Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.278e-8■■■■□ 20.3
CSTF2P33240 UBE2D3-209ENST00000394804 4166 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.628e-8■■■■□ 20.3
CSTF2P33240 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.688e-8■■■■□ 20.3
CSTF2P33240 PHYHIPL-204ENST00000486074 1971 ntTSL 28.85□□□□□ -0.991e-9■■■■□ 20.2
CSTF2P33240 PHYHIPL-202ENST00000373880 3578 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.161e-9■■■■□ 20.2
CSTF2P33240 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.26□□□□□ -1.411e-9■■■■□ 20.2
CSTF2P33240 DRAM2-208ENST00000484310 1872 ntTSL 1 (best)22.34■■□□□ 1.173e-6■■■■□ 20.2
CSTF2P33240 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.153e-6■■■■□ 20.2
CSTF2P33240 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.823e-6■■■■□ 20.2
CSTF2P33240 DRAM2-203ENST00000462092 802 ntTSL 211.89□□□□□ -0.513e-6■■■■□ 20.2
CSTF2P33240 DRAM2-204ENST00000463682 688 ntTSL 38.72□□□□□ -1.013e-6■■■■□ 20.2
CSTF2P33240 DRAM2-210ENST00000496430 767 ntTSL 56.99□□□□□ -1.293e-6■■■■□ 20.2
CSTF2P33240 DRAM2-209ENST00000490780 769 ntTSL 26.56□□□□□ -1.363e-6■■■■□ 20.2
CSTF2P33240 DRAM2-207ENST00000480600 533 ntTSL 52.82□□□□□ -1.963e-6■■■■□ 20.2
CSTF2P33240 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.882e-12■■■■□ 20.2
CSTF2P33240 MVD-210ENST00000565610 507 ntTSL 319.44■□□□□ 0.72e-12■■■■□ 20.2
CSTF2P33240 MVD-214ENST00000567064 758 ntTSL 318.28■□□□□ 0.522e-12■■■■□ 20.2
CSTF2P33240 MVD-216ENST00000568709 809 ntTSL 518.21■□□□□ 0.512e-12■■■■□ 20.2
CSTF2P33240 MVD-208ENST00000563785 888 ntTSL 218.03■□□□□ 0.482e-12■■■■□ 20.2
CSTF2P33240 MVD-217ENST00000569177 870 ntTSL 516.48■□□□□ 0.232e-12■■■■□ 20.2
CSTF2P33240 MVD-215ENST00000568133 853 ntTSL 316.08■□□□□ 0.162e-12■■■■□ 20.2
CSTF2P33240 MVD-206ENST00000563170 904 ntTSL 316.05■□□□□ 0.162e-12■■■■□ 20.2
CSTF2P33240 MVD-207ENST00000563463 543 ntTSL 315.91■□□□□ 0.142e-12■■■■□ 20.2
CSTF2P33240 HNRNPDL-209ENST00000630114 1433 ntTSL 520.13■□□□□ 0.812e-9■■■■□ 20.2
CSTF2P33240 HNRNPDL-203ENST00000502762 2356 ntTSL 1 (best)19.42■□□□□ 0.72e-9■■■■□ 20.2
CSTF2P33240 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.312e-9■■■■□ 20.2
CSTF2P33240 HNRNPDL-202ENST00000349655 1402 ntTSL 1 (best)16.54■□□□□ 0.242e-9■■■■□ 20.2
CSTF2P33240 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.232e-9■■■■□ 20.2
CSTF2P33240 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.082e-9■■■■□ 20.2
CSTF2P33240 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.9□□□□□ -0.342e-9■■■■□ 20.2
CSTF2P33240 HNRNPDL-201ENST00000295470 3781 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.732e-9■■■■□ 20.2
CSTF2P33240 HNRNPDL-204ENST00000507721 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.032e-9■■■■□ 20.2
CSTF2P33240 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.6■■□□□ 1.212e-13■■■■□ 20.2
CSTF2P33240 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.982e-13■■■■□ 20.2
CSTF2P33240 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.18■□□□□ 0.982e-13■■■■□ 20.2
CSTF2P33240 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.94■□□□□ 0.942e-13■■■■□ 20.2
CSTF2P33240 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.32■□□□□ 0.689e-7■■■■□ 20.2
CSTF2P33240 KLC1-209ENST00000535194 710 ntTSL 319.02■□□□□ 0.642e-13■■■■□ 20.2
CSTF2P33240 KLC1-216ENST00000554228 2555 ntTSL 518.97■□□□□ 0.632e-13■■■■□ 20.2
CSTF2P33240 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.91■□□□□ 0.622e-13■■■■□ 20.2
CSTF2P33240 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.39■□□□□ 0.532e-13■■■■□ 20.2
CSTF2P33240 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.26■□□□□ 0.352e-13■■■■□ 20.2
CSTF2P33240 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.04■□□□□ 0.162e-13■■■■□ 20.2
CSTF2P33240 SUN1-226ENST00000467483 992 ntTSL 215.7■□□□□ 0.19e-7■■■■□ 20.2
CSTF2P33240 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.64■□□□□ 0.092e-13■■■■□ 20.2
CSTF2P33240 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.92□□□□□ -0.029e-7■■■■□ 20.2
CSTF2P33240 SUN1-208ENST00000421580 540 ntTSL 414.28□□□□□ -0.129e-7■■■■□ 20.2
CSTF2P33240 SUN1-211ENST00000427969 520 ntTSL 414.25□□□□□ -0.139e-7■■■■□ 20.2
CSTF2P33240 SUN1-221ENST00000457598 563 ntTSL 414.25□□□□□ -0.139e-7■■■■□ 20.2
CSTF2P33240 SUN1-217ENST00000450538 570 ntTSL 413.86□□□□□ -0.199e-7■■■■□ 20.2
CSTF2P33240 SUN1-215ENST00000439679 626 ntTSL 513.5□□□□□ -0.259e-7■■■■□ 20.2
CSTF2P33240 SUN1-201ENST00000340926 2128 ntTSL 513.49□□□□□ -0.259e-7■■■■□ 20.2
CSTF2P33240 KLC1-210ENST00000537046 875 ntTSL 313□□□□□ -0.332e-13■■■■□ 20.2
CSTF2P33240 SUN1-214ENST00000435699 676 ntTSL 311.79□□□□□ -0.529e-7■■■■□ 20.2
CSTF2P33240 SUN1-206ENST00000413171 4488 ntTSL 511.04□□□□□ -0.649e-7■■■■□ 20.2
CSTF2P33240 SUN1-202ENST00000389574 3812 ntAPPRIS P3 TSL 2 BASIC9.63□□□□□ -0.879e-7■■■■□ 20.2
CSTF2P33240 SUN1-205ENST00000405266 4062 ntTSL 5 BASIC9.31□□□□□ -0.929e-7■■■■□ 20.2
CSTF2P33240 SUN1-210ENST00000425407 3868 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.959e-7■■■■□ 20.2
CSTF2P33240 SUN1-219ENST00000452783 3717 ntTSL 2 BASIC9.07□□□□□ -0.969e-7■■■■□ 20.2
CSTF2P33240 SUN1-203ENST00000401592 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.029e-7■■■■□ 20.2
CSTF2P33240 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC8.45□□□□□ -1.062e-13■■■■□ 20.2
CSTF2P33240 MIPOL1-210ENST00000555870 7434 ntTSL 1 (best)5.9□□□□□ -1.472e-6■■■■□ 20.2
CSTF2P33240 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.552e-6■■■■□ 20.2
CSTF2P33240 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.612e-6■■■■□ 20.2
CSTF2P33240 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.86■■□□□ 1.091e-11■■■■□ 20.2
CSTF2P33240 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.911e-11■■■■□ 20.2
CSTF2P33240 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.11■□□□□ 0.811e-11■■■■□ 20.2
CSTF2P33240 LINC02008-202ENST00000494340 524 ntTSL 29.6□□□□□ -0.873e-6■■■■□ 20.2
CSTF2P33240 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.2□□□□□ -1.423e-6■■■■□ 20.2
CSTF2P33240 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -09e-7■■■■□ 20.2
CSTF2P33240 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.2□□□□□ -0.39e-7■■■■□ 20.2
CSTF2P33240 RABGAP1L-219ENST00000526253 439 ntTSL 58.42□□□□□ -1.069e-7■■■■□ 20.2
CSTF2P33240 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.219e-7■■■■□ 20.2
CSTF2P33240 PIAS1-206ENST00000564915 671 ntTSL 54.49□□□□□ -1.699e-7■■■■□ 20.2
CSTF2P33240 PIAS1-203ENST00000562190 766 ntTSL 33.73□□□□□ -1.819e-7■■■■□ 20.2
CSTF2P33240 DARS-203ENST00000435076 717 ntTSL 212.4□□□□□ -0.421e-6■■■■□ 20.2
CSTF2P33240 DARS-205ENST00000449218 543 ntTSL 37.01□□□□□ -1.291e-6■■■■□ 20.2
CSTF2P33240 DARS-207ENST00000463008 412 ntTSL 55.3□□□□□ -1.561e-6■■■■□ 20.2
CSTF2P33240 ZNF638-217ENST00000483421 2076 ntTSL 24.25□□□□□ -1.736e-7■■■■□ 20.1
CSTF2P33240 ZNF638-202ENST00000409407 4470 ntTSL 22.13□□□□□ -2.076e-7■■■■□ 20.1
CSTF2P33240 TRIM24-206ENST00000497516 1515 ntTSL 513.82□□□□□ -0.23e-12■■■■□ 20.1
CSTF2P33240 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.441e-6■■■■□ 20.1
CSTF2P33240 RPS14-202ENST00000401695 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.641e-6■■■■□ 20.1
CSTF2P33240 CTAGE5-205ENST00000348007 2762 ntTSL 1 (best) BASIC8.56□□□□□ -1.043e-6■■■■□ 20.1
CSTF2P33240 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.53□□□□□ -1.523e-6■■■■□ 20.1
CSTF2P33240 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.51□□□□□ -1.533e-6■■■■□ 20.1
CSTF2P33240 FOXN3-213ENST00000556916 467 ntTSL 33.6□□□□□ -1.834e-7■■■■□ 20.1
CSTF2P33240 HERC4-212ENST00000505760 578 ntTSL 424.5■■□□□ 1.513e-7■■■■□ 20.1
CSTF2P33240 WDFY3-204ENST00000502713 425 ntTSL 324.46■■□□□ 1.513e-7■■■■□ 20.1
CSTF2P33240 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.67■□□□□ 0.93e-7■■■■□ 20.1
CSTF2P33240 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.23■□□□□ 0.833e-7■■■■□ 20.1
CSTF2P33240 WDFY3-208ENST00000509172 453 ntTSL 318.26■□□□□ 0.513e-7■■■■□ 20.1
CSTF2P33240 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.063e-7■■■■□ 20.1
CSTF2P33240 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.31e-13■■■■□ 20.1
CSTF2P33240 DHCR7-212ENST00000534795 979 ntTSL 1 (best)13.05□□□□□ -0.323e-7■■■■□ 20.1
CSTF2P33240 ETV5-201ENST00000306376 4111 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.533e-7■■■■□ 20.1
CSTF2P33240 CTDSPL-207ENST00000447745 793 ntTSL 39.89□□□□□ -0.833e-7■■■■□ 20.1
CSTF2P33240 HERC4-214ENST00000513996 944 ntTSL 38.54□□□□□ -1.043e-7■■■■□ 20.1
CSTF2P33240 HERC4-203ENST00000395185 625 ntTSL 48.19□□□□□ -1.13e-7■■■■□ 20.1
CSTF2P33240 ETV5-213ENST00000489830 614 ntTSL 26.88□□□□□ -1.313e-7■■■■□ 20.1
Retrieved 100 of 6,735 protein–RNA pairs in 108.3 ms