Protein–RNA interactions for Protein: Q9Y5G5

PCDHGA8, Protocadherin gamma-A8, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8Q9Y5G5 CLDN5-201ENST00000403084 2357 ntBASIC21.82■■□□□ 1.08
PCDHGA8Q9Y5G5 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA8Q9Y5G5 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDHGA8Q9Y5G5 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA8Q9Y5G5 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA8Q9Y5G5 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA8Q9Y5G5 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDHGA8Q9Y5G5 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA8Q9Y5G5 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA8Q9Y5G5 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
PCDHGA8Q9Y5G5 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA8Q9Y5G5 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHGA8Q9Y5G5 AC136469.2-201ENST00000623944 1028 ntBASIC21.81■■□□□ 1.08
PCDHGA8Q9Y5G5 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.81■■□□□ 1.08
PCDHGA8Q9Y5G5 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA8Q9Y5G5 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PCDHGA8Q9Y5G5 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDHGA8Q9Y5G5 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA8Q9Y5G5 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA8Q9Y5G5 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA8Q9Y5G5 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDHGA8Q9Y5G5 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDHGA8Q9Y5G5 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.8■■□□□ 1.08
PCDHGA8Q9Y5G5 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA8Q9Y5G5 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA8Q9Y5G5 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA8Q9Y5G5 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA8Q9Y5G5 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA8Q9Y5G5 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA8Q9Y5G5 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHGA8Q9Y5G5 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHGA8Q9Y5G5 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA8Q9Y5G5 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHGA8Q9Y5G5 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA8Q9Y5G5 AC141586.4-201ENST00000624558 1573 ntBASIC21.78■■□□□ 1.08
PCDHGA8Q9Y5G5 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA8Q9Y5G5 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA8Q9Y5G5 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA8Q9Y5G5 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA8Q9Y5G5 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHGA8Q9Y5G5 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA8Q9Y5G5 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHGA8Q9Y5G5 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHGA8Q9Y5G5 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA8Q9Y5G5 C17orf82-201ENST00000623772 1530 ntBASIC21.78■■□□□ 1.08
PCDHGA8Q9Y5G5 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA8Q9Y5G5 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA8Q9Y5G5 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA8Q9Y5G5 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA8Q9Y5G5 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA8Q9Y5G5 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
PCDHGA8Q9Y5G5 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGA8Q9Y5G5 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGA8Q9Y5G5 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHGA8Q9Y5G5 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGA8Q9Y5G5 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGA8Q9Y5G5 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHGA8Q9Y5G5 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCDHGA8Q9Y5G5 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
PCDHGA8Q9Y5G5 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA8Q9Y5G5 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.76■■□□□ 1.07
PCDHGA8Q9Y5G5 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.76■■□□□ 1.07
PCDHGA8Q9Y5G5 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA8Q9Y5G5 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA8Q9Y5G5 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHGA8Q9Y5G5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
PCDHGA8Q9Y5G5 AC233992.3-201ENST00000607491 485 ntBASIC21.76■■□□□ 1.07
PCDHGA8Q9Y5G5 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
PCDHGA8Q9Y5G5 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA8Q9Y5G5 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHGA8Q9Y5G5 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA8Q9Y5G5 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA8Q9Y5G5 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA8Q9Y5G5 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA8Q9Y5G5 BX842568.3-201ENST00000418104 571 ntBASIC21.75■■□□□ 1.07
PCDHGA8Q9Y5G5 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.75■■□□□ 1.07
PCDHGA8Q9Y5G5 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PCDHGA8Q9Y5G5 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA8Q9Y5G5 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA8Q9Y5G5 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
PCDHGA8Q9Y5G5 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGA8Q9Y5G5 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGA8Q9Y5G5 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGA8Q9Y5G5 AL022069.1-201ENST00000568025 1636 ntBASIC21.74■■□□□ 1.07
PCDHGA8Q9Y5G5 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PCDHGA8Q9Y5G5 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHGA8Q9Y5G5 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.74■■□□□ 1.07
PCDHGA8Q9Y5G5 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGA8Q9Y5G5 AC004812.2-201ENST00000611079 2094 ntBASIC21.74■■□□□ 1.07
PCDHGA8Q9Y5G5 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHGA8Q9Y5G5 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGA8Q9Y5G5 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHGA8Q9Y5G5 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PCDHGA8Q9Y5G5 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA8Q9Y5G5 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA8Q9Y5G5 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
PCDHGA8Q9Y5G5 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA8Q9Y5G5 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA8Q9Y5G5 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA8Q9Y5G5 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms