201ENST00000622482 92 ntBASIC18.11■□□□□ 0.49
SAA2-SAA4A0A096LPE2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SAA2-SAA4A0A096LPE2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.11■□□□□ 0.49
SAA2-SAA4A0A096LPE2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SAA2-SAA4A0A096LPE2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SAA2-SAA4A0A096LPE2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SAA2-SAA4A0A096LPE2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.1■□□□□ 0.49
SAA2-SAA4A0A096LPE2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SAA2-SAA4A0A096LPE2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SAA2-SAA4A0A096LPE2 GUSBP5-202ENST00000510805 1989 ntBASIC18.1■□□□□ 0.49
SAA2-SAA4A0A096LPE2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SAA2-SAA4A0A096LPE2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.1■□□□□ 0.49
SAA2-SAA4A0A096LPE2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SAA2-SAA4A0A096LPE2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.1■□□□□ 0.49
SAA2-SAA4A0A096LPE2 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SAA2-SAA4A0A096LPE2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SAA2-SAA4A0A096LPE2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SAA2-SAA4A0A096LPE2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SAA2-SAA4A0A096LPE2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.1■□□□□ 0.49
SAA2-SAA4A0A096LPE2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SAA2-SAA4A0A096LPE2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SAA2-SAA4A0A096LPE2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SAA2-SAA4A0A096LPE2 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SAA2-SAA4A0A096LPE2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SAA2-SAA4A0A096LPE2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SAA2-SAA4A0A096LPE2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SAA2-SAA4A0A096LPE2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SAA2-SAA4A0A096LPE2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SAA2-SAA4A0A096LPE2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.09■□□□□ 0.49
SAA2-SAA4A0A096LPE2 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SAA2-SAA4A0A096LPE2 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SAA2-SAA4A0A096LPE2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.09■□□□□ 0.49
SAA2-SAA4A0A096LPE2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.09■□□□□ 0.49
SAA2-SAA4A0A096LPE2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.09■□□□□ 0.49
SAA2-SAA4A0A096LPE2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms