Protein–RNA interactions for Protein: P35732

DEF1, RNA polymerase II degradation factor 1, yeastyeast

Known RBP Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DEF1P35732 BUL1YMR275C 2931 nt5.42□□□□□ -1.54
DEF1P35732 TGL1YKL140W 1647 nt5.42□□□□□ -1.54
DEF1P35732 SKG6YHR149C 2205 nt5.42□□□□□ -1.54
DEF1P35732 YHB1YGR234W 1200 nt5.42□□□□□ -1.54
DEF1P35732 CUP1-1YHR053C 186 nt5.42□□□□□ -1.54
DEF1P35732 CUP1-2YHR055C 186 nt5.42□□□□□ -1.54
DEF1P35732 CMC1YKL137W 336 nt5.42□□□□□ -1.54
DEF1P35732 RCN1YKL159C 636 nt5.42□□□□□ -1.54
DEF1P35732 YIM2YMR151W 438 nt5.42□□□□□ -1.54
DEF1P35732 YOR032W-AYOR032W-A 201 nt5.42□□□□□ -1.54
DEF1P35732 CDC48YDL126C 2508 nt5.42□□□□□ -1.54
DEF1P35732 YSH1YLR277C 2340 nt5.42□□□□□ -1.54
DEF1P35732 SRO9YCL037C 1305 nt5.42□□□□□ -1.54
DEF1P35732 YLR456WYLR456W 615 nt5.41□□□□□ -1.54
DEF1P35732 BUD21YOR078W 645 nt5.41□□□□□ -1.54
DEF1P35732 DCS2YOR173W 1062 nt5.41□□□□□ -1.54
DEF1P35732 snR17bsnR17b 332 nt5.41□□□□□ -1.54
DEF1P35732 PMT5YDL093W 2232 nt5.41□□□□□ -1.54
DEF1P35732 TDA11YHR159W 1515 nt5.41□□□□□ -1.54
DEF1P35732 ADY2YCR010C 852 nt5.4□□□□□ -1.54
DEF1P35732 GLO2YDR272W 825 nt5.4□□□□□ -1.54
DEF1P35732 YDR524W-CYDR524W-C 90 nt5.4□□□□□ -1.54
DEF1P35732 YHR175W-AYHR175W-A 150 nt5.4□□□□□ -1.54
DEF1P35732 REH1YLR387C 1299 nt5.4□□□□□ -1.54
DEF1P35732 SRT1YMR101C 1032 nt5.4□□□□□ -1.54
DEF1P35732 INP1YMR204C 1263 nt5.4□□□□□ -1.54
DEF1P35732 FDH1YOR388C 1131 nt5.4□□□□□ -1.54
DEF1P35732 HSP82YPL240C 2130 nt5.4□□□□□ -1.54
DEF1P35732 RBD2YPL246C 789 nt5.4□□□□□ -1.54
DEF1P35732 CUS1YMR240C 1311 nt5.4□□□□□ -1.55
DEF1P35732 CLA4YNL298W 2529 nt5.4□□□□□ -1.55
DEF1P35732 NSA1YGL111W 1392 nt5.4□□□□□ -1.55
DEF1P35732 MGS1YNL218W 1764 nt5.39□□□□□ -1.55
DEF1P35732 PRD1YCL057W 2139 nt5.39□□□□□ -1.55
DEF1P35732 HST1YOL068C 1512 nt5.39□□□□□ -1.55
DEF1P35732 CPR1YDR155C 489 nt5.39□□□□□ -1.55
DEF1P35732 MNN10YDR245W 1182 nt5.39□□□□□ -1.55
DEF1P35732 ASP1YDR321W 1146 nt5.39□□□□□ -1.55
DEF1P35732 NIT2YJL126W 924 nt5.39□□□□□ -1.55
DEF1P35732 RPS31YLR167W 459 nt5.39□□□□□ -1.55
DEF1P35732 PRE7YBL041W 726 nt5.39□□□□□ -1.55
DEF1P35732 AIF1YNR074C 1137 nt5.39□□□□□ -1.55
DEF1P35732 SAS5YOR213C 747 nt5.39□□□□□ -1.55
DEF1P35732 CNS1YBR155W 1158 nt5.39□□□□□ -1.55
DEF1P35732 RAD7YJR052W 1698 nt5.39□□□□□ -1.55
DEF1P35732 CRT10YOL063C 2874 nt5.38□□□□□ -1.55
DEF1P35732 SIS2YKR072C 1689 nt5.38□□□□□ -1.55
DEF1P35732 YDL162CYDL162C 357 nt5.38□□□□□ -1.55
DEF1P35732 INO2YDR123C 915 nt5.38□□□□□ -1.55
DEF1P35732 CAB1YDR531W 1104 nt5.38□□□□□ -1.55
DEF1P35732 MOB2YFL034C-B 864 nt5.38□□□□□ -1.55
DEF1P35732 KEG1YFR042W 603 nt5.38□□□□□ -1.55
DEF1P35732 YGL262WYGL262W 528 nt5.38□□□□□ -1.55
DEF1P35732 BGL2YGR282C 942 nt5.38□□□□□ -1.55
DEF1P35732 YHR095WYHR095W 495 nt5.38□□□□□ -1.55
DEF1P35732 YIL089WYIL089W 618 nt5.38□□□□□ -1.55
DEF1P35732 SYN8YAL014C 768 nt5.38□□□□□ -1.55
DEF1P35732 YKL123WYKL123W 381 nt5.38□□□□□ -1.55
DEF1P35732 SIC1YLR079W 855 nt5.38□□□□□ -1.55
DEF1P35732 YLR125WYLR125W 411 nt5.38□□□□□ -1.55
DEF1P35732 NIT3YLR351C 876 nt5.38□□□□□ -1.55
DEF1P35732 PIN2YOR104W 849 nt5.38□□□□□ -1.55
DEF1P35732 YCL041CYCL041C 495 nt5.38□□□□□ -1.55
DEF1P35732 DXO1YDR370C 1329 nt5.38□□□□□ -1.55
DEF1P35732 COQ6YGR255C 1440 nt5.38□□□□□ -1.55
DEF1P35732 SET4YJL105W 1683 nt5.37□□□□□ -1.55
DEF1P35732 YIL047C-AYIL047C-A 369 nt5.37□□□□□ -1.55
DEF1P35732 TOM7YNL070W 183 nt5.37□□□□□ -1.55
DEF1P35732 RUF22RUF22 515 nt5.37□□□□□ -1.55
DEF1P35732 DAL82YNL314W 768 nt5.37□□□□□ -1.55
DEF1P35732 YOR152CYOR152C 771 nt5.37□□□□□ -1.55
DEF1P35732 CSH1YBR161W 1131 nt5.37□□□□□ -1.55
DEF1P35732 KRE6YPR159W 2163 nt5.37□□□□□ -1.55
DEF1P35732 RSC6YCR052W 1452 nt5.37□□□□□ -1.55
DEF1P35732 FKH1YIL131C 1455 nt5.37□□□□□ -1.55
DEF1P35732 HXT7YDR342C 1713 nt5.37□□□□□ -1.55
DEF1P35732 HXT6YDR343C 1713 nt5.37□□□□□ -1.55
DEF1P35732 PRM7YDL039C 2097 nt5.36□□□□□ -1.55
DEF1P35732 YCR097W-AYCR097W-A 267 nt5.36□□□□□ -1.55
DEF1P35732 GIR2YDR152W 798 nt5.36□□□□□ -1.55
DEF1P35732 YIP5YGL161C 933 nt5.36□□□□□ -1.55
DEF1P35732 tN(GUU)CtN(GUU)C 74 nt5.36□□□□□ -1.55
DEF1P35732 tN(GUU)FtN(GUU)F 74 nt5.36□□□□□ -1.55
DEF1P35732 tN(GUU)GtN(GUU)G 74 nt5.36□□□□□ -1.55
DEF1P35732 tN(GUU)KtN(GUU)K 74 nt5.36□□□□□ -1.55
DEF1P35732 tN(GUU)LtN(GUU)L 74 nt5.36□□□□□ -1.55
DEF1P35732 tN(GUU)N1tN(GUU)N1 74 nt5.36□□□□□ -1.55
DEF1P35732 tN(GUU)N2tN(GUU)N2 74 nt5.36□□□□□ -1.55
DEF1P35732 tN(GUU)O1tN(GUU)O1 74 nt5.36□□□□□ -1.55
DEF1P35732 tN(GUU)O2tN(GUU)O2 74 nt5.36□□□□□ -1.55
DEF1P35732 tN(GUU)PtN(GUU)P 74 nt5.36□□□□□ -1.55
DEF1P35732 HSX1tR(CCU)J 72 nt5.36□□□□□ -1.55
DEF1P35732 MRT4YKL009W 711 nt5.36□□□□□ -1.55
DEF1P35732 TFS1YLR178C 660 nt5.36□□□□□ -1.55
DEF1P35732 YLR326WYLR326W 723 nt5.36□□□□□ -1.55
DEF1P35732 ARG1YOL058W 1263 nt5.36□□□□□ -1.55
DEF1P35732 MGE1YOR232W 687 nt5.36□□□□□ -1.55
DEF1P35732 YBR139WYBR139W 1527 nt5.36□□□□□ -1.55
DEF1P35732 HOS3YPL116W 2094 nt5.36□□□□□ -1.55
DEF1P35732 ECM32YER176W 3366 nt5.36□□□□□ -1.55
Retrieved 100 of 7,029 protein–RNA pairs in 56.5 ms