Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC30.69■■■□□ 2.5
KRT28Q7Z3Y7 AC016769.1-201ENST00000409132 1010 ntBASIC30.69■■■□□ 2.5
KRT28Q7Z3Y7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
KRT28Q7Z3Y7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
KRT28Q7Z3Y7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
KRT28Q7Z3Y7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
KRT28Q7Z3Y7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
KRT28Q7Z3Y7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC30.68■■■□□ 2.5
KRT28Q7Z3Y7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
KRT28Q7Z3Y7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC30.68■■■□□ 2.5
KRT28Q7Z3Y7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC30.67■■■□□ 2.5
KRT28Q7Z3Y7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC30.67■■■□□ 2.5
KRT28Q7Z3Y7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
KRT28Q7Z3Y7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
KRT28Q7Z3Y7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC30.66■■■□□ 2.5
KRT28Q7Z3Y7 MAP2K4P1-201ENST00000438453 1195 ntBASIC30.66■■■□□ 2.5
KRT28Q7Z3Y7 PPP1R14BP3-201ENST00000509033 445 ntBASIC30.66■■■□□ 2.5
KRT28Q7Z3Y7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
KRT28Q7Z3Y7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC30.66■■■□□ 2.5
KRT28Q7Z3Y7 AC104771.1-201ENST00000603335 964 ntBASIC30.66■■■□□ 2.5
KRT28Q7Z3Y7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC30.66■■■□□ 2.5
KRT28Q7Z3Y7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
KRT28Q7Z3Y7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC30.65■■■□□ 2.5
KRT28Q7Z3Y7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC30.65■■■□□ 2.5
KRT28Q7Z3Y7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
KRT28Q7Z3Y7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC30.65■■■□□ 2.5
KRT28Q7Z3Y7 ABHD17AP1-201ENST00000358206 933 ntBASIC30.65■■■□□ 2.5
KRT28Q7Z3Y7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC30.65■■■□□ 2.5
KRT28Q7Z3Y7 DUX4L4-201ENST00000566884 1269 ntBASIC30.65■■■□□ 2.5
KRT28Q7Z3Y7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC30.65■■■□□ 2.5
KRT28Q7Z3Y7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC30.65■■■□□ 2.5
KRT28Q7Z3Y7 AL121749.1-202ENST00000609313 2153 ntBASIC30.65■■■□□ 2.5
KRT28Q7Z3Y7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
KRT28Q7Z3Y7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC30.64■■■□□ 2.5
KRT28Q7Z3Y7 AC026185.1-201ENST00000445748 174 ntBASIC30.64■■■□□ 2.5
KRT28Q7Z3Y7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC30.64■■■□□ 2.5
KRT28Q7Z3Y7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC30.64■■■□□ 2.5
KRT28Q7Z3Y7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
KRT28Q7Z3Y7 GAS2L1P2-201ENST00000436355 1356 ntBASIC30.64■■■□□ 2.5
KRT28Q7Z3Y7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC30.64■■■□□ 2.5
KRT28Q7Z3Y7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
KRT28Q7Z3Y7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
KRT28Q7Z3Y7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
KRT28Q7Z3Y7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
KRT28Q7Z3Y7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
KRT28Q7Z3Y7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
KRT28Q7Z3Y7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
KRT28Q7Z3Y7 DBI-210ENST00000542275 757 ntTSL 5 BASIC30.63■■■□□ 2.49
KRT28Q7Z3Y7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC30.63■■■□□ 2.49
KRT28Q7Z3Y7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC30.63■■■□□ 2.49
KRT28Q7Z3Y7 FP325331.1-202ENST00000623531 1380 ntBASIC30.63■■■□□ 2.49
KRT28Q7Z3Y7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
KRT28Q7Z3Y7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC30.63■■■□□ 2.49
KRT28Q7Z3Y7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
KRT28Q7Z3Y7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
KRT28Q7Z3Y7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
KRT28Q7Z3Y7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
KRT28Q7Z3Y7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
KRT28Q7Z3Y7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC30.62■■■□□ 2.49
KRT28Q7Z3Y7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
KRT28Q7Z3Y7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
KRT28Q7Z3Y7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC30.61■■■□□ 2.49
KRT28Q7Z3Y7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC30.61■■■□□ 2.49
KRT28Q7Z3Y7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC30.61■■■□□ 2.49
KRT28Q7Z3Y7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
KRT28Q7Z3Y7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
KRT28Q7Z3Y7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
KRT28Q7Z3Y7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC30.61■■■□□ 2.49
KRT28Q7Z3Y7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC30.61■■■□□ 2.49
KRT28Q7Z3Y7 TPRG1LP1-201ENST00000598702 760 ntBASIC30.61■■■□□ 2.49
KRT28Q7Z3Y7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
KRT28Q7Z3Y7 AP004607.4-201ENST00000530158 1459 ntBASIC30.61■■■□□ 2.49
KRT28Q7Z3Y7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
KRT28Q7Z3Y7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
KRT28Q7Z3Y7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
KRT28Q7Z3Y7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
KRT28Q7Z3Y7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC30.61■■■□□ 2.49
KRT28Q7Z3Y7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
KRT28Q7Z3Y7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
KRT28Q7Z3Y7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
KRT28Q7Z3Y7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC30.6■■■□□ 2.49
KRT28Q7Z3Y7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC30.6■■■□□ 2.49
KRT28Q7Z3Y7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC30.6■■■□□ 2.49
KRT28Q7Z3Y7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC30.6■■■□□ 2.49
KRT28Q7Z3Y7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC30.6■■■□□ 2.49
KRT28Q7Z3Y7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC30.6■■■□□ 2.49
KRT28Q7Z3Y7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC30.6■■■□□ 2.49
KRT28Q7Z3Y7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC30.59■■■□□ 2.49
KRT28Q7Z3Y7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC30.59■■■□□ 2.49
KRT28Q7Z3Y7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
KRT28Q7Z3Y7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
KRT28Q7Z3Y7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
KRT28Q7Z3Y7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC30.59■■■□□ 2.49
KRT28Q7Z3Y7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC30.59■■■□□ 2.49
KRT28Q7Z3Y7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC30.59■■■□□ 2.49
KRT28Q7Z3Y7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
KRT28Q7Z3Y7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC30.59■■■□□ 2.49
KRT28Q7Z3Y7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC30.58■■■□□ 2.49
KRT28Q7Z3Y7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
KRT28Q7Z3Y7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms